Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0947

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,089,832	+		Echvi_0945	0.64	-0.7
1,089,845	+		Echvi_0945	0.73	-1.7
1,089,851	+		Echvi_0945	0.78	+0.3
1,089,856	+		Echvi_0945	0.81	-0.2
1,089,859	-		Echvi_0945	0.83	+0.4
1,089,859	-		Echvi_0945	0.83	-1.1
1,089,896	+				-1.4
1,089,896	+				+0.7
1,089,897	-				+0.4
1,089,916	+				-2.3
1,089,916	+				+0.4
1,089,916	+				+1.8
1,089,917	-				+0.5
1,089,917	-				-0.9
1,089,917	-				-1.6
1,089,917	-				-0.2
1,089,921	+				-0.4
1,089,921	+				+0.2
1,089,921	+				+0.5
1,089,921	+				-0.7
1,089,922	-				+0.4
1,089,922	-				+0.5
1,089,925	+				+0.4
1,089,925	+				-0.7
1,089,926	-				-1.1
1,089,926	-				+0.2
1,089,959	+				-0.1
1,089,959	+				+2.0
1,089,960	-				-0.7
1,089,960	-				-0.1
1,089,963	+				+0.0
1,089,964	-				-0.8
1,089,964	-				-1.4
1,089,980	+				+0.0
1,089,980	+				-1.5
1,089,980	+				-1.0
1,089,998	-				-0.9
1,089,998	-				-0.3
1,090,000	-				-0.2
1,090,011	+				+0.4
1,090,011	+				-0.7
1,090,011	+				+0.3
1,090,011	+				+0.5
1,090,012	-				-0.1
1,090,012	-				+0.2
1,090,012	-				-0.2
1,090,012	-				-1.9
1,090,012	-				-0.3
1,090,012	-				+1.0
1,090,015	-				+0.9
1,090,037	+				-0.3
1,090,038	-				-0.8
1,090,040	+				-0.1
1,090,040	+				-1.7
1,090,040	+				+0.2
1,090,040	+				+0.6
1,090,040	+				-0.7
1,090,040	+				-0.0
1,090,041	-				+0.2
1,090,041	-				-0.3
1,090,041	-				-0.8
1,090,041	-				+0.6
1,090,074	+				-0.5
1,090,094	+				-0.7
1,090,116	-				-0.8
1,090,123	+				-0.2
1,090,124	-				+0.8
1,090,124	-				-1.4
1,090,124	-				-1.6
1,090,134	+				-0.2
1,090,134	+				+1.2
1,090,135	-				+1.1
1,090,135	-				+0.1
1,090,135	-				-1.1
1,090,138	+				+0.3
1,090,138	+				+0.3
1,090,142	+				-1.1
1,090,142	+				-1.3
1,090,152	+				+0.7
1,090,156	+				+0.2
1,090,156	+				-0.8
1,090,156	+				+0.8
1,090,156	+				+0.6
1,090,156	+				+0.2
1,090,157	-				+1.2
1,090,157	-				-1.0
1,090,221	+		Echvi_0946	0.18	-1.2
1,090,222	-		Echvi_0946	0.18	-3.1
1,090,330	+		Echvi_0946	0.47	+0.9
1,090,354	+		Echvi_0946	0.53	-0.3
1,090,354	+		Echvi_0946	0.53	-0.6
1,090,391	+		Echvi_0946	0.63	-1.4
1,090,392	-		Echvi_0946	0.64	-0.6
1,090,393	+		Echvi_0946	0.64	+0.4
1,090,393	+		Echvi_0946	0.64	+2.1
1,090,431	+		Echvi_0946	0.74	-0.6
1,090,450	-		Echvi_0946	0.79	+1.7
1,090,510	+				-1.0
1,090,511	-				-2.2
1,090,532	-				-0.4
1,090,580	+				+3.3
1,090,582	+				-0.8
1,090,583	-				-1.9
1,090,637	+				+1.0
1,090,637	+				-0.6
1,090,637	+				-0.1
1,090,687	-				-0.6
1,090,687	-				+0.4
1,090,741	+				-0.2
1,090,789	-				-0.4
1,090,806	+				+0.0
1,090,806	+				-1.0
1,090,815	+				-1.0
1,090,815	+				-1.1
1,090,824	-				+0.2
1,090,824	-				+0.7
