Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0124

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
123,315	+				-0.4
123,429	+				-1.4
123,472	+				-1.8
123,499	-				-1.3
123,499	-				-1.8
123,499	-				+0.7
123,654	+		Echvi_0123	0.25	-0.3
123,654	+		Echvi_0123	0.25	+2.2
123,655	-		Echvi_0123	0.25	-1.3
123,688	+		Echvi_0123	0.29	+0.4
123,688	+		Echvi_0123	0.29	-0.5
123,689	-		Echvi_0123	0.29	-0.3
123,689	-		Echvi_0123	0.29	+0.0
123,689	-		Echvi_0123	0.29	+2.2
123,689	-		Echvi_0123	0.29	-1.0
123,722	-		Echvi_0123	0.33	-0.7
123,954	-		Echvi_0123	0.61	+0.7
123,995	+		Echvi_0123	0.66	-1.7
124,025	-		Echvi_0123	0.69	-0.6
124,164	+		Echvi_0123	0.86	+2.2
124,199	-		Echvi_0123	0.90	+2.5
124,329	-				-1.8
124,347	+				+0.4
124,347	+				+0.2
124,491	-		Echvi_0124	0.17	+1.4
124,614	+		Echvi_0124	0.28	-0.3
124,625	+		Echvi_0124	0.29	-0.3
124,647	+		Echvi_0124	0.31	-0.2
124,672	+		Echvi_0124	0.33	-0.2
124,673	-		Echvi_0124	0.33	+0.3
124,673	-		Echvi_0124	0.33	+1.0
124,676	+		Echvi_0124	0.33	-1.4
124,677	-		Echvi_0124	0.33	-0.6
124,677	-		Echvi_0124	0.33	+0.5
124,808	+		Echvi_0124	0.45	-2.6
124,808	+		Echvi_0124	0.45	+1.2
124,809	-		Echvi_0124	0.45	+0.5
124,809	-		Echvi_0124	0.45	+0.6
124,911	-		Echvi_0124	0.54	+0.6
124,948	-		Echvi_0124	0.57	-0.4
124,977	+		Echvi_0124	0.59	-0.8
125,005	+		Echvi_0124	0.62	-0.5
125,055	+		Echvi_0124	0.66	-0.1
125,067	+		Echvi_0124	0.67	+0.2
125,369	+				-0.5
125,369	+				+1.3
125,369	+				-0.2
125,447	+				+0.5
125,448	-				-0.3
125,471	+				-1.3
125,471	+				-0.0
125,472	-				-0.7
125,472	-				-0.2
125,551	+				+1.3
125,551	+				+0.2
125,552	-				+0.2
125,572	+		Echvi_0125	0.12	+0.7
125,678	+		Echvi_0125	0.24	-0.1
125,714	+		Echvi_0125	0.29	+0.3
125,714	+		Echvi_0125	0.29	+0.5
125,715	-		Echvi_0125	0.29	-2.0
125,715	-		Echvi_0125	0.29	+0.7
125,762	+		Echvi_0125	0.34	+1.0
125,762	+		Echvi_0125	0.34	+0.2
125,763	-		Echvi_0125	0.34	-0.7
125,763	-		Echvi_0125	0.34	+1.5
125,835	+		Echvi_0125	0.43	+0.6
125,835	+		Echvi_0125	0.43	+1.5
125,835	+		Echvi_0125	0.43	+0.2
125,836	-		Echvi_0125	0.43	+0.5
126,039	-		Echvi_0125	0.67	+1.9
126,158	+		Echvi_0125	0.81	+0.9
126,159	-		Echvi_0125	0.81	-0.4
126,182	+		Echvi_0125	0.84	-0.1
126,204	+		Echvi_0125	0.86	+0.4
126,312	-				-0.1
126,326	-				-0.2
126,342	-				+0.4
126,377	-				+1.2