Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3908

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,668,982	-				-1.1
4,668,982	-				-0.6
4,669,013	+				-2.2
4,669,045	-				-1.1
4,669,103	+				+1.8
4,669,118	-				-0.5
4,669,118	-				-2.3
4,669,119	+				+2.3
4,669,218	+				-1.6
4,669,354	+				+0.1
4,669,371	+				+2.5
4,669,372	-				-1.6
4,669,392	+				+1.8
4,669,392	+				+0.4
4,669,392	+				+0.6
4,669,393	-				-0.5
4,669,938	-				+0.5
4,670,003	+				-3.5
4,670,003	+				+1.0
4,670,003	+				-0.0
4,670,003	+				-2.3
4,670,003	+				+1.8
4,670,004	-				-3.4
4,670,092	+				-1.9
4,670,124	+				+0.3
4,670,130	-				+0.1
4,670,242	+		Echvi_3908	0.12	+0.3
4,670,242	+		Echvi_3908	0.12	+0.4
4,670,243	-		Echvi_3908	0.12	-0.7
4,670,365	+		Echvi_3908	0.18	+2.5
4,670,371	+		Echvi_3908	0.18	-2.7
4,670,372	-		Echvi_3908	0.18	-2.6
4,670,407	+		Echvi_3908	0.19	-2.1
4,670,407	+		Echvi_3908	0.19	-1.5
4,670,407	+		Echvi_3908	0.19	+0.2
4,670,408	-		Echvi_3908	0.19	-0.2
4,670,435	+		Echvi_3908	0.21	+0.3
4,670,557	+		Echvi_3908	0.26	-0.0
4,670,589	-		Echvi_3908	0.27	-1.7
4,670,739	+		Echvi_3908	0.34	-0.1
4,670,782	+		Echvi_3908	0.36	-0.1
4,670,783	-		Echvi_3908	0.36	-1.0
4,670,830	+		Echvi_3908	0.38	-2.9
4,670,831	-		Echvi_3908	0.38	+0.9
4,670,831	-		Echvi_3908	0.38	-2.4
4,670,844	-		Echvi_3908	0.38	+2.1
4,670,844	-		Echvi_3908	0.38	-1.7
4,670,845	+		Echvi_3908	0.38	+1.2
4,670,845	+		Echvi_3908	0.38	+1.0
4,670,845	+		Echvi_3908	0.38	+0.1
4,670,846	-		Echvi_3908	0.38	+0.9
4,670,866	+		Echvi_3908	0.39	-3.1
4,670,866	+		Echvi_3908	0.39	-0.1
4,670,963	+		Echvi_3908	0.44	+1.3
4,670,964	-		Echvi_3908	0.44	-0.1
4,670,998	+		Echvi_3908	0.45	+1.4
4,670,999	-		Echvi_3908	0.45	-0.9
4,671,010	-		Echvi_3908	0.46	-1.2
4,671,061	-		Echvi_3908	0.48	+2.1
4,671,143	+		Echvi_3908	0.51	-0.2
4,671,241	+		Echvi_3908	0.56	-0.1
4,671,241	+		Echvi_3908	0.56	+0.8
4,671,242	-		Echvi_3908	0.56	+0.1
4,671,242	-		Echvi_3908	0.56	+2.1
4,671,242	-		Echvi_3908	0.56	+0.8
4,671,300	-		Echvi_3908	0.58	-0.1
4,671,398	+		Echvi_3908	0.62	-0.9
4,671,554	-		Echvi_3908	0.69	+1.1
4,671,568	+		Echvi_3908	0.70	+0.1
4,671,764	+		Echvi_3908	0.78	+1.7
4,671,764	+		Echvi_3908	0.78	+0.5
4,671,764	+		Echvi_3908	0.78	-1.2
4,671,764	+				+1.1
4,671,774	+		Echvi_3908	0.79	-2.1
4,671,774	+		Echvi_3908	0.79	-0.9
4,671,775	-		Echvi_3908	0.79	-0.7
4,671,817	+		Echvi_3908	0.81	+0.8
4,671,818	-		Echvi_3908	0.81	-0.2
4,671,818	-		Echvi_3908	0.81	-0.7
