Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0954

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,099,950	-		Echvi_0953	0.79	-0.6
1,099,950	-		Echvi_0953	0.79	+0.9
1,099,970	+		Echvi_0953	0.80	-3.0
1,099,970	+		Echvi_0953	0.80	-0.8
1,099,970	+		Echvi_0953	0.80	+0.8
1,099,970	+		Echvi_0953	0.80	-1.2
1,099,971	-		Echvi_0953	0.80	+1.2
1,099,971	-		Echvi_0953	0.80	+0.5
1,099,971	-		Echvi_0953	0.80	+1.2
1,099,971	-		Echvi_0953	0.80	-0.2
1,099,978	+		Echvi_0953	0.80	+0.2
1,099,978	+		Echvi_0953	0.80	+0.2
1,099,978	+		Echvi_0953	0.80	-1.4
1,099,978	+		Echvi_0953	0.80	+0.3
1,099,978	+		Echvi_0953	0.80	-0.3
1,099,978	+		Echvi_0953	0.80	-1.5
1,099,979	-		Echvi_0953	0.80	+0.6
1,099,979	-		Echvi_0953	0.80	+0.2
1,099,979	-		Echvi_0953	0.80	+0.5
1,099,979	-		Echvi_0953	0.80	+0.0
1,099,979	-		Echvi_0953	0.80	-0.4
1,099,982	+		Echvi_0953	0.80	-0.9
1,099,983	-		Echvi_0953	0.80	+0.9
1,100,009	+		Echvi_0953	0.81	-1.9
1,100,009	+		Echvi_0953	0.81	-0.1
1,100,032	+		Echvi_0953	0.82	-0.1
1,100,032	+		Echvi_0953	0.82	-1.8
1,100,033	-		Echvi_0953	0.82	-0.6
1,100,069	+		Echvi_0953	0.84	-0.1
1,100,070	-		Echvi_0953	0.84	-0.5
1,100,070	-		Echvi_0953	0.84	+0.3
1,100,091	-		Echvi_0953	0.85	+1.5
1,100,139	+		Echvi_0953	0.86	-0.2
1,100,139	+		Echvi_0953	0.86	-2.1
1,100,140	-		Echvi_0953	0.86	+0.4
1,100,157	+		Echvi_0953	0.87	-1.2
1,100,157	+		Echvi_0953	0.87	-1.2
1,100,158	-		Echvi_0953	0.87	+0.4
1,100,158	-		Echvi_0953	0.87	-2.0
1,100,159	+		Echvi_0953	0.87	-0.6
1,100,160	-		Echvi_0953	0.87	-0.9
1,100,175	+		Echvi_0953	0.88	-0.4
1,100,353	+				-2.0
1,100,377	+				-2.0
1,100,377	+				-1.6
1,100,377	+				-0.2
1,100,378	-				-0.9
1,100,392	+				+0.4
1,100,392	+				-3.3
1,100,393	-				-0.8
1,100,464	+				-3.4
1,100,464	+				-2.4
1,100,464	+				-1.7
1,100,465	-				+0.1
1,100,494	+				-0.6
1,100,514	+				-0.7
1,100,514	+				-0.6
1,100,515	-				-0.8
1,100,527	-				-1.2
1,100,558	+				-1.9
1,100,587	+				-0.7
1,100,587	+				-3.1
1,100,587	+				+0.8
1,100,587	+				-0.2
1,100,588	-				-0.8
1,100,600	-				+1.3
1,100,618	+				-1.1
1,100,619	-				+0.2
1,100,623	-				-0.6
1,100,667	+				-0.5
1,100,668	-				+0.7
1,100,668	-				-0.1
1,100,689	+				-0.6
1,100,721	+				-0.9
1,100,722	-				+1.4
1,100,739	-				+1.3
1,100,761	+				-1.2
1,100,810	+				-2.8
1,100,816	-				+0.9
1,100,866	+				-0.2
1,100,866	+				-1.0
1,100,866	+				-1.2
1,100,866	+				-2.5
1,100,867	-				-0.9
1,100,867	-				-1.3
1,100,867	-				-2.2
