Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1060

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,219,179	+		Echvi_1059	0.64	+3.3
1,219,844	+				-1.6
1,219,844	+				+0.8
1,219,845	-				-0.1
1,219,845	-				-0.9
1,219,851	+				+0.2
1,219,899	-				+1.7
1,219,899	-				-0.7
1,219,904	+				+1.2
1,219,904	+				+1.4
1,219,905	-				+1.1
1,219,905	-				-0.5
1,219,913	-				+0.5
1,219,943	+		Echvi_1060	0.11	+1.6
1,219,946	+		Echvi_1060	0.11	+0.6
1,219,959	-		Echvi_1060	0.12	+0.5
1,219,982	+		Echvi_1060	0.15	+0.6
1,220,006	+		Echvi_1060	0.18	+2.6
1,220,007	-		Echvi_1060	0.18	-0.3
1,220,016	+		Echvi_1060	0.19	-0.3
1,220,019	+		Echvi_1060	0.19	+0.6
1,220,034	+		Echvi_1060	0.21	-1.0
1,220,036	+		Echvi_1060	0.21	+1.3
1,220,036	+		Echvi_1060	0.21	+0.4
1,220,037	-		Echvi_1060	0.21	-1.4
1,220,037	-		Echvi_1060	0.21	+1.3
1,220,076	-		Echvi_1060	0.26	+0.8
1,220,077	+		Echvi_1060	0.26	+0.1
1,220,130	-		Echvi_1060	0.32	+0.6
1,220,193	+		Echvi_1060	0.39	-0.9
1,220,193	+		Echvi_1060	0.39	+0.2
1,220,283	+		Echvi_1060	0.49	+0.6
1,220,347	+		Echvi_1060	0.56	+0.3
1,220,347	+		Echvi_1060	0.56	+0.7
1,220,348	-		Echvi_1060	0.56	+0.8
1,220,348	-		Echvi_1060	0.56	+0.3
1,220,411	+		Echvi_1060	0.63	+0.9
1,220,412	-		Echvi_1060	0.64	+0.6
1,220,412	-		Echvi_1060	0.64	+0.2
1,220,416	+		Echvi_1060	0.64	+0.6
1,220,416	+		Echvi_1060	0.64	+0.3
1,220,416	+		Echvi_1060	0.64	+1.4
1,220,418	+		Echvi_1060	0.64	-0.8
1,220,419	-		Echvi_1060	0.64	+1.1
1,220,423	-		Echvi_1060	0.65	+0.8
1,220,423	-		Echvi_1060	0.65	-1.9
1,220,458	+		Echvi_1060	0.69	+0.2
1,220,458	+		Echvi_1060	0.69	+0.8
1,220,458	+		Echvi_1060	0.69	+0.8
1,220,462	+		Echvi_1060	0.69	+0.5
1,220,483	-		Echvi_1060	0.72	+3.2
1,220,483	-		Echvi_1060	0.72	-1.4
1,220,488	+		Echvi_1060	0.72	-0.2
1,220,488	+		Echvi_1060	0.72	+0.6
1,220,488	+		Echvi_1060	0.72	+0.2
1,220,489	-		Echvi_1060	0.72	-0.4
1,220,489	-		Echvi_1060	0.72	+0.2
1,220,489	-		Echvi_1060	0.72	+2.3
1,220,544	+		Echvi_1060	0.78	+0.3
1,220,545	-		Echvi_1060	0.78	+0.6
1,220,561	-		Echvi_1060	0.80	+0.8
1,220,586	-		Echvi_1060	0.83	+0.5
1,220,586	-		Echvi_1060	0.83	+1.5
1,220,593	-		Echvi_1060	0.84	+1.1
1,220,593	-		Echvi_1060	0.84	+0.3
1,220,618	-		Echvi_1060	0.87	+0.7
1,220,700	+				-2.6
1,220,701	-				+0.9
1,220,710	+				-0.2
1,220,710	+				+0.6
1,220,717	+				+0.2
1,220,752	+				+2.5
1,220,905	-				+0.2
1,220,924	+		Echvi_1061	0.11	-0.0
1,221,152	-		Echvi_1061	0.24	-0.3
1,221,180	-		Echvi_1061	0.26	-1.6
1,221,231	-		Echvi_1061	0.29	-1.3