Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3876

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,630,364	+		Echvi_3874	0.82	+1.5
4,630,368	+		Echvi_3874	0.83	+1.5
4,630,368	+		Echvi_3874	0.83	+1.3
4,630,368	+		Echvi_3874	0.83	+0.7
4,630,369	-		Echvi_3874	0.83	-1.3
4,630,369	-		Echvi_3874	0.83	+1.4
4,630,369	-		Echvi_3874	0.83	-0.5
4,630,396	-		Echvi_3874	0.86	-1.2
4,630,396	-		Echvi_3874	0.86	-2.9
4,630,464	+				-0.6
4,630,509	+				-0.3
4,630,515	-				+0.9
4,630,515	-				+1.8
4,630,538	+				+0.4
4,630,538	+				-2.4
4,630,545	+				+0.2
4,630,546	-				+0.3
4,630,635	+				+0.7
4,630,668	+				+1.7
4,630,679	+		Echvi_3875	0.11	+3.2
4,630,712	+		Echvi_3875	0.16	-2.9
4,630,712	+		Echvi_3875	0.16	-0.7
4,630,713	-		Echvi_3875	0.16	-1.9
4,630,713	-		Echvi_3875	0.16	-1.4
4,630,713	-		Echvi_3875	0.16	-1.2
4,630,713	-		Echvi_3875	0.16	+0.1
4,630,734	-		Echvi_3875	0.20	-0.2
4,630,769	+		Echvi_3875	0.25	+2.4
4,630,769	+		Echvi_3875	0.25	+0.7
4,630,769	+		Echvi_3875	0.25	-1.7
4,630,770	-		Echvi_3875	0.25	-0.7
4,630,836	+		Echvi_3875	0.36	-1.2
4,630,837	-		Echvi_3875	0.36	+0.9
4,630,837	-		Echvi_3875	0.36	-0.3
4,630,837	-		Echvi_3875	0.36	-2.2
4,630,908	+		Echvi_3875	0.47	+1.3
4,630,932	+		Echvi_3875	0.51	+2.0
4,630,935	+		Echvi_3875	0.52	+2.6
4,630,972	-		Echvi_3875	0.57	-1.1
4,630,972	-		Echvi_3875	0.57	-0.7
4,631,025	+		Echvi_3875	0.66	-0.5
4,631,026	-		Echvi_3875	0.66	+1.0
4,631,037	+		Echvi_3875	0.68	-1.2
4,631,058	+		Echvi_3875	0.71	+1.5
4,631,058	+		Echvi_3875	0.71	+1.7
4,631,058	+		Echvi_3875	0.71	-1.3
4,631,058	+		Echvi_3875	0.71	-0.9
4,631,058	+		Echvi_3875	0.71	+0.7
4,631,059	-		Echvi_3875	0.71	+2.3
4,631,059	-		Echvi_3875	0.71	+1.1
4,631,059	-		Echvi_3875	0.71	+0.3
4,631,059	-		Echvi_3875	0.71	+0.1
4,631,059	-		Echvi_3875	0.71	+0.8
4,631,059	-		Echvi_3875	0.71	+0.9
4,631,059	-		Echvi_3875	0.71	+0.5
4,631,059	-		Echvi_3875	0.71	+0.4
4,631,059	-		Echvi_3875	0.71	-0.0
4,631,177	+		Echvi_3875	0.90	-0.1
4,631,178	-				-0.2
4,631,188	-				-0.2
4,631,188	-				-0.6
4,631,188	-				-2.5
4,631,331	+		Echvi_3876	0.14	+2.5
4,631,332	-		Echvi_3876	0.14	-0.2
4,631,332	-		Echvi_3876	0.14	-0.2
4,631,335	+		Echvi_3876	0.15	-0.5
4,631,336	-		Echvi_3876	0.15	+0.4
4,631,341	+		Echvi_3876	0.16	+1.4
4,631,347	+		Echvi_3876	0.18	-2.2