1,100,867	-				-1.4
1,100,867	-				-3.3
1,100,868	+				-1.4
1,100,868	+				+0.3
1,100,885	+				-0.8
1,100,886	-				-2.1
1,100,886	-				-0.8
1,100,913	+				-0.7
1,100,913	+				-0.2
1,100,914	-				-2.0
1,101,004	+				-1.1
1,101,048	+		Echvi_0954	0.11	-0.0
1,101,049	-		Echvi_0954	0.11	-1.2
1,101,056	+		Echvi_0954	0.11	-2.8
1,101,056	+		Echvi_0954	0.11	-1.0
1,101,056	+		Echvi_0954	0.11	-2.1
1,101,056	+		Echvi_0954	0.11	+0.4
1,101,057	-		Echvi_0954	0.12	-0.9
1,101,146	+		Echvi_0954	0.18	+0.1
1,101,147	-		Echvi_0954	0.18	-2.3
1,101,258	+		Echvi_0954	0.25	-1.6
1,101,258	+		Echvi_0954	0.25	-3.3
1,101,258	+		Echvi_0954	0.25	-3.1
1,101,260	+		Echvi_0954	0.25	-0.6
1,101,260	+		Echvi_0954	0.25	-2.1
1,101,260	+		Echvi_0954	0.25	-0.6
1,101,260	+		Echvi_0954	0.25	-2.2
1,101,261	-		Echvi_0954	0.25	-2.4
1,101,283	-		Echvi_0954	0.27	-2.0
1,101,283	-		Echvi_0954	0.27	-2.0
1,101,317	+		Echvi_0954	0.29	+0.8
1,101,317	+		Echvi_0954	0.29	-1.8
1,101,317	+		Echvi_0954	0.29	-0.4
1,101,318	-		Echvi_0954	0.29	-2.5
1,101,437	+		Echvi_0954	0.37	-2.8
1,101,437	+		Echvi_0954	0.37	-3.2
1,101,474	+		Echvi_0954	0.39	-2.4
1,101,486	+		Echvi_0954	0.40	-1.9
1,101,486	+		Echvi_0954	0.40	-1.8
1,101,494	-		Echvi_0954	0.41	-2.9
1,101,494	-		Echvi_0954	0.41	-3.4
1,101,501	+		Echvi_0954	0.41	-1.2
1,101,501	+		Echvi_0954	0.41	-1.2
1,101,501	+		Echvi_0954	0.41	-3.6
1,101,502	-		Echvi_0954	0.41	-2.6
1,101,502	-		Echvi_0954	0.41	-0.9
1,101,502	-		Echvi_0954	0.41	-4.2
1,101,503	+		Echvi_0954	0.41	-2.2
1,101,503	+		Echvi_0954	0.41	-1.6
1,101,503	+		Echvi_0954	0.41	-1.0
1,101,503	+		Echvi_0954	0.41	-1.9
1,101,503	+		Echvi_0954	0.41	-2.1
1,101,503	+		Echvi_0954	0.41	-2.0
1,101,503	+		Echvi_0954	0.41	-0.9
1,101,503	+		Echvi_0954	0.41	-1.5
1,101,504	-		Echvi_0954	0.41	-3.4
1,101,504	-		Echvi_0954	0.41	-2.3
1,101,504	-		Echvi_0954	0.41	+0.2
1,101,504	-		Echvi_0954	0.41	-0.4
1,101,504	-		Echvi_0954	0.41	-3.0
1,101,524	+		Echvi_0954	0.43	-2.0
1,101,576	+		Echvi_0954	0.46	+0.8
1,101,576	+		Echvi_0954	0.46	-2.3
1,101,577	-		Echvi_0954	0.46	+0.0
1,101,578	+		Echvi_0954	0.46	+0.2
1,101,578	+		Echvi_0954	0.46	-3.3
1,101,669	+		Echvi_0954	0.52	-1.5
1,101,669	+		Echvi_0954	0.52	-0.3
1,101,669	+		Echvi_0954	0.52	+0.1
1,101,669	+		Echvi_0954	0.52	+0.6
1,101,669	+		Echvi_0954	0.52	-1.3
1,101,670	-		Echvi_0954	0.53	-2.1
1,101,670	-		Echvi_0954	0.53	-0.5
1,101,794	+		Echvi_0954	0.61	-3.4
1,101,806	-		Echvi_0954	0.62	-4.0
