Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1939

Experiment: L-Asparagine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Asparagine (C)
2,128,252	+		PfGW456L13_1937	0.64	-0.4
2,128,252	+		PfGW456L13_1937	0.64	-0.2
2,128,252	+				+0.2
2,128,252	+		PfGW456L13_1937	0.64	-1.1
2,128,252	+		PfGW456L13_1937	0.64	-0.8
2,128,252	+		PfGW456L13_1937	0.64	+0.4
2,128,253	-		PfGW456L13_1937	0.64	+0.1
2,128,253	-		PfGW456L13_1937	0.64	+0.2
2,128,253	-		PfGW456L13_1937	0.64	-0.4
2,128,253	-		PfGW456L13_1937	0.64	-0.8
2,128,257	-		PfGW456L13_1937	0.65	+0.4
2,128,580	+				+0.5
2,128,667	+				-0.7
2,128,667	+				-0.8
2,128,676	+				+0.4
2,128,721	+		PfGW456L13_1938	0.17	-0.0
2,128,826	+		PfGW456L13_1938	0.41	+0.3
2,128,826	+		PfGW456L13_1938	0.41	-0.8
2,128,827	-		PfGW456L13_1938	0.41	+0.1
2,128,827	-		PfGW456L13_1938	0.41	+1.0
2,128,827	-		PfGW456L13_1938	0.41	+0.2
2,128,827	-		PfGW456L13_1938	0.41	+1.0
2,128,827	-		PfGW456L13_1938	0.41	+1.7
2,129,011	-		PfGW456L13_1938	0.84	+0.9
2,129,011	-		PfGW456L13_1938	0.84	+1.2
2,129,011	-		PfGW456L13_1938	0.84	-0.0
2,129,011	-		PfGW456L13_1938	0.84	+0.9
2,129,016	+		PfGW456L13_1938	0.85	+0.2
2,129,016	+		PfGW456L13_1938	0.85	-0.1
2,129,016	+		PfGW456L13_1938	0.85	-0.5
2,129,016	+		PfGW456L13_1938	0.85	+1.1
2,129,016	+		PfGW456L13_1938	0.85	+0.5
2,129,016	+		PfGW456L13_1938	0.85	-0.5
2,129,016	+		PfGW456L13_1938	0.85	-3.8
2,129,017	-		PfGW456L13_1938	0.85	+0.1
2,129,017	-		PfGW456L13_1938	0.85	+0.6
2,129,017	-		PfGW456L13_1938	0.85	+0.5
2,129,017	-		PfGW456L13_1938	0.85	+0.3
2,129,017	-		PfGW456L13_1938	0.85	+0.1
2,129,022	+		PfGW456L13_1938	0.86	+0.7
2,129,023	-		PfGW456L13_1938	0.86	+0.1
2,129,034	+		PfGW456L13_1938	0.89	-1.1
2,129,034	+				+0.2
2,129,034	+		PfGW456L13_1938	0.89	+0.3
2,129,034	+		PfGW456L13_1938	0.89	+0.4
2,129,034	+		PfGW456L13_1938	0.89	+0.8
2,129,035	-		PfGW456L13_1938	0.89	+0.6
2,129,035	-		PfGW456L13_1938	0.89	-0.1
2,129,035	-		PfGW456L13_1938	0.89	+0.2
2,129,035	-		PfGW456L13_1938	0.89	+0.4
2,129,035	-		PfGW456L13_1938	0.89	+0.4
2,129,035	-		PfGW456L13_1938	0.89	+1.3
2,129,035	-		PfGW456L13_1938	0.89	+1.7
2,129,035	-		PfGW456L13_1938	0.89	+0.2
2,129,220	-				-0.3
2,129,311	-		PfGW456L13_1939	0.15	+0.6
2,129,357	+		PfGW456L13_1939	0.21	+1.2
2,129,357	+		PfGW456L13_1939	0.21	+0.1
2,129,357	+		PfGW456L13_1939	0.21	-0.4
2,129,357	+		PfGW456L13_1939	0.21	-1.2
2,129,357	+		PfGW456L13_1939	0.21	+1.1
2,129,357	+		PfGW456L13_1939	0.21	-1.1
2,129,357	+		PfGW456L13_1939	0.21	-0.1
2,129,358	-		PfGW456L13_1939	0.21	-1.1
2,129,358	-		PfGW456L13_1939	0.21	+1.4
2,129,358	-		PfGW456L13_1939	0.21	+0.3
2,129,358	-		PfGW456L13_1939	0.21	+0.6
2,129,358	-		PfGW456L13_1939	0.21	+0.3
