Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0119

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
118,196	-				-1.0
118,196	-				+0.3
118,196	-				-1.5
118,196	-				-0.8
118,201	-				+1.1
118,207	-				+0.7
118,271	-				-1.0
118,321	-				-1.3
118,321	-				-2.8
118,370	-		Echvi_0119	0.14	-0.7
118,370	-		Echvi_0119	0.14	-2.0
118,400	-		Echvi_0119	0.16	+0.3
118,400	-		Echvi_0119	0.16	-1.6
118,403	-		Echvi_0119	0.17	-1.3
118,417	-		Echvi_0119	0.18	+0.2
118,417	-		Echvi_0119	0.18	-0.8
118,432	-		Echvi_0119	0.19	-2.0
118,490	-		Echvi_0119	0.24	-1.3
118,568	-		Echvi_0119	0.30	-2.3
118,570	-		Echvi_0119	0.30	-1.4
118,570	-		Echvi_0119	0.30	-3.0
118,570	-		Echvi_0119	0.30	-1.8
118,570	-		Echvi_0119	0.30	+0.4
118,570	-		Echvi_0119	0.30	-1.4
118,583	-		Echvi_0119	0.32	-0.4
118,583	-		Echvi_0119	0.32	+0.3
118,654	-		Echvi_0119	0.38	-1.0
118,654	-		Echvi_0119	0.38	-0.6
118,654	-		Echvi_0119	0.38	-1.5
118,736	-		Echvi_0119	0.44	-2.2
118,760	-		Echvi_0119	0.46	-2.0
118,789	-		Echvi_0119	0.49	-3.9
118,789	-		Echvi_0119	0.49	-3.9
118,789	-		Echvi_0119	0.49	-1.3
118,789	-		Echvi_0119	0.49	-1.8
118,984	-		Echvi_0119	0.65	-1.0
119,006	-		Echvi_0119	0.67	-2.9
119,006	-		Echvi_0119	0.67	-2.5
119,058	-		Echvi_0119	0.71	-1.5
119,083	-		Echvi_0119	0.73	-1.8
119,208	-		Echvi_0119	0.84	+0.3
119,238	-		Echvi_0119	0.86	-1.6
119,249	-		Echvi_0119	0.87	-0.6
119,320	-				-0.3
119,500	+				-0.4
119,500	+				+0.2
119,500	+				-0.9
119,500	+				-0.5
119,500	+				-1.3
119,519	+				-1.4
119,528	+				-1.1
119,528	+				+0.0
119,528	+				-0.3
119,529	-				+2.5
119,529	-				+2.0
119,530	+				-1.2
119,530	+				-0.3
119,530	+				+1.0
119,531	-				+2.2
119,569	+				-1.1
119,570	-				+1.9
119,613	+				+2.7
119,613	+				+0.1
119,696	+				-0.4
119,738	-				+1.3
119,757	-				+2.0
119,858	-				+0.7
120,020	-				-0.5
120,020	-				-1.5
120,043	-				+2.1
120,202	+		Echvi_0120	0.23	+1.3
120,214	-		Echvi_0120	0.24	+1.1
120,238	-		Echvi_0120	0.26	-0.1
120,244	-		Echvi_0120	0.27	+0.1
120,255	+		Echvi_0120	0.28	+0.5
120,255	+		Echvi_0120	0.28	+1.3
120,288	+		Echvi_0120	0.31	+1.9
120,346	+		Echvi_0120	0.36	+1.6