Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0987

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,143,310	-		Echvi_0985	0.27	-0.0
1,143,310	-		Echvi_0985	0.27	+0.6
1,143,310	-		Echvi_0985	0.27	-0.2
1,143,310	-		Echvi_0985	0.27	+0.3
1,143,310	-		Echvi_0985	0.27	-0.8
1,143,362	-		Echvi_0985	0.48	-0.5
1,143,362	-		Echvi_0985	0.48	+0.9
1,143,427	-		Echvi_0985	0.75	-0.4
1,143,427	-		Echvi_0985	0.75	-0.6
1,143,498	-				+0.3
1,143,690	-		Echvi_0986	0.28	-0.6
1,143,698	-		Echvi_0986	0.30	+1.1
1,143,742	+		Echvi_0986	0.40	+2.1
1,143,743	-		Echvi_0986	0.40	+1.8
1,143,785	+		Echvi_0986	0.49	+1.9
1,143,786	-		Echvi_0986	0.49	+1.2
1,143,788	+		Echvi_0986	0.50	+0.9
1,143,899	-		Echvi_0986	0.74	+2.5
1,143,904	+		Echvi_0986	0.75	+1.7
1,143,936	-		Echvi_0986	0.83	+1.3
1,143,936	-		Echvi_0986	0.83	+0.7
1,143,936	-		Echvi_0986	0.83	+1.5
1,144,047	-				-2.3
1,144,069	+				-1.4
1,144,098	+				+0.2
1,144,108	+				+1.2
1,144,113	+				+0.7
1,144,148	-				+1.3
1,144,148	-				+1.2
1,144,177	+				-1.2
1,144,178	-				+0.3
1,144,178	-				-1.8
1,144,178	-				-0.4
1,144,195	+				-1.6
1,144,195	+				-0.3
1,144,195	+				+1.4
1,144,195	+				+0.2
1,144,199	-				+0.8
1,144,199	-				-0.6
1,144,219	-				+0.2
1,144,226	+				-0.9
1,144,227	-				+2.3
1,144,285	+				+0.8
1,144,286	-				+1.4
1,144,289	-				-1.3
1,144,289	-				+1.2
1,144,289	-				-0.2
1,144,483	+				-0.6
1,144,483	+				-1.3
1,144,484	-				-0.9
1,144,505	-		Echvi_0987	0.10	-0.4
1,144,619	-		Echvi_0987	0.17	-1.0
1,144,619	-		Echvi_0987	0.17	-2.5
1,144,619	-		Echvi_0987	0.17	-0.4
1,144,619	-		Echvi_0987	0.17	-1.0
1,144,619	-		Echvi_0987	0.17	-1.3
1,144,755	-		Echvi_0987	0.24	-1.7
1,144,809	+		Echvi_0987	0.27	-0.6
1,144,825	+		Echvi_0987	0.27	-1.5
1,144,826	-		Echvi_0987	0.27	+1.1
1,144,856	+		Echvi_0987	0.29	+1.1
1,144,857	-		Echvi_0987	0.29	-1.0
1,144,882	+		Echvi_0987	0.30	+2.5
1,144,883	-		Echvi_0987	0.31	-1.8
1,144,905	+		Echvi_0987	0.32	+0.8
1,144,927	-		Echvi_0987	0.33	-0.1
1,144,957	+		Echvi_0987	0.34	+0.0
1,145,005	+		Echvi_0987	0.37	+1.3
1,145,012	+		Echvi_0987	0.37	+1.1
1,145,032	+		Echvi_0987	0.38	-3.2
1,145,131	+		Echvi_0987	0.44	+0.7
1,145,132	-		Echvi_0987	0.44	-0.0
1,145,132	-		Echvi_0987	0.44	-0.3
1,145,132	-		Echvi_0987	0.44	-1.3
1,145,132	-		Echvi_0987	0.44	-1.3
1,145,271	+		Echvi_0987	0.51	-2.0
1,145,271	+		Echvi_0987	0.51	+0.1
1,145,271	+		Echvi_0987	0.51	-0.3
1,145,272	-		Echvi_0987	0.51	-2.6
1,145,338	+		Echvi_0987	0.55	-1.1
1,145,338	+		Echvi_0987	0.55	+0.6
1,145,339	-		Echvi_0987	0.55	-1.4
1,145,340	+		Echvi_0987	0.55	+0.2
1,145,352	-		Echvi_0987	0.55	+0.2
1,145,352	-		Echvi_0987	0.55	+0.3
1,145,365	+		Echvi_0987	0.56	+0.7
1,145,366	-		Echvi_0987	0.56	-0.5
1,145,370	+		Echvi_0987	0.56	+1.4
1,145,370	+		Echvi_0987	0.56	-1.1
1,145,371	-		Echvi_0987	0.56	-2.6
1,145,371	-		Echvi_0987	0.56	+0.2
1,145,423	+		Echvi_0987	0.59	+1.0
1,145,425	+		Echvi_0987	0.59	-2.2
1,145,475	+		Echvi_0987	0.62	-1.0