2,129,397	-		PfGW456L13_1939	0.26	+0.0
2,129,702	+		PfGW456L13_1939	0.69	-0.8
2,129,702	+		PfGW456L13_1939	0.69	+0.6
2,129,702	+		PfGW456L13_1939	0.69	-0.1
2,129,702	+		PfGW456L13_1939	0.69	+0.4
2,129,702	+		PfGW456L13_1939	0.69	-1.0
2,129,703	-		PfGW456L13_1939	0.69	+0.1
2,129,703	-		PfGW456L13_1939	0.69	+0.1
2,129,703	-		PfGW456L13_1939	0.69	+0.4
2,129,703	-		PfGW456L13_1939	0.69	-0.3
2,129,703	-		PfGW456L13_1939	0.69	-0.6
2,129,703	-		PfGW456L13_1939	0.69	+0.7
2,129,703	-		PfGW456L13_1939	0.69	-0.5
2,129,703	-		PfGW456L13_1939	0.69	+0.1
2,129,703	-		PfGW456L13_1939	0.69	+0.7
2,129,703	-		PfGW456L13_1939	0.69	-0.2
2,129,703	-		PfGW456L13_1939	0.69	-0.3
2,129,703	-		PfGW456L13_1939	0.69	+0.6
2,129,703	-		PfGW456L13_1939	0.69	-0.6
2,129,703	-		PfGW456L13_1939	0.69	-1.2
2,129,703	-		PfGW456L13_1939	0.69	+0.4
2,129,703	-		PfGW456L13_1939	0.69	+0.4
2,129,726	+		PfGW456L13_1939	0.72	+0.4
2,129,726	+		PfGW456L13_1939	0.72	+0.1
2,129,726	+		PfGW456L13_1939	0.72	+0.7
2,129,726	+		PfGW456L13_1939	0.72	+0.6
2,129,726	+		PfGW456L13_1939	0.72	-2.3
2,129,726	+		PfGW456L13_1939	0.72	+0.4
2,129,727	-		PfGW456L13_1939	0.72	-0.3
2,129,727	-		PfGW456L13_1939	0.72	-0.3
2,129,727	-		PfGW456L13_1939	0.72	+0.2
2,129,846	+		PfGW456L13_1939	0.89	+0.7
2,129,877	+				-0.4
2,129,971	+				+0.5
2,129,971	+				-0.2
2,129,972	-				-1.1
2,129,972	-				-1.3
2,129,972	-				-0.3
2,129,972	-				+1.6
2,130,095	-		PfGW456L13_1940	0.20	-1.0
2,130,355	+		PfGW456L13_1940	0.50	+0.0
2,130,355	+		PfGW456L13_1940	0.50	-2.8
2,130,356	-		PfGW456L13_1940	0.50	+0.3
2,130,371	+		PfGW456L13_1940	0.51	-1.6
2,130,371	+		PfGW456L13_1940	0.51	-0.4
2,130,421	+		PfGW456L13_1940	0.57	-0.3
2,130,428	-		PfGW456L13_1940	0.58	-0.1
2,130,448	+		PfGW456L13_1940	0.60	-1.0
2,130,449	-		PfGW456L13_1940	0.60	-0.8
2,130,449	-		PfGW456L13_1940	0.60	+1.5
2,130,454	+		PfGW456L13_1940	0.61	+1.2
2,130,454	+		PfGW456L13_1940	0.61	+0.0
2,130,454	+		PfGW456L13_1940	0.61	+0.5
2,130,455	-		PfGW456L13_1940	0.61	-0.4
2,130,455	-		PfGW456L13_1940	0.61	-0.7
2,130,455	-		PfGW456L13_1940	0.61	-0.4
2,130,705	+				+1.3
2,130,705	+				-0.9
2,130,705	+				+0.4
2,130,706	-				+0.2
2,130,726	-				+0.9
2,130,737	-				+0.1
2,130,737	-				+0.3
2,130,749	+				-1.3
2,130,750	-				+0.7
2,130,781	+				-1.6
2,130,781	+				-0.4
2,130,781	+				-0.9
2,130,781	+				+0.2
2,130,781	+				-0.4
2,130,781	+				-0.6
2,130,781	+				-0.9
2,130,781	+				-0.1
2,130,781	+				-0.0
2,130,807	+				-0.1
2,130,808	-				+1.5
2,130,808	-				+0.4
2,130,808	-				-0.7
2,130,821	+				-1.2
2,130,822	-				+0.4
2,130,822	-				+0.0
2,130,822	-				+1.2
2,130,822	-				+0.3
2,130,822	-				+1.0
2,130,878	-				+0.3
2,130,878	-				+0.0
2,130,878	-				+0.6
2,130,878	-				+0.5