1,101,806	-		Echvi_0954	0.62	-0.5
1,101,806	-		Echvi_0954	0.62	-1.6
1,101,813	+		Echvi_0954	0.62	-2.9
1,101,845	-		Echvi_0954	0.64	-0.5
1,101,871	-		Echvi_0954	0.66	-2.4
1,101,879	+		Echvi_0954	0.66	-0.2
1,101,881	+		Echvi_0954	0.67	-1.0
1,101,881	+		Echvi_0954	0.67	-1.9
1,101,881	+		Echvi_0954	0.67	-0.5
1,101,881	+		Echvi_0954	0.67	-1.0
1,101,881	+		Echvi_0954	0.67	-1.4
1,101,881	+		Echvi_0954	0.67	-0.9
1,101,881	+		Echvi_0954	0.67	+0.4
1,101,882	-		Echvi_0954	0.67	-1.6
1,101,882	-		Echvi_0954	0.67	-1.6
1,101,882	-		Echvi_0954	0.67	-2.0
1,101,882	-		Echvi_0954	0.67	-2.0
1,101,882	-		Echvi_0954	0.67	-0.2
1,101,882	-		Echvi_0954	0.67	-1.3
1,101,882	-		Echvi_0954	0.67	-0.8
1,101,902	-		Echvi_0954	0.68	-1.6
1,101,902	-		Echvi_0954	0.68	-0.6
1,101,915	+		Echvi_0954	0.69	-1.7
1,102,032	+		Echvi_0954	0.77	-1.5
1,102,032	+		Echvi_0954	0.77	-2.9
1,102,032	+		Echvi_0954	0.77	-3.9
1,102,032	+		Echvi_0954	0.77	-1.2
1,102,032	+		Echvi_0954	0.77	+0.8
1,102,032	+		Echvi_0954	0.77	-0.7
1,102,033	-		Echvi_0954	0.77	-3.4
1,102,033	-		Echvi_0954	0.77	-3.0
1,102,033	-		Echvi_0954	0.77	-2.2
1,102,033	-		Echvi_0954	0.77	-1.5
1,102,033	-		Echvi_0954	0.77	-1.9
1,102,101	+		Echvi_0954	0.81	-1.9
1,102,101	+		Echvi_0954	0.81	-2.0
1,102,101	+		Echvi_0954	0.81	-0.5
1,102,102	-		Echvi_0954	0.81	-1.8
1,102,102	-		Echvi_0954	0.81	-1.5
1,102,102	-		Echvi_0954	0.81	-0.5
1,102,102	-		Echvi_0954	0.81	-2.5
1,102,105	+		Echvi_0954	0.82	-3.8
1,102,105	+		Echvi_0954	0.82	-1.9
1,102,105	+		Echvi_0954	0.82	-0.9
1,102,105	+		Echvi_0954	0.82	-0.6
1,102,105	+		Echvi_0954	0.82	-2.5
1,102,106	-		Echvi_0954	0.82	-2.2
1,102,106	-		Echvi_0954	0.82	-2.4
1,102,218	+		Echvi_0954	0.89	-2.0
1,102,302	+				-2.3
1,102,302	+				-2.4
1,102,302	+				-1.7
1,102,303	-				-2.9
1,102,306	-				-3.0
1,102,314	-				-1.6
1,102,314	-				-2.7
1,102,337	-				-2.5
1,102,337	-				-2.6
1,102,395	-				-0.4
1,102,407	+				-2.2
1,102,408	-				-0.9
1,102,439	+				-1.9
1,102,439	+				-2.3
1,102,440	-				-3.4
1,102,440	-				-1.8
1,102,440	-				-2.0
1,102,440	-				-1.1
1,102,443	+				-0.4
1,102,525	-				-0.1
1,102,549	+				-1.2
1,102,549	+				+1.2
1,102,549	+				-0.7
1,102,550	-				-1.0
1,102,550	-				-2.6
1,102,558	+				-1.0
1,102,558	+				-2.9
1,102,559	-				-0.7
1,102,580	+				-1.4
1,102,580	+				-2.1
1,102,600	+				-0.6
1,102,600	+				-2.4
1,102,601	-				-0.8
1,102,601	-				-3.0
1,102,610	+				-1.5
1,102,610	+				-2.3
1,102,611	-				-0.2
1,102,611	-				+0.3