1,090,893	+				-1.9
1,090,893	+				-1.3
1,090,893	+				-2.9
1,090,893	+				-0.7
1,090,894	-				-1.0
1,090,936	+		Echvi_0947	0.10	-1.2
1,090,936	+		Echvi_0947	0.10	-1.3
1,090,936	+		Echvi_0947	0.10	-0.8
1,090,936	+		Echvi_0947	0.10	-1.0
1,090,940	-		Echvi_0947	0.11	-1.7
1,090,940	-		Echvi_0947	0.11	+0.1
1,090,940	-		Echvi_0947	0.11	+0.1
1,090,984	-		Echvi_0947	0.14	+0.4
1,090,988	+		Echvi_0947	0.15	-1.3
1,091,037	+		Echvi_0947	0.19	-0.9
1,091,038	-		Echvi_0947	0.19	-1.4
1,091,038	-		Echvi_0947	0.19	-0.2
1,091,069	-		Echvi_0947	0.22	-1.2
1,091,094	+		Echvi_0947	0.24	-0.0
1,091,094	+		Echvi_0947	0.24	-1.8
1,091,094	+		Echvi_0947	0.24	+0.6
1,091,111	+		Echvi_0947	0.26	+0.3
1,091,111	+		Echvi_0947	0.26	-1.3
1,091,129	+		Echvi_0947	0.27	-1.1
1,091,129	+		Echvi_0947	0.27	-1.7
1,091,129	+		Echvi_0947	0.27	-0.9
1,091,129	+		Echvi_0947	0.27	-1.0
1,091,130	-		Echvi_0947	0.27	-1.6
1,091,130	-		Echvi_0947	0.27	-0.6
1,091,132	+		Echvi_0947	0.28	-0.8
1,091,132	+		Echvi_0947	0.28	-1.1
1,091,133	-		Echvi_0947	0.28	-1.7
1,091,133	-		Echvi_0947	0.28	-1.8
1,091,144	-		Echvi_0947	0.29	-0.8
1,091,191	+		Echvi_0947	0.33	+0.5
1,091,222	+		Echvi_0947	0.36	-2.1
1,091,222	+		Echvi_0947	0.36	+0.3
1,091,271	+		Echvi_0947	0.40	-1.2
1,091,398	-		Echvi_0947	0.51	-2.6
1,091,432	+		Echvi_0947	0.54	-0.6
1,091,469	-		Echvi_0947	0.58	-2.7
1,091,524	-		Echvi_0947	0.63	-1.6
1,091,543	-		Echvi_0947	0.64	-2.2
1,091,543	-		Echvi_0947	0.64	-3.0
1,091,543	-		Echvi_0947	0.64	-1.8
1,091,555	+		Echvi_0947	0.65	-0.6
1,091,556	-		Echvi_0947	0.65	-0.6
1,091,574	+		Echvi_0947	0.67	-1.9
1,091,575	-		Echvi_0947	0.67	-3.5
1,091,576	+		Echvi_0947	0.67	-1.0
1,091,576	+		Echvi_0947	0.67	-0.5
1,091,576	+		Echvi_0947	0.67	-1.2
1,091,577	-		Echvi_0947	0.67	-0.8
1,091,577	-		Echvi_0947	0.67	-0.4
1,091,577	-		Echvi_0947	0.67	+0.8
1,091,577	-		Echvi_0947	0.67	-1.2
1,091,577	-		Echvi_0947	0.67	-1.8
1,091,615	-		Echvi_0947	0.71	-0.3
1,091,655	+		Echvi_0947	0.74	-0.8
1,091,656	-		Echvi_0947	0.74	-3.3
1,091,700	+		Echvi_0947	0.78	-2.2
1,091,730	-		Echvi_0947	0.81	-1.3
1,091,735	-		Echvi_0947	0.81	-1.7
1,091,776	-		Echvi_0947	0.85	-0.8
1,091,793	+		Echvi_0947	0.87	-0.9
1,091,794	-		Echvi_0947	0.87	-0.7
1,091,817	+		Echvi_0947	0.89	-1.0
1,091,818	-		Echvi_0947	0.89	-3.0
1,091,818	-		Echvi_0947	0.89	-1.6
1,091,820	+		Echvi_0947	0.89	-0.3
1,091,820	+		Echvi_0947	0.89	-0.1
1,091,820	+		Echvi_0947	0.89	-1.6
1,091,820	+		Echvi_0947	0.89	-1.0
1,091,821	-		Echvi_0947	0.89	-1.1
1,091,821	-		Echvi_0947	0.89	-1.0
1,091,821	-		Echvi_0947	0.89	-0.5
1,091,822	+		Echvi_0947	0.89	-0.4
1,091,822	+		Echvi_0947	0.89	-1.0
1,091,847	+				-1.3
1,091,877	+				+0.0
1,091,877	+				-0.1
1,091,878	-				-1.2