4,671,838	+		Echvi_3908	0.81	+0.7
4,671,838	+		Echvi_3908	0.81	-1.1
4,671,841	+		Echvi_3908	0.82	-0.1
4,671,842	-		Echvi_3908	0.82	+3.3
4,672,002	-		Echvi_3908	0.89	+0.6
4,672,028	-		Echvi_3908	0.90	+1.0
4,672,028	-		Echvi_3908	0.90	-2.5
4,672,028	-		Echvi_3908	0.90	-0.8
4,672,051	+				-0.1
4,672,053	+				-2.4
4,672,054	-				+1.1
4,672,054	-				-0.7
4,672,084	+				+2.3
4,672,227	+				-1.9
4,672,240	-				-0.7
4,672,251	+				-2.0
4,672,252	-				+0.5
4,672,282	+				-0.5
4,672,283	-				-1.7
4,672,283	-				-2.6
4,672,283	-				+0.1
4,672,313	+				-1.6
4,672,313	+				-2.7
4,672,314	-				-0.1
4,672,314	-				-0.5
4,672,314	-				-2.9
4,672,314	-				-1.0
4,672,317	+				-2.2
4,672,331	-				-0.1
4,672,504	+				+1.3
4,672,528	-				-1.2
4,672,568	+				+2.2
4,672,590	+				+1.5
4,672,591	-				-0.3
4,672,596	-				-2.2
4,672,606	+				+1.4
4,672,610	+				+0.2
4,672,611	-				-1.5
4,672,611	-				-1.7
4,672,611	-				+1.1
4,672,611	-				-2.4
4,672,611	-				-0.3
4,672,613	+				-1.5
4,672,613	+				+1.4
4,672,614	-				-2.8
4,672,614	-				-1.7
4,672,614	-				-1.9
4,672,617	+				+3.2
4,672,617	+				-1.4
4,672,617	+				-2.4
4,672,621	-				-1.3
4,672,627	+				-3.9
4,672,627	+				-0.2
4,672,628	-				-1.0
4,672,631	+				+1.9
4,672,637	+				-2.1
4,672,638	-				+0.8
4,672,638	-				+0.0
4,672,701	+				-0.9
4,672,703	+				-0.5
4,672,703	+				+0.7
4,672,709	+				-0.0
4,672,709	+				-0.8
4,672,709	+				-1.4
4,672,710	-				+2.4
4,672,765	+				+1.3
4,672,766	-				-2.6
4,672,784	-				+0.6
4,672,909	+		Echvi_3909	0.18	+1.9
4,672,909	+		Echvi_3909	0.18	-0.5
4,672,910	-		Echvi_3909	0.18	-1.8
4,672,966	+		Echvi_3909	0.22	-1.5
4,672,967	-		Echvi_3909	0.22	+3.0
4,673,060	+		Echvi_3909	0.29	-1.4
4,673,061	-		Echvi_3909	0.29	+1.0
4,673,087	+		Echvi_3909	0.30	+3.2
4,673,090	+		Echvi_3909	0.31	+2.1
4,673,090	+		Echvi_3909	0.31	+1.2
4,673,090	+		Echvi_3909	0.31	+0.4
4,673,090	+		Echvi_3909	0.31	-0.4
4,673,090	+		Echvi_3909	0.31	+0.9
4,673,091	-		Echvi_3909	0.31	-1.8
4,673,091	-		Echvi_3909	0.31	+0.4
4,673,091	-		Echvi_3909	0.31	+0.0
4,673,091	-		Echvi_3909	0.31	+0.1
4,673,102	+		Echvi_3909	0.32	+0.9
4,673,102	+		Echvi_3909	0.32	-2.2
4,673,102	+		Echvi_3909	0.32	-2.0
4,673,102	+		Echvi_3909	0.32	+0.6
4,673,102	+		Echvi_3909	0.32	+1.7
4,673,103	-		Echvi_3909	0.32	-2.4
4,673,103	-		Echvi_3909	0.32	-2.4
4,673,103	-		Echvi_3909	0.32	+0.5
4,673,126	-		Echvi_3909	0.33	-1.1
4,673,126	-		Echvi_3909	0.33	-1.7
4,673,126	-		Echvi_3909	0.33	-1.2