Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1075

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,235,094	-				+1.2
1,235,094	-				+0.6
1,235,140	+				-1.8
1,235,154	-				-2.3
1,235,154	-				-0.1
1,235,210	+				-2.1
1,235,211	-				+1.8
1,235,211	-				+0.4
1,235,215	+				-2.3
1,235,215	+				-0.9
1,235,216	-				+1.1
1,235,293	+				+0.6
1,235,293	+				-1.3
1,235,293	+				-0.6
1,235,293	+				+1.1
1,235,294	-				+2.3
1,235,294	-				+0.7
1,235,294	-				-0.9
1,235,317	+				-0.7
1,235,371	-				+0.2
1,235,371	-				-0.5
1,235,395	-				-0.2
1,235,395	-				+0.1
1,235,571	-				-0.5
1,235,707	+				-0.5
1,235,713	+				-0.5
1,235,723	+				+0.5
1,235,723	+				+0.8
1,235,723	+				+1.1
1,235,737	+				+0.7
1,235,737	+				+1.9
1,235,737	+				+0.2
1,235,737	+				-3.3
1,235,737	+				+0.7
1,235,778	-				-0.4
1,235,833	+				-0.6
1,235,838	+				+0.5
1,235,895	+				-0.6
1,235,908	+				-0.3
1,235,908	+				+0.3
1,235,909	-				+0.2
1,235,985	+		Echvi_1074	0.29	-1.1
1,235,985	+		Echvi_1074	0.29	+0.3
1,235,985	+		Echvi_1074	0.29	+0.0
1,235,985	+		Echvi_1074	0.29	+1.9
1,235,985	+		Echvi_1074	0.29	+1.1
1,235,986	-		Echvi_1074	0.30	+0.4
1,235,986	-		Echvi_1074	0.30	-0.1
1,235,987	+		Echvi_1074	0.30	-1.3
1,235,987	+		Echvi_1074	0.30	-1.3
1,235,987	+		Echvi_1074	0.30	-0.2
1,235,988	-		Echvi_1074	0.31	-2.5
1,236,004	-		Echvi_1074	0.43	-0.4
1,236,020	+		Echvi_1074	0.55	+0.0
1,236,021	-		Echvi_1074	0.56	-2.6
1,236,047	+		Echvi_1074	0.75	-0.4
1,236,048	-		Echvi_1074	0.76	-0.4
1,236,089	-				+0.6
1,236,095	+				-1.5
1,236,095	+				+0.1
1,236,096	-				+0.2
1,236,144	+		Echvi_1075	0.15	+0.9
1,236,145	-		Echvi_1075	0.15	+0.6
1,236,154	+		Echvi_1075	0.17	-0.1
1,236,169	+		Echvi_1075	0.20	+0.2
1,236,170	-		Echvi_1075	0.20	+0.6
1,236,195	+		Echvi_1075	0.26	-1.0
1,236,195	+		Echvi_1075	0.26	+0.1
1,236,196	-		Echvi_1075	0.26	-0.5
1,236,196	-		Echvi_1075	0.26	+1.0
1,236,196	-		Echvi_1075	0.26	-0.5
1,236,196	-		Echvi_1075	0.26	+0.7
1,236,199	+		Echvi_1075	0.26	+0.0
1,236,199	+		Echvi_1075	0.26	+0.0
1,236,199	+		Echvi_1075	0.26	+0.4
1,236,199	+		Echvi_1075	0.26	+0.9
1,236,200	-		Echvi_1075	0.27	+0.4
1,236,202	-		Echvi_1075	0.27	+0.1
1,236,213	-		Echvi_1075	0.29	-1.8
1,236,337	+		Echvi_1075	0.56	-0.8
1,236,338	-		Echvi_1075	0.56	-1.9
1,236,338	-		Echvi_1075	0.56	+0.6
1,236,343	+		Echvi_1075	0.58	+0.9
1,236,343	+		Echvi_1075	0.58	-1.0
1,236,344	-		Echvi_1075	0.58	+0.3
1,236,354	-		Echvi_1075	0.60	-0.2
1,236,373	+		Echvi_1075	0.64	-0.5
1,236,373	+		Echvi_1075	0.64	+0.3
1,236,374	-		Echvi_1075	0.64	+0.1
1,236,392	+		Echvi_1075	0.68	-0.1
1,236,392	+		Echvi_1075	0.68	-1.4
1,236,392	+		Echvi_1075	0.68	+0.8
1,236,393	-		Echvi_1075	0.68	-1.3
1,236,407	-		Echvi_1075	0.71	+0.7
1,236,407	-		Echvi_1075	0.71	+0.5
1,236,421	+		Echvi_1075	0.74	-2.4
1,236,437	+		Echvi_1075	0.78	-0.3
1,236,466	+		Echvi_1075	0.84	-0.9
1,236,473	-		Echvi_1075	0.86	+1.1
1,236,473	-		Echvi_1075	0.86	-1.5
1,236,501	-				-0.4
1,236,525	+				-0.5
1,236,525	+				+0.4
1,236,526	-				+1.5
1,236,529	+				-0.6
1,236,529	+				-2.1
1,236,530	-				+0.2
1,236,530	-				-1.1
1,236,530	-				-0.6
1,236,530	-				+1.8
1,236,545	-				+1.2
1,236,549	+				+0.4
1,236,555	-				+0.2
1,236,578	-				+1.0
1,236,583	+				-0.1
1,236,584	-				-1.8
1,236,653	-				-0.2
1,236,653	-				-1.2
1,236,658	-				+1.7
1,236,658	-				+1.8
1,236,672	+				+1.9
1,236,673	-				-0.0
1,236,673	-				+0.5
1,236,675	+				-0.7
1,236,676	-				+0.6
1,236,678	-				-0.2
1,236,678	-				+0.1
1,236,708	+				-0.1
1,236,725	-				+1.1
1,236,957	+				+0.7
1,237,036	+				-0.3
1,237,093	-				+1.7
1,237,197	-				-0.7
1,237,210	-				+0.5
1,237,235	+				+0.2
1,237,235	+				+0.7
1,237,235	+				-0.5
1,237,236	-				-0.7
1,237,236	-				+0.7
1,237,236	-				+0.3
1,237,268	+				-0.2
1,237,295	+				+0.1
1,237,296	-				+0.4
1,237,300	-				-0.3
1,237,342	+				+0.1
1,237,342	+				-0.4
1,237,383	+				-0.8
1,237,383	+				-0.9
1,237,383	+				+0.0
1,237,383	+				-1.3
1,237,384	-				-2.4
1,237,384	-				+0.7
1,237,384	-				-0.9
1,237,389	+				+3.7
1,237,390	-				+1.5
1,237,390	-				-0.3
1,237,401	-				-0.4
1,237,415	+				+0.3
1,237,415	+				-0.4
1,237,416	-				-0.8
1,237,444	+				-1.2
1,237,444	+				-0.4
1,237,444	+				-1.3
1,237,458	-				+0.2
1,237,472	+				+0.0
1,237,473	-				+2.3
1,237,484	-				+0.5
1,237,510	-				-0.9