Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4225

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
5,063,427	+		Echvi_4224	0.35	+2.8
5,063,427	+		Echvi_4224	0.35	-0.5
5,063,427	+		Echvi_4224	0.35	-2.8
5,063,430	-		Echvi_4224	0.35	+1.5
5,063,452	-		Echvi_4224	0.37	+1.3
5,063,456	+		Echvi_4224	0.37	+0.5
5,063,457	-		Echvi_4224	0.37	+0.9
5,063,457	-		Echvi_4224	0.37	-0.4
5,063,477	+		Echvi_4224	0.38	-1.8
5,063,478	-		Echvi_4224	0.38	+1.0
5,063,724	+		Echvi_4224	0.56	+3.0
5,063,725	-		Echvi_4224	0.56	-0.9
5,063,725	-		Echvi_4224	0.56	+0.9
5,063,785	-		Echvi_4224	0.61	-2.0
5,063,847	+		Echvi_4224	0.65	-0.3
5,063,847	+		Echvi_4224	0.65	+3.3
5,063,847	+		Echvi_4224	0.65	+1.5
5,063,848	-		Echvi_4224	0.65	+1.9
5,063,848	-		Echvi_4224	0.65	+0.9
5,063,930	+		Echvi_4224	0.71	+0.7
5,063,931	-		Echvi_4224	0.71	-0.4
5,063,931	-		Echvi_4224	0.71	+1.1
5,063,931	-		Echvi_4224	0.71	-1.2
5,063,973	+		Echvi_4224	0.74	+0.3
5,063,999	+		Echvi_4224	0.76	+2.3
5,064,064	+		Echvi_4224	0.81	+0.5
5,064,064	+		Echvi_4224	0.81	+0.6
5,064,064	+		Echvi_4224	0.81	+2.2
5,064,068	+		Echvi_4224	0.81	-1.0
5,064,069	-		Echvi_4224	0.81	+1.0
5,064,069	-		Echvi_4224	0.81	+2.6
5,064,095	-		Echvi_4224	0.83	-2.2
5,064,143	+		Echvi_4224	0.87	-0.5
5,064,159	+		Echvi_4224	0.88	+0.9
5,064,291	-				+2.3
5,064,291	-				-0.1
5,064,294	+				+3.4
5,064,294	+				+0.3
5,064,295	-				+0.5
5,064,295	-				+1.6
5,064,303	+				-3.8
5,064,304	-				+1.6
5,064,315	+				-2.6
5,064,324	+				+0.4
5,064,457	-				-2.1
5,064,600	+		Echvi_4225	0.16	+1.7
5,064,600	+		Echvi_4225	0.16	-0.7
5,064,600	+		Echvi_4225	0.16	+1.7
5,064,600	+		Echvi_4225	0.16	+0.3
5,064,601	-		Echvi_4225	0.17	-2.9
5,064,601	-		Echvi_4225	0.17	-1.2
5,064,601	-		Echvi_4225	0.17	+2.6
5,064,601	-		Echvi_4225	0.17	-1.3
5,064,603	-		Echvi_4225	0.17	-3.3
5,064,673	-		Echvi_4225	0.21	-0.0
5,064,698	-		Echvi_4225	0.22	-0.0
5,064,761	+		Echvi_4225	0.26	-1.9
5,064,761	+		Echvi_4225	0.26	-1.5
5,064,768	+		Echvi_4225	0.27	-1.2
5,064,768	+		Echvi_4225	0.27	-3.2
5,064,769	-		Echvi_4225	0.27	-0.0
5,064,927	+		Echvi_4225	0.37	-0.1
5,065,058	+		Echvi_4225	0.45	-2.8
5,065,059	-		Echvi_4225	0.45	-0.5
5,065,059	-		Echvi_4225	0.45	+0.8
5,065,060	+		Echvi_4225	0.45	-1.0
5,065,060	+		Echvi_4225	0.45	-2.4
5,065,060	+		Echvi_4225	0.45	+0.5
5,065,061	-		Echvi_4225	0.45	-3.6
5,065,061	-		Echvi_4225	0.45	-0.7
5,065,061	-		Echvi_4225	0.45	+0.5
5,065,228	-		Echvi_4225	0.55	+3.7
5,065,243	+		Echvi_4225	0.56	+0.8
5,065,244	-		Echvi_4225	0.56	-0.2
5,065,249	-		Echvi_4225	0.56	-0.1
5,065,249	-		Echvi_4225	0.56	+0.1
5,065,275	-		Echvi_4225	0.58	+1.1
5,065,287	+		Echvi_4225	0.59	+0.7
5,065,288	-		Echvi_4225	0.59	+1.3
5,065,288	-		Echvi_4225	0.59	+0.7
5,065,382	+		Echvi_4225	0.64	-2.8
5,065,386	+		Echvi_4225	0.65	-2.2
5,065,386	+		Echvi_4225	0.65	-2.1
5,065,387	-		Echvi_4225	0.65	-1.2
5,065,387	-		Echvi_4225	0.65	+3.0
5,065,387	-		Echvi_4225	0.65	+0.2
5,065,387	-		Echvi_4225	0.65	-1.2
5,065,389	-		Echvi_4225	0.65	+3.5
5,065,444	+		Echvi_4225	0.68	-1.3
5,065,444	+		Echvi_4225	0.68	-0.0
5,065,445	-		Echvi_4225	0.68	+2.4
5,065,445	-		Echvi_4225	0.68	-1.0
5,065,449	-		Echvi_4225	0.69	-0.8
5,065,487	+		Echvi_4225	0.71	-0.9
5,065,488	-		Echvi_4225	0.71	+1.1
5,065,496	+		Echvi_4225	0.71	-2.2
5,065,508	-		Echvi_4225	0.72	-1.7
5,065,508	-		Echvi_4225	0.72	+0.6
5,065,629	+		Echvi_4225	0.80	-0.0
5,065,629	+		Echvi_4225	0.80	+1.1
5,065,630	-		Echvi_4225	0.80	+1.0
5,065,630	-		Echvi_4225	0.80	+3.3
5,065,630	-		Echvi_4225	0.80	+5.6
5,065,630	-		Echvi_4225	0.80	+1.6
5,065,630	-		Echvi_4225	0.80	+0.6
5,065,630	-		Echvi_4225	0.80	-2.4
5,065,785	+		Echvi_4225	0.89	+2.0
5,065,862	-				-2.8
5,065,911	+				+0.7
5,065,911	+				-0.4
5,065,911	+				-1.6
5,065,913	+				-1.8
5,065,913	+				+0.2
5,065,913	+				+2.6
5,065,913	+				-2.4
5,065,913	+				-3.6
5,065,956	+				+0.3
5,065,956	+				-0.3
5,065,974	-				-0.9
5,065,997	+				-1.7
5,066,199	+				+0.0
5,066,200	-				+1.9
5,066,374	+				-2.4
5,066,402	-				+2.0
5,066,432	-				+2.4
5,066,432	-				-2.2
5,066,465	+				+0.0
5,066,465	+				-1.2
5,066,465	+				+1.1
5,066,490	+				+1.2
5,066,490	+				-0.7
5,066,491	-				+0.6
5,066,495	-				-1.8
5,066,580	-		Echvi_4226	0.44	+3.9
5,066,648	-		Echvi_4226	0.78	-1.0
5,066,705	+				+2.0
5,066,706	-				+2.3
5,066,738	+				+2.9
5,066,738	+				-1.0
5,066,739	-				+2.7