1,091,879	+				-1.1
1,091,879	+				+0.3
1,091,880	-				-0.1
1,091,880	-				-2.6
1,091,903	-				-2.2
1,091,915	+				-1.8
1,091,915	+				-1.1
1,091,915	+				-2.2
1,091,915	+				-1.0
1,091,916	-				-0.1
1,091,916	-				-0.8
1,091,916	-				-3.6
1,091,916	-				-2.7
1,091,916	-				-0.6
1,091,916	-				-0.1
1,091,916	-				-1.5
1,091,919	+				-0.4
1,091,919	+				-1.4
1,091,957	+				-3.1
1,091,957	+				+1.5
1,091,957	+				-1.8
1,091,957	+				-0.7
1,091,957	+				-0.6
1,091,958	-				-0.7
1,091,974	+				-0.8
1,091,975	-				-0.9
1,091,975	-				+0.7
1,091,982	+				-1.1
1,091,987	+				-1.6
1,092,003	-				-0.6
1,092,010	-				-1.4
1,092,046	+				-0.2
1,092,047	-				+2.1
1,092,047	-				+1.2
1,092,056	+				-3.2
1,092,056	+				-2.5
1,092,056	+				-1.0
1,092,057	-				+0.3
1,092,057	-				-0.2
1,092,057	-				+1.9
1,092,079	+				+0.9
1,092,079	+				+0.8
1,092,080	-				+0.8
1,092,080	-				+0.5
1,092,166	+		Echvi_0948	0.15	-0.0
1,092,166	+		Echvi_0948	0.15	+1.7
1,092,166	+		Echvi_0948	0.15	-0.9
1,092,166	+		Echvi_0948	0.15	-0.6
1,092,166	+		Echvi_0948	0.15	-0.1
1,092,167	-		Echvi_0948	0.16	-0.6
1,092,167	-		Echvi_0948	0.16	+0.1
1,092,167	-		Echvi_0948	0.16	-0.2
1,092,167	-		Echvi_0948	0.16	+0.6
1,092,167	-		Echvi_0948	0.16	+1.2
1,092,167	-		Echvi_0948	0.16	-0.6
1,092,167	-		Echvi_0948	0.16	-0.1
1,092,203	+		Echvi_0948	0.18	-0.4
1,092,203	+		Echvi_0948	0.18	-0.3
1,092,203	+		Echvi_0948	0.18	-1.2
1,092,203	+		Echvi_0948	0.18	-3.1
1,092,204	-		Echvi_0948	0.18	+1.0
1,092,204	-		Echvi_0948	0.18	+0.3
1,092,204	-		Echvi_0948	0.18	+0.4
1,092,204	-		Echvi_0948	0.18	+0.4
1,092,204	-		Echvi_0948	0.18	+2.0
1,092,204	-		Echvi_0948	0.18	+0.2
1,092,204	-		Echvi_0948	0.18	+0.1
1,092,204	-		Echvi_0948	0.18	+0.2
1,092,221	-		Echvi_0948	0.20	-0.7
1,092,271	+		Echvi_0948	0.23	-3.6
1,092,323	-		Echvi_0948	0.27	+0.2
1,092,355	+		Echvi_0948	0.29	-1.8
1,092,381	+		Echvi_0948	0.31	+0.1
1,092,381	+		Echvi_0948	0.31	-0.8
1,092,412	+		Echvi_0948	0.34	+0.2
1,092,420	-		Echvi_0948	0.34	+0.8
1,092,444	-		Echvi_0948	0.36	-0.4
1,092,452	+		Echvi_0948	0.37	-1.6
1,092,452	+		Echvi_0948	0.37	-1.2
1,092,452	+		Echvi_0948	0.37	-0.5
1,092,452	+		Echvi_0948	0.37	+0.1
1,092,452	+		Echvi_0948	0.37	-1.9
1,092,452	+		Echvi_0948	0.37	+0.1
1,092,452	+		Echvi_0948	0.37	-2.1
1,092,452	+		Echvi_0948	0.37	-0.8
1,092,452	+		Echvi_0948	0.37	-0.9
1,092,453	-		Echvi_0948	0.37	+0.0
1,092,453	-		Echvi_0948	0.37	+0.3
1,092,453	-		Echvi_0948	0.37	-0.7
1,092,453	-		Echvi_0948	0.37	-1.6
1,092,453	-		Echvi_0948	0.37	-0.2
1,092,454	+		Echvi_0948	0.37	+0.5
1,092,454	+		Echvi_0948	0.37	+0.2
1,092,454	+				-0.2
1,092,454	+		Echvi_0948	0.37	-0.2
1,092,454	+		Echvi_0948	0.37	-0.5
1,092,454	+		Echvi_0948	0.37	+2.2
