Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0968

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,119,302	-		Echvi_0967	0.56	+2.6
1,119,486	+		Echvi_0967	0.69	+0.4
1,119,566	+		Echvi_0967	0.75	-1.4
1,119,566	+		Echvi_0967	0.75	+1.2
1,119,571	+		Echvi_0967	0.75	-1.4
1,119,573	+		Echvi_0967	0.75	+2.8
1,119,573	+		Echvi_0967	0.75	+0.0
1,119,573	+		Echvi_0967	0.75	-0.4
1,119,574	-		Echvi_0967	0.75	-0.3
1,119,574	-		Echvi_0967	0.75	+0.2
1,119,574	-		Echvi_0967	0.75	-0.2
1,119,585	-		Echvi_0967	0.76	+0.8
1,119,592	+		Echvi_0967	0.76	-0.2
1,119,627	+		Echvi_0967	0.79	-0.7
1,119,641	-		Echvi_0967	0.80	-0.7
1,119,708	+		Echvi_0967	0.84	-1.1
1,119,753	-		Echvi_0967	0.87	+0.5
1,119,757	+		Echvi_0967	0.88	-1.4
1,119,757	+		Echvi_0967	0.88	-0.3
1,119,759	+		Echvi_0967	0.88	-0.8
1,119,796	+				+1.0
1,119,797	-				-1.6
1,119,850	+				+1.2
1,119,850	+				+2.5
1,119,851	-				+0.2
1,119,857	-				-1.9
1,119,857	-				+0.2
1,119,868	+				+0.4
1,119,947	+				-0.8
1,119,974	-				-1.2
1,120,176	+				-0.2
1,120,177	-				-0.0
1,120,235	-				+0.9
1,120,327	+				+1.0
1,120,327	+				+0.3
1,120,327	+				+2.9
1,120,327	+				-3.4
1,120,328	-				-0.1
1,120,328	-				-1.3
1,120,328	-				-0.5
1,120,331	+				-2.0
1,120,331	+				+0.3
1,120,331	+				-0.4
1,120,331	+				-0.2
1,120,332	-				+0.3
1,120,420	-		Echvi_0968	0.11	-1.5
1,120,471	+		Echvi_0968	0.15	-0.2
1,120,472	-		Echvi_0968	0.15	+0.3
1,120,478	+		Echvi_0968	0.15	+1.8
1,120,479	-		Echvi_0968	0.15	+0.4
1,120,481	-		Echvi_0968	0.15	-1.9
1,120,566	+		Echvi_0968	0.22	-0.2
1,120,566	+		Echvi_0968	0.22	+1.0
1,120,619	+		Echvi_0968	0.26	-2.8
1,120,620	-		Echvi_0968	0.26	-1.6
1,120,620	-		Echvi_0968	0.26	+0.6
1,120,726	-		Echvi_0968	0.34	+0.0
1,120,726	-		Echvi_0968	0.34	+0.5
1,120,769	+		Echvi_0968	0.37	-0.8
1,120,770	-		Echvi_0968	0.37	+0.2
1,120,770	-		Echvi_0968	0.37	+0.3
1,120,844	+		Echvi_0968	0.42	-2.0
1,120,845	-		Echvi_0968	0.42	-1.1
1,120,845	-		Echvi_0968	0.42	-3.8
1,120,845	-		Echvi_0968	0.42	+1.3
1,120,871	+		Echvi_0968	0.44	-1.9
1,120,871	+		Echvi_0968	0.44	+0.3
1,120,871	+		Echvi_0968	0.44	-1.5
1,120,871	+		Echvi_0968	0.44	-1.4
1,120,872	-		Echvi_0968	0.44	-1.0
1,120,873	+		Echvi_0968	0.44	-0.9
1,120,954	-		Echvi_0968	0.51	-0.7
1,120,984	-		Echvi_0968	0.53	-1.5
1,121,018	+		Echvi_0968	0.55	-1.7
1,121,069	+		Echvi_0968	0.59	-2.2
1,121,084	+		Echvi_0968	0.60	-0.2
1,121,084	+		Echvi_0968	0.60	-2.3
1,121,084	+		Echvi_0968	0.60	-1.3
1,121,085	-		Echvi_0968	0.60	-2.2
1,121,085	-		Echvi_0968	0.60	-1.3
1,121,090	-		Echvi_0968	0.61	-2.1
1,121,316	-		Echvi_0968	0.77	-1.3
1,121,369	-		Echvi_0968	0.81	-1.2
1,121,521	+				-2.6
1,121,598	+				-1.2
1,121,598	+				-1.2
1,121,645	-				-1.2
1,121,658	+				-2.7
1,121,658	+				+0.2
1,121,658	+				-1.1
1,121,659	-				+0.3
1,121,659	-				-0.3
1,121,659	-				-3.0
1,121,898	+				+0.8
1,121,915	-				+0.4
1,121,919	+				+0.2
1,121,919	+				-1.0
1,121,920	-				+0.8
1,121,920	-				-0.8
1,121,924	-				+0.7
1,122,124	+		Echvi_0969	0.27	-0.8
1,122,124	+		Echvi_0969	0.27	-0.1
1,122,124	+		Echvi_0969	0.27	-0.7
1,122,125	-				+0.8
1,122,125	-		Echvi_0969	0.27	+0.0
1,122,125	-		Echvi_0969	0.27	-0.1
1,122,126	+		Echvi_0969	0.28	-0.6
1,122,126	+		Echvi_0969	0.28	-0.2
1,122,170	+		Echvi_0969	0.32	+0.1
1,122,192	+				+1.8
1,122,202	+		Echvi_0969	0.35	+0.5
1,122,203	-		Echvi_0969	0.35	-0.2
1,122,203	-		Echvi_0969	0.35	-0.6
1,122,203	-		Echvi_0969	0.35	+0.2
1,122,203	-		Echvi_0969	0.35	-0.9
1,122,205	+		Echvi_0969	0.35	+1.2
1,122,205	+		Echvi_0969	0.35	+0.2
1,122,205	+		Echvi_0969	0.35	+1.9
1,122,255	+		Echvi_0969	0.40	-1.4
1,122,256	-		Echvi_0969	0.40	-0.4
1,122,256	-		Echvi_0969	0.40	+0.8
1,122,333	+		Echvi_0969	0.47	-0.6
1,122,333	+		Echvi_0969	0.47	-2.0
1,122,334	-		Echvi_0969	0.47	-0.5
1,122,349	-		Echvi_0969	0.48	+0.2
1,122,422	-		Echvi_0969	0.55	-1.1
1,122,502	+		Echvi_0969	0.63	-1.3
1,122,506	+		Echvi_0969	0.63	+1.8
1,122,507	-		Echvi_0969	0.63	+0.0
1,122,507	-		Echvi_0969	0.63	-0.8
1,122,548	-		Echvi_0969	0.67	-0.0
1,122,580	-		Echvi_0969	0.70	+1.1
1,122,580	-		Echvi_0969	0.70	+0.3