Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0990

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,147,684	+				-0.1
1,147,684	+				-0.4
1,147,712	+				+0.6
1,147,716	+				-1.2
1,147,716	+				+0.2
1,147,739	+				-0.6
1,147,739	+				-0.2
1,147,740	-				+1.1
1,147,740	-				-0.1
1,147,782	+				-0.0
1,147,782	+				+0.6
1,147,783	-				+0.5
1,147,784	+				-0.2
1,147,784	+				+0.1
1,147,784	+				+1.7
1,147,784	+				-0.2
1,147,784	+				+0.7
1,147,784	+				+0.6
1,147,785	-				-0.3
1,147,785	-				-0.1
1,147,785	-				-1.3
1,147,822	-				+0.9
1,147,865	+				-0.6
1,147,866	-				-0.2
1,147,922	+				+0.4
1,147,953	+				+0.3
1,147,953	+				-0.1
1,147,956	+				-0.8
1,147,999	+		Echvi_0989	0.14	+1.3
1,148,005	-		Echvi_0989	0.16	-0.6
1,148,032	+		Echvi_0989	0.24	-0.8
1,148,049	+		Echvi_0989	0.29	-1.7
1,148,050	-		Echvi_0989	0.29	+0.6
1,148,052	+		Echvi_0989	0.29	+1.6
1,148,053	-		Echvi_0989	0.30	-0.1
1,148,053	-		Echvi_0989	0.30	-2.0
1,148,079	+		Echvi_0989	0.37	-1.6
1,148,080	+		Echvi_0989	0.38	-1.3
1,148,080	+		Echvi_0989	0.38	-2.3
1,148,081	-		Echvi_0989	0.38	+1.2
1,148,081	-		Echvi_0989	0.38	+0.2
1,148,081	-		Echvi_0989	0.38	+0.1
1,148,081	-		Echvi_0989	0.38	+0.1
1,148,082	+		Echvi_0989	0.38	+0.2
1,148,213	-		Echvi_0989	0.77	-1.6
1,148,252	-		Echvi_0989	0.88	-1.5
1,148,267	+				-0.5
1,148,268	-				+1.4
1,148,321	+				+3.3
1,148,324	+				+1.3
1,148,324	+				+0.7
1,148,324	+				-0.6
1,148,361	+				+1.4
1,148,413	-				-0.4
1,148,413	-				-3.5
1,148,432	+				+0.3
1,148,435	+				-0.4
1,148,435	+				+0.7
1,148,443	+				+0.0
1,148,479	-				-0.1
1,148,500	+				-0.2
1,148,501	-				-0.5
1,148,501	-				-0.3
1,148,634	+				-0.1
1,148,635	-				-0.3
1,148,638	+				-1.7
1,148,638	+				-1.1
1,148,639	-				-0.5
1,148,639	-				+0.1
1,148,703	+				+0.6
1,148,703	+				-1.3
1,148,703	+				-0.7
1,148,703	+				-0.9
1,148,703	+				+0.0
1,148,703	+				-1.0
1,148,703	+				-0.8
1,148,703	+				+0.1
1,148,704	-				+0.7
1,148,704	-				-1.4
1,148,704	-				-0.3
1,148,879	+		Echvi_0990	0.37	+0.8
1,148,879	+		Echvi_0990	0.37	+2.0
1,148,880	-		Echvi_0990	0.37	+0.4
1,148,880	-		Echvi_0990	0.37	+1.3
1,148,881	+		Echvi_0990	0.38	+1.5
1,149,038	+		Echvi_0990	0.65	+0.7
1,149,039	-		Echvi_0990	0.65	+1.2
1,149,050	+		Echvi_0990	0.67	-1.1
1,149,050	+		Echvi_0990	0.67	-1.2
1,149,051	-		Echvi_0990	0.67	-2.0
1,149,051	-		Echvi_0990	0.67	+0.8
1,149,051	-		Echvi_0990	0.67	+0.6
1,149,110	+		Echvi_0990	0.77	-0.3
1,149,110	+		Echvi_0990	0.77	+1.2
1,149,110	+		Echvi_0990	0.77	-2.1
1,149,154	+		Echvi_0990	0.85	+1.0
1,149,157	+		Echvi_0990	0.86	-0.6
1,149,158	-		Echvi_0990	0.86	-0.8
1,149,220	-				+1.1
1,149,237	-				+0.3
1,149,252	-				-0.5
1,149,296	+				+2.3
1,149,296	+				-0.2
1,149,297	-				+0.1
1,149,297	-				-0.9
1,149,303	+				-1.6
1,149,304	-				-1.4
1,149,306	+				-0.1
1,149,306	+				+1.6
1,149,306	+				-0.2
1,149,306	+				+0.3
1,149,306	+				+1.4
1,149,307	-				+0.8
1,149,323	+				-0.5
1,149,323	+				+0.2
1,149,323	+				+0.7
1,149,323	+				-1.4
1,149,324	-				-0.1
1,149,343	+				-0.6
1,149,422	-				+0.2
1,149,434	-				+1.3
1,149,434	-				-1.3
1,149,434	-				+0.6
1,149,438	-				-1.2
1,149,454	-				-0.3
1,149,454	-				-0.2
1,149,454	-				-0.5
1,149,454	-				+0.2
1,149,454	-				-1.3
1,149,454	-				-0.5
1,149,668	-				+0.6
1,149,668	-				+1.7
1,149,668	-				+2.2
1,149,668	-				-0.4
1,149,670	-				-0.1
1,149,670	-				+0.2
1,149,707	+				+0.3
1,150,026	-				+0.5
1,150,042	-				-0.8
1,150,042	-				-1.0
1,150,042	-				+1.0
1,150,042	-				-0.5