1,092,454	+		Echvi_0948	0.37	+0.4
1,092,454	+		Echvi_0948	0.37	+0.4
1,092,454	+		Echvi_0948	0.37	-0.3
1,092,454	+		Echvi_0948	0.37	-0.7
1,092,455	-		Echvi_0948	0.37	+0.5
1,092,455	-		Echvi_0948	0.37	+1.0
1,092,455	-		Echvi_0948	0.37	-0.4
1,092,455	-		Echvi_0948	0.37	+0.6
1,092,455	-		Echvi_0948	0.37	-2.1
1,092,455	-		Echvi_0948	0.37	+1.1
1,092,455	-		Echvi_0948	0.37	+0.3
1,092,455	-		Echvi_0948	0.37	-0.6
1,092,455	-		Echvi_0948	0.37	+2.2
1,092,455	-		Echvi_0948	0.37	+1.2
1,092,456	+		Echvi_0948	0.37	-1.4
1,092,456	+		Echvi_0948	0.37	-0.6
1,092,456	+		Echvi_0948	0.37	-0.7
1,092,456	+		Echvi_0948	0.37	-0.4
1,092,457	-		Echvi_0948	0.37	+0.9
1,092,457	-		Echvi_0948	0.37	+0.9
1,092,457	-		Echvi_0948	0.37	+1.1
1,092,457	-		Echvi_0948	0.37	-0.2
1,092,457	-		Echvi_0948	0.37	-0.7
1,092,522	+		Echvi_0948	0.42	-0.0
1,092,600	+		Echvi_0948	0.47	-1.5
1,092,600	+		Echvi_0948	0.47	-0.5
1,092,600	+		Echvi_0948	0.47	-1.3
1,092,601	-		Echvi_0948	0.48	-1.4
1,092,601	-		Echvi_0948	0.48	-2.6
1,092,601	-		Echvi_0948	0.48	+0.0
1,092,633	+		Echvi_0948	0.50	-0.0
1,092,758	-		Echvi_0948	0.59	+0.8
1,092,758	-		Echvi_0948	0.59	-1.1
1,092,758	-		Echvi_0948	0.59	-0.5
1,092,764	+		Echvi_0948	0.60	-0.3
1,092,764	+		Echvi_0948	0.60	-1.0
1,092,781	+		Echvi_0948	0.61	-1.6
1,092,781	+		Echvi_0948	0.61	-0.6
1,092,782	-		Echvi_0948	0.61	-0.2
1,092,782	-		Echvi_0948	0.61	+1.5
1,092,782	-		Echvi_0948	0.61	-0.5
1,092,782	-		Echvi_0948	0.61	-0.4
1,092,782	-		Echvi_0948	0.61	+1.0
1,092,789	+		Echvi_0948	0.61	-0.8
1,092,801	+		Echvi_0948	0.62	-2.0
1,092,801	+		Echvi_0948	0.62	-0.6
1,092,801	+		Echvi_0948	0.62	-2.7
1,092,801	+		Echvi_0948	0.62	+0.1
1,092,801	+		Echvi_0948	0.62	+1.8
1,092,801	+		Echvi_0948	0.62	+0.2
1,092,801	+		Echvi_0948	0.62	-0.9
1,092,802	-		Echvi_0948	0.62	-0.7
1,092,802	-		Echvi_0948	0.62	+0.5
1,092,802	-		Echvi_0948	0.62	+0.1
1,092,802	-		Echvi_0948	0.62	-1.2
1,092,802	-		Echvi_0948	0.62	+0.9
1,092,802	-		Echvi_0948	0.62	+0.1
1,092,803	+		Echvi_0948	0.62	+1.3
1,092,803	+		Echvi_0948	0.62	+3.6
1,092,803	+				+3.8
1,092,803	+		Echvi_0948	0.62	-0.5
1,092,803	+		Echvi_0948	0.62	+0.4
1,092,804	-		Echvi_0948	0.63	-1.2
1,092,804	-		Echvi_0948	0.63	+0.8
1,092,804	-		Echvi_0948	0.63	-1.4
1,092,804	-		Echvi_0948	0.63	-2.1
1,092,822	+		Echvi_0948	0.64	-0.3
1,092,823	-		Echvi_0948	0.64	-2.4
1,092,891	+				-0.2
1,092,900	+		Echvi_0948	0.70	-1.0
1,092,900	+		Echvi_0948	0.70	-0.7
1,092,900	+		Echvi_0948	0.70	-1.4
1,092,900	+		Echvi_0948	0.70	-0.8
1,092,901	-		Echvi_0948	0.70	-0.1
1,092,901	-		Echvi_0948	0.70	+0.7
1,092,901	-		Echvi_0948	0.70	+1.6
1,092,901	-		Echvi_0948	0.70	-0.2
1,092,933	+		Echvi_0948	0.72	-0.3
1,092,934	-		Echvi_0948	0.72	-0.1