4,631,353	+		Echvi_3876	0.19	+1.4
4,631,353	+		Echvi_3876	0.19	+1.4
4,631,353	+		Echvi_3876	0.19	-1.7
4,631,353	+		Echvi_3876	0.19	+1.1
4,631,353	+		Echvi_3876	0.19	+0.7
4,631,353	+		Echvi_3876	0.19	-0.1
4,631,358	-		Echvi_3876	0.21	-1.7
4,631,359	+		Echvi_3876	0.21	-1.5
4,631,360	-		Echvi_3876	0.21	+0.8
4,631,383	+		Echvi_3876	0.27	+1.7
4,631,384	-		Echvi_3876	0.28	-0.5
4,631,398	+		Echvi_3876	0.31	+2.5
4,631,399	-		Echvi_3876	0.32	+1.6
4,631,466	+		Echvi_3876	0.50	+1.2
4,631,467	-		Echvi_3876	0.50	-1.8
4,631,508	-		Echvi_3876	0.61	-0.4
4,631,556	-		Echvi_3876	0.74	+4.0
4,631,626	-				-0.7
4,631,636	+				-1.8
4,631,637	-				+0.1
4,631,643	+				+0.8
4,631,644	-				+0.7
4,631,656	+				+0.5
4,631,656	+				-0.9
4,631,657	-				+1.2
4,631,691	+				-0.9
4,631,692	-				-1.8
4,631,722	-				-0.7
4,631,752	-				-1.1
4,631,812	+		Echvi_3877	0.17	-1.2
4,631,829	+		Echvi_3877	0.20	-0.7
4,631,829	+		Echvi_3877	0.20	-3.0
4,631,830	-		Echvi_3877	0.21	+2.3
4,631,830	-		Echvi_3877	0.21	-0.3
4,631,862	-		Echvi_3877	0.27	+1.4
4,631,873	+		Echvi_3877	0.30	+2.0
4,631,873	+		Echvi_3877	0.30	+0.7
4,631,884	+		Echvi_3877	0.32	-0.6
4,631,884	+		Echvi_3877	0.32	+0.3
4,631,885	-		Echvi_3877	0.32	+0.7
4,631,885	-		Echvi_3877	0.32	-0.2
4,631,982	-		Echvi_3877	0.52	+0.1
4,632,122	+		Echvi_3877	0.81	-0.0
4,632,123	-		Echvi_3877	0.81	+0.5
4,632,210	+				-0.7
4,632,210	+				+0.5
4,632,210	+				-0.9
4,632,211	-				+2.3
4,632,255	-				+0.2
4,632,321	+				+1.7
4,632,321	+				+1.1
4,632,321	+				-2.5
4,632,322	-				+2.0
4,632,322	-				-0.6
4,632,322	-				-1.6
4,632,323	+				+1.9
4,632,323	+				+1.0
4,632,323	+				-1.8
4,632,323	+				+1.3
4,632,323	+				-2.3
4,632,323	+				+1.7
4,632,323	+				+0.7
4,632,324	-				+1.7
4,632,324	-				-0.7
4,632,324	-				+0.9
4,632,324	-				-1.9
4,632,324	-				+0.7
4,632,324	-				+0.5
4,632,324	-				-3.2
4,632,324	-				+0.7
4,632,330	-				-1.3
4,632,332	+				+0.2
4,632,333	-				-2.6
4,632,338	+				+1.2
4,632,338	+				+1.0
4,632,354	+				+2.1
4,632,355	-				+3.9
4,632,355	-				+1.2
4,632,359	+				+0.8
4,632,359	+				-0.7
4,632,359	+				+0.5
4,632,359	+				-0.9
4,632,360	-				-2.2
4,632,360	-				-2.8
4,632,360	-				+1.1
4,632,360	-				-0.2
4,632,360	-				-0.1
4,632,360	-				+1.0
4,632,360	-				+0.1
4,632,382	-				+1.3
4,632,561	-				-0.6