Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4509

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
5,383,993	-				+1.9
5,383,994	+				+0.4
5,383,995	-				+1.2
5,383,995	-				+0.8
5,384,008	+				-1.3
5,384,009	-				-0.5
5,384,075	-		Echvi_4508	0.16	-1.2
5,384,075	-		Echvi_4508	0.16	+1.5
5,384,076	+		Echvi_4508	0.16	-1.2
5,384,077	-		Echvi_4508	0.16	-0.1
5,384,186	+		Echvi_4508	0.27	+0.9
5,384,186	+		Echvi_4508	0.27	-1.4
5,384,187	-		Echvi_4508	0.27	-1.3
5,384,187	-		Echvi_4508	0.27	-2.0
5,384,187	-		Echvi_4508	0.27	+1.4
5,384,187	-		Echvi_4508	0.27	+0.7
5,384,275	-		Echvi_4508	0.36	-0.2
5,384,299	-		Echvi_4508	0.38	+0.8
5,384,374	-		Echvi_4508	0.45	+3.3
5,384,382	+		Echvi_4508	0.46	-0.7
5,384,393	-		Echvi_4508	0.47	+0.7
5,384,464	+		Echvi_4508	0.54	-1.3
5,384,465	-		Echvi_4508	0.54	-1.6
5,384,509	+		Echvi_4508	0.59	-0.9
5,384,527	+		Echvi_4508	0.60	-0.1
5,384,528	-		Echvi_4508	0.60	-0.9
5,384,542	+		Echvi_4508	0.62	-1.4
5,384,542	+		Echvi_4508	0.62	-2.9
5,384,584	+		Echvi_4508	0.66	-1.5
5,384,585	-		Echvi_4508	0.66	-2.0
5,384,681	-		Echvi_4508	0.75	-1.7
5,384,681	-		Echvi_4508	0.75	-1.7
5,384,759	+		Echvi_4508	0.83	-2.4
5,384,844	-				+1.1
5,384,929	+				-2.4
5,384,941	+				-1.5
5,384,942	-				+0.0
5,384,952	+				+0.4
5,384,953	-				+0.3
5,384,953	-				-1.7
5,384,958	+				+0.3
5,384,959	-				-2.0
5,385,008	-				+2.3
5,385,026	+		Echvi_4509	0.11	-0.9
5,385,026	+		Echvi_4509	0.11	-2.2
5,385,027	-		Echvi_4509	0.11	+0.6
5,385,027	-		Echvi_4509	0.11	+1.6
5,385,027	-		Echvi_4509	0.11	+0.2
5,385,047	+		Echvi_4509	0.14	+2.3
5,385,047	+		Echvi_4509	0.14	+0.8
5,385,048	-		Echvi_4509	0.14	-1.1
5,385,048	-		Echvi_4509	0.14	-2.4
5,385,056	+		Echvi_4509	0.15	+0.2
5,385,059	+		Echvi_4509	0.15	-0.0
5,385,059	+		Echvi_4509	0.15	+0.1
5,385,060	-		Echvi_4509	0.15	-1.9
5,385,060	-		Echvi_4509	0.15	-2.0
5,385,142	+		Echvi_4509	0.25	-3.1
5,385,161	+		Echvi_4509	0.27	-1.4
5,385,168	+		Echvi_4509	0.28	-0.1
5,385,168	+		Echvi_4509	0.28	+0.7
5,385,169	-		Echvi_4509	0.28	+1.3
5,385,170	+		Echvi_4509	0.29	-1.2
5,385,178	+		Echvi_4509	0.29	-1.5
5,385,193	+		Echvi_4509	0.31	-1.3
5,385,194	-		Echvi_4509	0.31	-4.3
5,385,206	-		Echvi_4509	0.33	+0.3
5,385,212	+		Echvi_4509	0.34	-2.0
5,385,212	+		Echvi_4509	0.34	-1.0
5,385,244	+		Echvi_4509	0.37	-0.7
5,385,244	+		Echvi_4509	0.37	+5.1
5,385,244	+		Echvi_4509	0.37	-2.9
5,385,245	-		Echvi_4509	0.38	-1.7
5,385,245	-		Echvi_4509	0.38	+0.7
5,385,245	-		Echvi_4509	0.38	+0.5
5,385,286	-		Echvi_4509	0.42	+2.8
5,385,286	-		Echvi_4509	0.42	-1.0
5,385,313	+		Echvi_4509	0.46	+1.3
5,385,344	-		Echvi_4509	0.49	+1.7
5,385,344	-		Echvi_4509	0.49	+1.3
5,385,353	+		Echvi_4509	0.51	-1.4
5,385,354	-		Echvi_4509	0.51	-0.2
5,385,359	+		Echvi_4509	0.51	+2.3
5,385,360	-		Echvi_4509	0.51	-2.7
5,385,413	-		Echvi_4509	0.58	-2.1
5,385,454	-		Echvi_4509	0.63	-1.5
5,385,454	-		Echvi_4509	0.63	+1.4
5,385,456	-		Echvi_4509	0.63	+0.6
5,385,462	-		Echvi_4509	0.64	-2.0
5,385,462	-		Echvi_4509	0.64	-1.0
5,385,462	-		Echvi_4509	0.64	-2.6
5,385,588	+		Echvi_4509	0.79	-0.3
5,385,609	-		Echvi_4509	0.81	+1.7
5,385,629	-		Echvi_4509	0.84	-0.3
5,385,684	-				+1.0
5,385,701	+				-2.0
5,385,702	-				+0.3
5,385,719	-				+0.3
5,385,719	-				+2.0
5,385,793	+				-2.0
5,385,876	+				-1.7
5,385,953	+		Echvi_4510	0.15	+2.9
5,385,955	+		Echvi_4510	0.15	+1.1
5,385,956	-		Echvi_4510	0.15	+1.6
5,386,080	+		Echvi_4510	0.25	+0.7
5,386,101	+		Echvi_4510	0.27	-0.0
5,386,102	-		Echvi_4510	0.27	+0.8
5,386,228	+		Echvi_4510	0.37	-0.5
5,386,228	+		Echvi_4510	0.37	-0.5
5,386,228	+		Echvi_4510	0.37	+1.1
5,386,229	-		Echvi_4510	0.37	-1.8
5,386,229	-		Echvi_4510	0.37	+1.1
5,386,371	+		Echvi_4510	0.49	+0.9
5,386,371	+		Echvi_4510	0.49	-0.0
5,386,412	+		Echvi_4510	0.52	+2.7
5,386,498	-		Echvi_4510	0.60	-0.7
5,386,633	-		Echvi_4510	0.71	+0.1