Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1042

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,202,694	+		Echvi_1041	0.46	-1.3
1,202,694	+		Echvi_1041	0.46	-1.7
1,202,716	+		Echvi_1041	0.47	-0.5
1,202,716	+		Echvi_1041	0.47	+0.4
1,202,717	-		Echvi_1041	0.47	-2.1
1,202,717	-		Echvi_1041	0.47	+0.1
1,202,736	+		Echvi_1041	0.48	-0.5
1,202,736	+		Echvi_1041	0.48	+0.1
1,202,736	+		Echvi_1041	0.48	-0.3
1,202,736	+		Echvi_1041	0.48	+0.0
1,202,737	-		Echvi_1041	0.49	+1.4
1,202,737	-		Echvi_1041	0.49	-0.5
1,202,792	+		Echvi_1041	0.52	-2.0
1,202,793	-		Echvi_1041	0.52	-0.3
1,202,793	-		Echvi_1041	0.52	+0.4
1,202,793	-		Echvi_1041	0.52	-0.4
1,202,793	-		Echvi_1041	0.52	+0.4
1,202,797	+		Echvi_1041	0.52	-0.9
1,202,797	+		Echvi_1041	0.52	-1.6
1,202,798	-		Echvi_1041	0.52	-1.2
1,202,920	-		Echvi_1041	0.60	-1.1
1,202,920	-		Echvi_1041	0.60	-1.2
1,203,011	-		Echvi_1041	0.66	+1.5
1,203,012	+		Echvi_1041	0.66	+1.7
1,203,012	+		Echvi_1041	0.66	+2.0
1,203,012	+		Echvi_1041	0.66	-0.3
1,203,012	+		Echvi_1041	0.66	+0.2
1,203,012	+		Echvi_1041	0.66	+0.5
1,203,012	+		Echvi_1041	0.66	-0.4
1,203,013	-		Echvi_1041	0.66	-0.2
1,203,013	-		Echvi_1041	0.66	-0.3
1,203,013	-		Echvi_1041	0.66	+0.4
1,203,013	-		Echvi_1041	0.66	-1.4
1,203,017	+		Echvi_1041	0.66	-0.3
1,203,017	+		Echvi_1041	0.66	-1.5
1,203,018	-		Echvi_1041	0.67	+0.2
1,203,018	-		Echvi_1041	0.67	-1.0
1,203,072	+		Echvi_1041	0.70	-0.7
1,203,136	+		Echvi_1041	0.74	-0.2
1,203,137	-		Echvi_1041	0.74	-0.5
1,203,148	+		Echvi_1041	0.75	+0.1
1,203,149	-		Echvi_1041	0.75	-0.5
1,203,149	-		Echvi_1041	0.75	+0.5
1,203,149	-		Echvi_1041	0.75	+0.3
1,203,223	-		Echvi_1041	0.80	-0.0
1,203,223	-		Echvi_1041	0.80	+0.7
1,203,223	-		Echvi_1041	0.80	-0.2
1,203,316	+		Echvi_1041	0.86	-0.6
1,203,316	+		Echvi_1041	0.86	-1.6
1,203,316	+		Echvi_1041	0.86	-0.3
1,203,316	+		Echvi_1041	0.86	+0.7
1,203,316	+		Echvi_1041	0.86	-0.7
1,203,317	-		Echvi_1041	0.86	+1.1
1,203,317	-		Echvi_1041	0.86	-0.7
1,203,317	-		Echvi_1041	0.86	+1.1
1,203,317	-		Echvi_1041	0.86	-0.4
1,203,317	-		Echvi_1041	0.86	-2.2
1,203,317	-		Echvi_1041	0.86	-0.1
1,203,317	-		Echvi_1041	0.86	+1.3
1,203,317	-		Echvi_1041	0.86	+0.0
1,203,317	-		Echvi_1041	0.86	-1.8
1,203,317	-		Echvi_1041	0.86	+1.0
1,203,317	-		Echvi_1041	0.86	-0.1
1,203,319	-		Echvi_1041	0.86	-0.1
1,203,319	-				+3.3
1,203,328	+		Echvi_1041	0.86	-0.4
1,203,329	-		Echvi_1041	0.86	+1.3
1,203,340	+		Echvi_1041	0.87	-0.0
1,203,340	+		Echvi_1041	0.87	-1.5
1,203,341	-		Echvi_1041	0.87	-1.9
1,203,341	-		Echvi_1041	0.87	-0.5
1,203,356	-		Echvi_1041	0.88	+0.0
1,203,356	-		Echvi_1041	0.88	+0.5
