Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3815

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,556,024	+				+0.2
4,556,024	+				+1.5
4,556,080	+				+1.2
4,556,080	+				-1.5
4,556,081	-				+4.4
4,556,275	+		Echvi_3814	0.42	-0.4
4,556,275	+		Echvi_3814	0.42	+0.3
4,556,276	-		Echvi_3814	0.42	-0.0
4,556,276	-		Echvi_3814	0.42	+0.5
4,556,308	+		Echvi_3814	0.50	-0.2
4,556,309	-		Echvi_3814	0.50	-0.7
4,556,337	-		Echvi_3814	0.56	-0.5
4,556,364	-		Echvi_3814	0.63	+1.3
4,556,442	-		Echvi_3814	0.81	-1.7
4,556,442	-		Echvi_3814	0.81	-0.3
4,556,498	+				-0.9
4,556,502	+				+0.9
4,556,502	+				-2.3
4,556,502	+				+0.4
4,556,503	-				+1.2
4,556,522	+				+0.9
4,556,523	-				-0.9
4,556,576	+				+0.1
4,556,576	+				-1.4
4,556,576	+				+0.4
4,556,576	+				-2.1
4,556,577	-				-0.9
4,556,577	-				-0.6
4,556,581	+				+0.9
4,556,582	-				+0.4
4,556,585	+				+0.8
4,556,585	+				-0.2
4,556,585	+				-0.9
4,556,586	-				-1.6
4,556,586	-				-3.4
4,556,605	+				-1.2
4,556,605	+				-0.1
4,556,607	+				-0.0
4,556,608	-				-0.5
4,556,660	+				-1.7
4,556,667	-				+0.5
4,556,669	+				+0.3
4,556,669	+				-2.4
4,556,780	-				-2.7
4,556,797	-				-1.8
4,556,820	+				+0.4
4,556,827	-				+2.5
4,556,904	-				-1.9
4,556,904	-				-1.5
4,556,965	-				+1.2
4,557,002	+				+1.1
4,557,003	-				+1.2
4,557,064	+				+1.4
4,557,143	+		Echvi_3815	0.16	+0.7
4,557,174	+		Echvi_3815	0.19	-0.2
4,557,175	-		Echvi_3815	0.19	+0.8
4,557,236	-		Echvi_3815	0.25	+2.6
4,557,236	-		Echvi_3815	0.25	+0.8
4,557,236	-		Echvi_3815	0.25	+0.8
4,557,262	-		Echvi_3815	0.27	+0.5
4,557,262	-		Echvi_3815	0.27	-0.4
4,557,333	-		Echvi_3815	0.34	-2.2
4,557,353	+		Echvi_3815	0.35	-0.5
4,557,353	+		Echvi_3815	0.35	-0.3
4,557,353	+		Echvi_3815	0.35	-0.2
4,557,354	-		Echvi_3815	0.36	-1.2
4,557,354	-		Echvi_3815	0.36	-1.8
4,557,358	+		Echvi_3815	0.36	-4.0
4,557,359	-		Echvi_3815	0.36	-4.0
4,557,398	-		Echvi_3815	0.40	+0.5
4,557,439	-		Echvi_3815	0.43	-0.1
4,557,542	+		Echvi_3815	0.53	+1.1
4,557,543	-		Echvi_3815	0.53	-1.6
4,557,560	-		Echvi_3815	0.55	-2.7
4,557,560	-		Echvi_3815	0.55	-0.3
4,557,638	-		Echvi_3815	0.62	-0.3
4,557,745	+		Echvi_3815	0.72	+0.8
4,557,746	-		Echvi_3815	0.72	+0.6
4,557,758	-		Echvi_3815	0.73	+1.5
4,557,760	+		Echvi_3815	0.73	-3.1
4,557,760	+		Echvi_3815	0.73	-1.7
4,557,760	+		Echvi_3815	0.73	+1.1
4,557,772	+		Echvi_3815	0.74	-0.6
4,557,803	+		Echvi_3815	0.77	-2.4
4,557,821	-		Echvi_3815	0.79	+0.5
4,557,821	-		Echvi_3815	0.79	+0.2
4,557,837	-		Echvi_3815	0.80	+1.1
4,557,837	-		Echvi_3815	0.80	-3.0
4,557,861	+		Echvi_3815	0.82	+0.5
4,557,861	+		Echvi_3815	0.82	+0.5
4,557,862	-		Echvi_3815	0.83	-1.8
4,557,863	+		Echvi_3815	0.83	-3.0
4,557,863	+		Echvi_3815	0.83	+0.3
4,557,863	+		Echvi_3815	0.83	-1.5
4,557,864	-		Echvi_3815	0.83	-0.8
4,557,916	-		Echvi_3815	0.88	-0.9
4,557,917	+		Echvi_3815	0.88	-0.5
4,557,917	+		Echvi_3815	0.88	-0.5
4,557,917	+		Echvi_3815	0.88	-1.4
4,557,918	-		Echvi_3815	0.88	+0.0
4,557,969	+				-2.7
4,557,969	+				-0.1
4,557,972	+				+0.1
4,557,972	+				-2.9
4,557,972	+				+0.5
4,557,972	+				+1.3
4,557,972	+				+0.2
4,557,972	+				+3.1
4,557,973	-				+1.4
4,558,029	+				+0.9
4,558,029	+				-1.1
4,558,030	-				-0.1
4,558,061	+				-0.2
4,558,061	+				-0.9
4,558,061	+				+0.1
4,558,061	+				+1.5
4,558,062	-				+0.5
4,558,064	+				+0.1
4,558,105	+				-3.6
4,558,249	-				+1.1
4,558,258	-				+3.0
4,558,258	-				+3.3
4,558,259	+				-1.4
4,558,259	+				-1.1
4,558,259	+				-1.6
4,558,260	-				-2.4
4,558,260	-				+0.6
4,558,294	+		Echvi_3816	0.12	+2.2
4,558,294	+		Echvi_3816	0.12	+1.2
4,558,295	-		Echvi_3816	0.12	+0.2
4,558,295	-		Echvi_3816	0.12	-3.1
4,558,299	-		Echvi_3816	0.12	-0.7
4,558,313	-		Echvi_3816	0.13	+2.1
4,558,314	+		Echvi_3816	0.13	+1.5
4,558,314	+		Echvi_3816	0.13	+1.8
4,558,580	-		Echvi_3816	0.30	+0.6
4,558,581	+		Echvi_3816	0.30	-2.2
4,558,581	+		Echvi_3816	0.30	-0.2
4,558,582	-		Echvi_3816	0.30	-0.2
4,558,647	+		Echvi_3816	0.34	-1.8
4,558,744	+		Echvi_3816	0.41	+0.2
4,558,852	-		Echvi_3816	0.48	-0.8
4,558,853	+		Echvi_3816	0.48	-1.6
4,558,853	+		Echvi_3816	0.48	-2.4
4,558,853	+		Echvi_3816	0.48	-0.4
4,558,961	-		Echvi_3816	0.55	-3.4
4,558,967	+		Echvi_3816	0.55	-1.5
4,558,968	-		Echvi_3816	0.55	+1.1
4,558,997	-		Echvi_3816	0.57	+0.1
4,559,038	+		Echvi_3816	0.59	+1.4