Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_737 and PfGW456L13_738 overlap by 39 nucleotides PfGW456L13_738 and PfGW456L13_739 are separated by 89 nucleotides PfGW456L13_739 and PfGW456L13_740 are separated by 174 nucleotides
PfGW456L13_737 - Deacetylases, including yeast histone deacetylase and acetoin utilization protein, at 840,601 to 841,632
_737
PfGW456L13_738 - hypothetical protein, at 841,594 to 841,812
_738
PfGW456L13_739 - Transcriptional regulator, AraC family, at 841,902 to 842,894
_739
PfGW456L13_740 - L-asparaginase (EC 3.5.1.1) <small>(from data)</small>, at 843,069 to 844,073
_740
Position (kb) 841
842
843 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 840.941 kb on + strand, within PfGW456L13_737 at 841.013 kb on + strand, within PfGW456L13_737 at 841.014 kb on - strand, within PfGW456L13_737 at 841.046 kb on + strand, within PfGW456L13_737 at 841.047 kb on - strand, within PfGW456L13_737 at 841.124 kb on + strand, within PfGW456L13_737 at 841.125 kb on - strand, within PfGW456L13_737 at 841.247 kb on + strand, within PfGW456L13_737 at 841.298 kb on + strand, within PfGW456L13_737 at 841.298 kb on + strand, within PfGW456L13_737 at 841.298 kb on + strand, within PfGW456L13_737 at 841.298 kb on + strand, within PfGW456L13_737 at 841.298 kb on + strand, within PfGW456L13_737 at 841.298 kb on + strand, within PfGW456L13_737 at 841.298 kb on + strand, within PfGW456L13_737 at 841.299 kb on - strand, within PfGW456L13_737 at 841.434 kb on - strand, within PfGW456L13_737 at 841.619 kb on + strand at 841.619 kb on + strand at 841.619 kb on + strand at 841.620 kb on - strand at 841.620 kb on - strand at 841.837 kb on + strand at 841.837 kb on + strand at 841.837 kb on + strand at 841.837 kb on + strand at 841.838 kb on - strand at 841.894 kb on + strand at 841.894 kb on + strand at 841.895 kb on - strand at 841.895 kb on - strand at 841.895 kb on - strand at 841.895 kb on - strand at 841.999 kb on + strand at 841.999 kb on + strand at 841.999 kb on + strand at 841.999 kb on + strand at 841.999 kb on + strand at 841.999 kb on + strand at 842.000 kb on - strand at 842.000 kb on - strand at 842.000 kb on - strand at 842.000 kb on - strand at 842.071 kb on + strand, within PfGW456L13_739 at 842.072 kb on - strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.369 kb on - strand, within PfGW456L13_739 at 842.369 kb on - strand, within PfGW456L13_739 at 842.369 kb on - strand, within PfGW456L13_739 at 842.851 kb on - strand at 842.894 kb on + strand at 842.916 kb on - strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.936 kb on + strand at 842.936 kb on + strand at 842.936 kb on + strand at 842.937 kb on - strand at 842.937 kb on - strand at 842.957 kb on + strand at 842.957 kb on + strand at 842.958 kb on - strand at 842.958 kb on - strand at 843.051 kb on + strand at 843.051 kb on + strand at 843.052 kb on - strand at 843.052 kb on - strand at 843.052 kb on - strand at 843.229 kb on + strand, within PfGW456L13_740 at 843.229 kb on + strand, within PfGW456L13_740 at 843.229 kb on + strand, within PfGW456L13_740 at 843.229 kb on + strand, within PfGW456L13_740 at 843.229 kb on + strand, within PfGW456L13_740 at 843.230 kb on - strand, within PfGW456L13_740 at 843.230 kb on - strand, within PfGW456L13_740 at 843.355 kb on + strand, within PfGW456L13_740 at 843.472 kb on + strand, within PfGW456L13_740 at 843.472 kb on + strand, within PfGW456L13_740 at 843.472 kb on + strand, within PfGW456L13_740 at 843.473 kb on - strand, within PfGW456L13_740 at 843.473 kb on - strand, within PfGW456L13_740 at 843.473 kb on - strand, within PfGW456L13_740 at 843.473 kb on - strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.682 kb on - strand, within PfGW456L13_740 at 843.763 kb on + strand, within PfGW456L13_740 at 843.763 kb on + strand, within PfGW456L13_740 at 843.856 kb on + strand, within PfGW456L13_740 at 843.856 kb on + strand, within PfGW456L13_740 at 843.856 kb on + strand, within PfGW456L13_740 at 843.857 kb on - strand, within PfGW456L13_740