1,203,356	-		Echvi_1041	0.88	-0.4
1,203,357	+		Echvi_1041	0.88	-0.9
1,203,357	+		Echvi_1041	0.88	-0.7
1,203,358	-		Echvi_1041	0.88	-0.0
1,203,358	-		Echvi_1041	0.88	+2.0
1,203,358	-		Echvi_1041	0.88	+0.1
1,203,358	-		Echvi_1041	0.88	+0.0
1,203,417	+				-0.3
1,203,418	-				-2.4
1,203,492	+				+0.3
1,203,493	-				+0.0
1,203,493	-				-1.1
1,203,493	-				+1.9
1,203,493	-				+0.1
1,203,552	+				+0.3
1,203,574	+				-0.2
1,203,574	+				-0.6
1,203,575	-				+0.9
1,203,617	-				+0.5
1,203,617	-				-0.0
1,203,617	-				+0.6
1,203,617	-				-0.6
1,203,619	-				+0.7
1,203,621	+				-0.9
1,203,632	+				+0.4
1,203,634	+				-0.0
1,203,634	+				-1.6
1,203,634	+				+0.6
1,203,634	+				-0.9
1,203,634	+				-0.3
1,203,635	-				-0.0
1,203,635	-				-0.3
1,203,635	-				-0.8
1,203,655	-				-3.0
1,203,678	+				-3.8
1,203,678	+				-1.2
1,203,678	+				+0.6
1,203,678	+				+0.7
1,203,679	-				+1.2
1,203,746	+		Echvi_1042	0.55	-0.1
1,203,746	+		Echvi_1042	0.55	+0.1
1,203,775	+		Echvi_1042	0.78	-2.7
1,203,775	+		Echvi_1042	0.78	-0.7
1,203,803	+				-1.5
1,203,803	+				-0.9
1,203,848	+				+0.1
1,203,849	-				+2.1
1,203,849	-				-1.3
1,203,852	+				-2.1
1,203,853	-				+0.3
1,203,947	+				-0.6
1,203,947	+				-0.4
1,203,948	-				-0.7
1,203,968	-				+1.9
1,203,968	-				-0.4
1,203,968	-				+1.1
1,203,968	-				-0.2
1,204,036	+		Echvi_1043	0.16	-2.3
1,204,047	+		Echvi_1043	0.17	-0.4
1,204,047	+		Echvi_1043	0.17	+2.1
1,204,048	-		Echvi_1043	0.18	-0.7
1,204,109	+		Echvi_1043	0.28	-1.3
1,204,110	-		Echvi_1043	0.29	-0.6
1,204,150	+		Echvi_1043	0.36	-3.6
1,204,151	-		Echvi_1043	0.36	+0.5
1,204,151	-		Echvi_1043	0.36	-1.3
1,204,151	-		Echvi_1043	0.36	+0.5
1,204,239	+		Echvi_1043	0.51	-0.5
1,204,241	+		Echvi_1043	0.52	-0.5
1,204,242	-		Echvi_1043	0.52	-0.9
1,204,399	-		Echvi_1043	0.80	+0.3
1,204,399	-		Echvi_1043	0.80	-0.6
1,204,403	-		Echvi_1043	0.80	+0.7
1,204,413	+		Echvi_1043	0.82	-0.4
1,204,414	-		Echvi_1043	0.82	-0.4
1,204,417	+		Echvi_1043	0.83	-3.1
1,204,417	+		Echvi_1043	0.83	-1.3
1,204,417	+		Echvi_1043	0.83	+2.3
1,204,417	+		Echvi_1043	0.83	-0.5
1,204,418	-		Echvi_1043	0.83	+0.3
1,204,418	-		Echvi_1043	0.83	-0.0
1,204,418	-		Echvi_1043	0.83	+0.8
1,204,418	-		Echvi_1043	0.83	+0.4
1,204,418	-		Echvi_1043	0.83	+1.2
1,204,418	-		Echvi_1043	0.83	-0.1
1,204,418	-		Echvi_1043	0.83	+1.0
1,204,502	+				+1.4
1,204,524	-				-0.7
1,204,559	+				-1.0
1,204,560	-				+0.4
1,204,560	-				-0.7
1,204,659	+				+0.6
1,204,660	-				-0.3
1,204,660	-				-0.6
1,204,666	+				+1.6
1,204,667	-				+0.3
1,204,680	+		Echvi_1044	0.10	+0.8
1,204,680	+		Echvi_1044	0.10	+0.5
1,204,716	-		Echvi_1044	0.12	+1.3