Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0339

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
360,179	-				+1.0
360,180	+				+0.9
361,249	-		Echvi_0339	0.11	-2.1
361,518	-		Echvi_0339	0.50	-0.8
361,522	-		Echvi_0339	0.50	-0.9
361,522	-		Echvi_0339	0.50	-2.7
361,558	-		Echvi_0339	0.56	-1.3
361,560	-		Echvi_0339	0.56	-2.3
361,560	-		Echvi_0339	0.56	-2.0
361,560	-		Echvi_0339	0.56	-1.2
361,599	-		Echvi_0339	0.61	-1.4
361,599	-		Echvi_0339	0.61	-0.0
361,629	-		Echvi_0339	0.66	-1.0
361,636	-		Echvi_0339	0.67	-2.2
361,660	-		Echvi_0339	0.70	-2.6
361,732	-		Echvi_0339	0.81	-1.6
361,767	-		Echvi_0339	0.86	-0.1
361,771	-		Echvi_0339	0.86	-1.9
361,783	-		Echvi_0339	0.88	-1.3
361,944	+				-1.4
361,944	+				+1.1
361,944	+				-0.2
361,944	+				+1.1
361,945	-				+1.5
361,945	-				-0.7
362,051	-				+0.3
362,052	-				-0.3
362,144	+		Echvi_0340	0.15	+0.7
362,150	-		Echvi_0340	0.16	-1.5
362,221	+		Echvi_0340	0.29	+1.1
362,221	+		Echvi_0340	0.29	-0.4
362,222	-		Echvi_0340	0.30	-1.7
362,222	-		Echvi_0340	0.30	-2.1
362,307	+		Echvi_0340	0.45	+0.3
362,396	-		Echvi_0340	0.61	-0.1
362,605	-				-1.1
362,611	-				+0.4
362,620	-				+0.9
362,634	-				-0.0
362,642	+				+0.1
362,642	+				+0.8
362,643	-				-1.4
362,643	-				-0.2
362,644	+				+0.5
362,645	-				+0.1
362,673	+				-0.6
362,673	+				+0.4
362,674	-				+1.8
362,674	-				+2.1
362,674	-				+1.2
362,804	+		Echvi_0341	0.32	+1.0