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 840,941 + PfGW456L13_737 0.33 +0.8 841,013 + PfGW456L13_737 0.40 -0.1 841,014 - PfGW456L13_737 0.40 +0.3 841,046 + PfGW456L13_737 0.43 -0.7 841,047 - PfGW456L13_737 0.43 +0.9 841,124 + PfGW456L13_737 0.51 -0.3 841,125 - PfGW456L13_737 0.51 +0.3 841,247 + PfGW456L13_737 0.63 +1.4 841,298 + PfGW456L13_737 0.68 -0.8 841,298 + PfGW456L13_737 0.68 -0.8 841,298 + PfGW456L13_737 0.68 -0.3 841,298 + PfGW456L13_737 0.68 +0.5 841,298 + PfGW456L13_737 0.68 -0.1 841,298 + PfGW456L13_737 0.68 -0.3 841,298 + PfGW456L13_737 0.68 -0.9 841,299 - PfGW456L13_737 0.68 +0.4 841,434 - PfGW456L13_737 0.81 +1.7 841,619 + +0.2 841,619 + -2.2 841,619 + -1.2 841,620 - +0.0 841,620 - +1.1 841,837 + +0.2 841,837 + -0.1 841,837 + -1.3 841,837 + -0.5 841,838 - +0.2 841,894 + -0.4 841,894 + -0.4 841,895 - +0.2 841,895 - -1.0 841,895 - -0.5 841,895 - +0.1 841,999 + -0.9 841,999 + -0.1 841,999 + +0.7 841,999 + -1.7 841,999 + -1.3 841,999 + +0.3 842,000 - +0.9 842,000 - +1.3 842,000 - +0.5 842,000 - +0.7 842,071 + PfGW456L13_739 0.17 -0.3 842,072 - PfGW456L13_739 0.17 -0.1 842,368 + PfGW456L13_739 0.47 -1.6 842,368 + PfGW456L13_739 0.47 -0.5 842,368 + PfGW456L13_739 0.47 +0.6 842,368 + PfGW456L13_739 0.47 -0.1 842,368 + PfGW456L13_739 0.47 -0.3 842,368 + PfGW456L13_739 0.47 +0.9 842,369 - PfGW456L13_739 0.47 +0.2 842,369 - PfGW456L13_739 0.47 -0.9 842,369 - PfGW456L13_739 0.47 +0.1 842,851 - -0.0 842,894 + +0.6 842,916 - +1.0 842,934 + +0.3 842,934 + +0.3 842,934 + +0.6 842,934 + +0.4 842,934 + -0.8 842,934 + +0.2 842,934 + +0.2 842,934 + -1.5 842,934 + +0.6 842,934 + +0.3 842,935 - +0.5 842,935 - -0.1 842,935 - +0.5 842,935 - +0.2 842,935 - -0.1 842,935 - +0.7 842,935 - -0.5 842,935 - -0.4 842,935 - +0.0 842,935 - -0.2 842,935 - -0.2 842,936 + -1.1 842,936 + -0.3 842,936 + +0.1 842,937 - +0.4 842,937 - +0.7 842,957 + +0.2 842,957 + -0.7 842,958 - +0.7 842,958 - -0.8 843,051 + -1.1 843,051 + -0.6 843,052 - +0.4 843,052 - -0.7 843,052 - -0.2 843,229 + PfGW456L13_740 0.16 -3.7 843,229 + PfGW456L13_740 0.16 -2.3 843,229 + PfGW456L13_740 0.16 -1.7 843,229 + PfGW456L13_740 0.16 -3.5 843,229 + PfGW456L13_740 0.16 -2.7 843,230 - PfGW456L13_740 0.16 -4.3 843,230 - PfGW456L13_740 0.16 +2.7 843,355 + PfGW456L13_740 0.28 -3.0 843,472 + PfGW456L13_740 0.40 -2.2 843,472 + PfGW456L13_740 0.40 -0.9 843,472 + PfGW456L13_740 0.40 -4.2 843,473 - PfGW456L13_740 0.40 -1.8 843,473 - PfGW456L13_740 0.40 -2.5 843,473 - PfGW456L13_740 0.40 -2.6 843,473 - PfGW456L13_740 0.40 -1.3 843,601 + PfGW456L13_740 0.53 -4.2 843,601 + PfGW456L13_740 0.53 -2.3 843,601 + PfGW456L13_740 0.53 -3.2 843,601 + PfGW456L13_740 0.53 -3.9 843,601 + PfGW456L13_740 0.53 +0.7 843,602 - PfGW456L13_740 0.53 -3.3 843,602 - PfGW456L13_740 0.53 -1.3 843,602 - PfGW456L13_740 0.53 -1.4 843,602 - PfGW456L13_740 0.53 -1.0 843,602 - PfGW456L13_740 0.53 -2.3 843,602 - PfGW456L13_740 0.53 -2.7 843,602 - PfGW456L13_740 0.53 -2.8 843,682 - PfGW456L13_740 0.61 -4.1 843,763 + PfGW456L13_740 0.69 -3.9 843,763 + PfGW456L13_740 0.69 -2.0 843,856 + PfGW456L13_740 0.78 -3.3 843,856 + PfGW456L13_740 0.78 -1.5 843,856 + PfGW456L13_740 0.78 -1.9 843,857 - PfGW456L13_740 0.78 -2.7
Or see this region's nucleotide sequence