1,102,665	+				-1.4
1,102,665	+				-2.0
1,102,666	-				-0.9
1,102,763	-		Echvi_0955	0.12	-2.1
1,102,772	+		Echvi_0955	0.12	-2.4
1,102,784	+		Echvi_0955	0.12	+0.3
1,102,784	+		Echvi_0955	0.12	-1.5
1,102,785	-		Echvi_0955	0.12	+0.1
1,102,785	-		Echvi_0955	0.12	-1.6
1,102,785	-		Echvi_0955	0.12	-3.0
1,102,816	+		Echvi_0955	0.13	-2.3
1,102,816	+		Echvi_0955	0.13	-0.1
1,102,817	-		Echvi_0955	0.13	-2.2
1,102,822	+		Echvi_0955	0.14	-0.1
1,102,822	+		Echvi_0955	0.14	-2.7
1,102,848	+		Echvi_0955	0.14	-3.6
1,102,849	-		Echvi_0955	0.14	-0.9
1,102,849	-		Echvi_0955	0.14	-1.2
1,102,849	-		Echvi_0955	0.14	-1.0
1,102,914	-		Echvi_0955	0.16	-2.4
1,102,914	-		Echvi_0955	0.16	-1.2
1,102,914	-		Echvi_0955	0.16	-2.5
1,102,935	+		Echvi_0955	0.17	-1.6
1,102,935	+		Echvi_0955	0.17	-0.6
1,102,935	+		Echvi_0955	0.17	-1.4
1,102,935	+		Echvi_0955	0.17	-0.1
1,102,935	+		Echvi_0955	0.17	-0.8
1,102,935	+		Echvi_0955	0.17	-1.1
1,102,936	-		Echvi_0955	0.17	-1.5
1,102,939	+		Echvi_0955	0.17	-0.8
1,102,939	+		Echvi_0955	0.17	-1.6
1,102,940	-		Echvi_0955	0.17	-1.7
1,102,940	-		Echvi_0955	0.17	+0.5
1,102,940	-		Echvi_0955	0.17	-1.1
1,102,940	-		Echvi_0955	0.17	-2.4
1,102,940	-		Echvi_0955	0.17	-0.8
1,102,940	-		Echvi_0955	0.17	-1.5
1,102,982	+		Echvi_0955	0.19	-0.6
1,102,982	+		Echvi_0955	0.19	-1.5
1,102,982	+		Echvi_0955	0.19	-3.1
1,102,983	-		Echvi_0955	0.19	-2.5
1,102,983	-		Echvi_0955	0.19	-3.8
1,102,983	-		Echvi_0955	0.19	-2.1
1,102,996	-		Echvi_0955	0.19	-1.0
1,102,996	-		Echvi_0955	0.19	-1.6
1,102,996	-		Echvi_0955	0.19	-2.0
1,103,006	+		Echvi_0955	0.19	-0.2
1,103,049	-		Echvi_0955	0.21	+0.1
1,103,075	+		Echvi_0955	0.22	+0.3
1,103,075	+		Echvi_0955	0.22	-1.0
1,103,076	-		Echvi_0955	0.22	-1.6
1,103,124	+		Echvi_0955	0.23	-2.4
1,103,124	+		Echvi_0955	0.23	-1.0
1,103,125	-		Echvi_0955	0.23	-2.4
1,103,163	+		Echvi_0955	0.24	-1.7
1,103,232	+		Echvi_0955	0.27	+0.4
1,103,262	+		Echvi_0955	0.27	-1.0
1,103,275	+		Echvi_0955	0.28	-1.1
1,103,275	+		Echvi_0955	0.28	-1.5
1,103,275	+		Echvi_0955	0.28	-0.7
1,103,275	+		Echvi_0955	0.28	-2.1
1,103,275	+		Echvi_0955	0.28	-0.6
1,103,276	-		Echvi_0955	0.28	+0.2
1,103,276	-		Echvi_0955	0.28	-3.9
1,103,276	-		Echvi_0955	0.28	-1.9
1,103,276	-		Echvi_0955	0.28	-1.2
1,103,309	+		Echvi_0955	0.29	-1.6
1,103,309	+		Echvi_0955	0.29	-2.2
1,103,309	+		Echvi_0955	0.29	-1.8
1,103,310	-		Echvi_0955	0.29	-0.8
1,103,313	-		Echvi_0955	0.29	-0.9
1,103,371	-		Echvi_0955	0.31	+0.3