Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3878

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,633,205	+				+1.2
4,633,254	-				-1.4
4,633,261	-				-2.3
4,633,261	-				-3.1
4,633,319	-				-0.5
4,633,347	+				+0.1
4,633,350	+				+0.7
4,633,418	-				-3.2
4,633,418	-				-1.5
4,633,552	-				+0.1
4,633,552	-				+2.5
4,633,552	-				+2.1
4,633,620	+				-2.7
4,633,632	+				+1.1
4,633,632	+				-2.3
4,633,632	+				-1.3
4,633,632	+				+1.8
4,633,632	+				+2.1
4,633,633	-				-1.2
4,633,634	+				-3.1
4,633,635	-				+1.8
4,633,658	+				+0.1
4,633,667	+				-1.7
4,633,667	+				-2.5
4,633,718	+				-0.9
4,633,721	-				+2.3
4,633,721	-				-2.0
4,633,721	-				-1.3
4,633,721	-				+0.6
4,633,794	+				-4.6
4,633,804	+				+1.2
4,633,835	-				+1.0
4,633,962	+				-2.4
4,633,983	+				-0.8
4,633,983	+				+0.3
4,633,983	+				-1.8
4,633,984	-				-1.7
4,634,073	-				-2.9
4,634,104	+				-1.8
4,634,104	+				-2.6
4,634,108	-				-2.8
4,634,142	-				+0.8
4,634,156	-				+0.2
4,634,159	+				+0.8
4,634,159	+				-1.2
4,634,168	+				+2.0
4,634,217	-				+0.5
4,634,463	+		Echvi_3878	0.47	-2.0
4,634,551	-		Echvi_3878	0.61	+0.5
4,634,675	-		Echvi_3878	0.80	-0.5
4,634,800	-				-2.4
4,634,817	+				-2.2
4,634,818	-				-3.0
4,634,821	+				-0.9
4,634,871	+				-2.8
4,634,955	+				+0.5
4,634,956	-				+1.6
4,634,984	+				-0.3
4,634,984	+				-3.3
4,634,984	+				-1.7
4,634,985	-				-2.1
4,635,001	+				-0.2
4,635,067	+				-1.7
4,635,067	+				+1.5
4,635,067	+				+0.5
4,635,067	+				-0.1
4,635,067	+				-3.1
4,635,068	-				+1.4
4,635,068	-				+3.1
4,635,068	-				+1.5
4,635,077	+				+0.8
4,635,077	+				-1.1
4,635,078	-				+1.5
4,635,099	+				+0.3
4,635,141	-		Echvi_3879	0.12	-1.2
4,635,167	-		Echvi_3879	0.14	-1.7
4,635,213	-		Echvi_3879	0.17	-2.2
4,635,219	+		Echvi_3879	0.17	-1.6
4,635,219	+		Echvi_3879	0.17	+1.5
4,635,220	-		Echvi_3879	0.17	+2.2
4,635,298	+		Echvi_3879	0.22	+1.7
4,635,316	+		Echvi_3879	0.23	+1.2
4,635,316	+		Echvi_3879	0.23	+0.4
4,635,316	+		Echvi_3879	0.23	-2.3
4,635,316	+		Echvi_3879	0.23	-2.6
4,635,319	+		Echvi_3879	0.23	+1.9
4,635,319	+		Echvi_3879	0.23	+3.7
4,635,321	+		Echvi_3879	0.23	-1.6
4,635,322	-		Echvi_3879	0.23	-0.8
4,635,414	-		Echvi_3879	0.29	+1.0
4,635,425	+		Echvi_3879	0.30	-3.2
4,635,434	+		Echvi_3879	0.30	+1.0
4,635,434	+		Echvi_3879	0.30	-2.4
4,635,474	-		Echvi_3879	0.33	-0.8
4,635,491	+		Echvi_3879	0.34	-1.5
4,635,491	+		Echvi_3879	0.34	-3.1
4,635,539	+		Echvi_3879	0.37	-2.5
4,635,540	-		Echvi_3879	0.37	-0.9
4,635,540	-		Echvi_3879	0.37	-0.7
4,635,689	+		Echvi_3879	0.46	-1.8
4,635,689	+		Echvi_3879	0.46	-0.4
4,635,689	+		Echvi_3879	0.46	-2.0
4,635,692	+		Echvi_3879	0.46	+1.6
4,635,692	+		Echvi_3879	0.46	-1.1
4,635,692	+		Echvi_3879	0.46	-3.8
4,635,692	+		Echvi_3879	0.46	-1.5
4,635,693	-		Echvi_3879	0.46	-2.9
4,635,693	-		Echvi_3879	0.46	-0.3
4,635,693	-		Echvi_3879	0.46	+1.5
4,635,702	-		Echvi_3879	0.46	-0.9
4,635,715	-		Echvi_3879	0.47	+0.4
4,635,720	+		Echvi_3879	0.48	-1.7
4,635,721	-		Echvi_3879	0.48	-3.1
4,635,773	+		Echvi_3879	0.51	-0.2
4,635,773	+		Echvi_3879	0.51	-1.8
4,635,773	+		Echvi_3879	0.51	-2.4
4,635,774	-		Echvi_3879	0.51	-0.5
4,635,777	+		Echvi_3879	0.51	+0.8
4,635,777	+		Echvi_3879	0.51	-3.9
4,635,777	+		Echvi_3879	0.51	-2.8
4,635,778	-		Echvi_3879	0.51	-0.2
4,635,778	-		Echvi_3879	0.51	-2.2
4,635,778	-		Echvi_3879	0.51	+0.4
4,635,778	-		Echvi_3879	0.51	-1.1
4,635,780	+		Echvi_3879	0.51	+1.6
4,635,781	-		Echvi_3879	0.51	-1.2
4,635,791	+		Echvi_3879	0.52	+2.4
4,635,791	+		Echvi_3879	0.52	+2.5