1,145,475	+		Echvi_0987	0.62	-0.3
1,145,477	+		Echvi_0987	0.62	-1.8
1,145,477	+		Echvi_0987	0.62	-0.8
1,145,478	-		Echvi_0987	0.62	-2.1
1,145,478	-		Echvi_0987	0.62	-0.7
1,145,505	+		Echvi_0987	0.64	+1.3
1,145,506	-		Echvi_0987	0.64	+0.7
1,145,520	-		Echvi_0987	0.64	-0.8
1,145,520	-		Echvi_0987	0.64	-0.2
1,145,521	+		Echvi_0987	0.64	-2.7
1,145,603	+		Echvi_0987	0.69	-1.4
1,145,604	-		Echvi_0987	0.69	-1.7
1,145,608	+		Echvi_0987	0.69	-2.8
1,145,608	+		Echvi_0987	0.69	-2.0
1,145,609	-		Echvi_0987	0.69	+2.7
1,145,669	+		Echvi_0987	0.72	-2.1
1,145,773	+		Echvi_0987	0.78	-2.5
1,145,821	+		Echvi_0987	0.80	-0.8
1,145,822	-		Echvi_0987	0.80	-0.3
1,145,874	-		Echvi_0987	0.83	+0.3
1,145,883	+		Echvi_0987	0.84	-1.2
1,145,923	+		Echvi_0987	0.86	-0.2
1,145,923	+		Echvi_0987	0.86	+0.3
1,145,923	+		Echvi_0987	0.86	+0.2
1,145,923	+		Echvi_0987	0.86	-0.4
1,145,924	-		Echvi_0987	0.86	-1.1
1,145,924	-		Echvi_0987	0.86	+0.2
1,145,948	+		Echvi_0987	0.87	-0.2
1,145,948	+		Echvi_0987	0.87	-1.2
1,145,949	-		Echvi_0987	0.87	+0.2
1,146,034	+				-0.7
1,146,034	+				-2.5
1,146,035	-				+0.2
1,146,048	-				-0.7
1,146,072	-				-2.5
1,146,091	-				+0.2
1,146,102	+				-2.1
1,146,152	+				+0.9
1,146,191	+				-1.1
1,146,191	+				-1.1
1,146,191	+				-0.8
1,146,195	+				-0.1
1,146,195	+				-1.9
1,146,195	+				-0.4
1,146,195	+				-0.2
1,146,195	+				-0.5
1,146,196	-				-1.8
1,146,196	-				+0.7
1,146,196	-				-0.0
1,146,196	-				+0.3
1,146,239	+				-0.3
1,146,344	-				+0.3
1,146,364	+				+0.6
1,146,391	+				-1.1
1,146,475	+				-0.6
1,146,476	-				-0.4
1,146,480	+				-1.2
1,146,481	-				-2.2
1,146,504	-				-2.0
1,146,636	+		Echvi_0988	0.18	+1.2
1,146,684	-		Echvi_0988	0.24	-0.4
1,146,716	+		Echvi_0988	0.28	-2.2
1,146,764	+		Echvi_0988	0.34	-1.5
1,146,871	+		Echvi_0988	0.47	+0.9
1,146,871	+		Echvi_0988	0.47	-0.1
1,146,889	+		Echvi_0988	0.49	+0.4
1,146,920	+		Echvi_0988	0.53	+1.3
1,146,921	-		Echvi_0988	0.53	-0.6
1,146,921	-		Echvi_0988	0.53	-0.4
1,146,921	-		Echvi_0988	0.53	+0.1
1,146,922	+		Echvi_0988	0.53	+0.6
1,146,923	-		Echvi_0988	0.54	+1.6
1,146,923	-		Echvi_0988	0.54	+0.9
1,146,923	-		Echvi_0988	0.54	+1.7
1,146,951	+		Echvi_0988	0.57	+0.9
1,146,951	+		Echvi_0988	0.57	-1.4
1,146,951	+		Echvi_0988	0.57	-0.6
1,146,963	+		Echvi_0988	0.59	+0.0
1,146,963	+		Echvi_0988	0.59	+0.9
1,146,963	+		Echvi_0988	0.59	-0.1
1,146,964	-		Echvi_0988	0.59	+0.3
1,146,964	-		Echvi_0988	0.59	-0.4
1,146,965	+		Echvi_0988	0.59	-0.3
1,146,965	+		Echvi_0988	0.59	-0.2
1,146,965	+		Echvi_0988	0.59	-0.3
1,146,965	+		Echvi_0988	0.59	+1.3
1,146,966	-		Echvi_0988	0.59	-0.2
1,147,081	+		Echvi_0988	0.73	+1.4
1,147,081	+		Echvi_0988	0.73	-0.1
1,147,082	-		Echvi_0988	0.73	-2.0
1,147,088	-		Echvi_0988	0.74	-1.1
1,147,100	+		Echvi_0988	0.76	+0.4
1,147,119	+		Echvi_0988	0.78	+0.0
1,147,120	-		Echvi_0988	0.78	+0.3
1,147,120	-		Echvi_0988	0.78	+0.3
1,147,120	-		Echvi_0988	0.78	+2.7
1,147,120	-		Echvi_0988	0.78	-1.8
1,147,156	+		Echvi_0988	0.83	+0.2