Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3592

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,262,718	+				+1.2
4,262,718	+				-0.1
4,262,718	+				-1.3
4,262,719	-				-2.3
4,262,719	-				+0.7
4,262,724	+				-1.2
4,262,729	+				+0.4
4,262,767	+				-0.1
4,262,768	-				-2.6
4,262,781	+				+0.7
4,262,781	+				-1.8
4,262,790	+				+0.8
4,262,790	+				+0.3
4,262,791	-				-1.2
4,262,814	+				+0.9
4,262,814	+				-1.4
4,262,814	+				+0.4
4,262,837	+				-0.7
4,262,892	+		Echvi_3590	0.21	-1.1
4,262,931	+		Echvi_3590	0.30	-1.8
4,262,931	+		Echvi_3590	0.30	+1.4
4,262,932	-		Echvi_3590	0.30	-1.3
4,262,932	-		Echvi_3590	0.30	+0.4
4,262,953	+		Echvi_3590	0.35	-0.3
4,262,970	-		Echvi_3590	0.39	+0.5
4,262,974	+		Echvi_3590	0.40	+0.4
4,262,975	-		Echvi_3590	0.41	-0.7
4,262,975	-		Echvi_3590	0.41	+0.9
4,263,003	-		Echvi_3590	0.47	-1.9
4,263,052	-		Echvi_3590	0.59	-0.6
4,263,059	+		Echvi_3590	0.61	-1.6
4,263,059	+		Echvi_3590	0.61	+1.4
4,263,063	+		Echvi_3590	0.62	+0.1
4,263,064	-		Echvi_3590	0.62	+1.7
4,263,096	+		Echvi_3590	0.70	+0.2
4,263,121	-		Echvi_3590	0.76	-0.6
4,263,214	-				-0.3
4,263,214	-				+0.4
4,263,234	+				-4.2
4,263,237	+				-0.1
4,263,237	+				-2.6
4,263,237	+				+0.6
4,263,238	-				-3.4
4,263,281	+		Echvi_3591	0.19	-0.4
4,263,281	+		Echvi_3591	0.19	-0.4
4,263,282	-		Echvi_3591	0.19	-3.4
4,263,282	-		Echvi_3591	0.19	+1.4
4,263,284	+		Echvi_3591	0.20	-1.4
4,263,285	-		Echvi_3591	0.20	-0.5
4,263,285	-		Echvi_3591	0.20	-0.3
4,263,291	+		Echvi_3591	0.22	-3.7
4,263,406	-		Echvi_3591	0.62	-1.1
4,263,488	+				+0.8
4,263,500	+				+0.7
4,263,501	-				-0.2
4,263,529	-				+3.2
4,263,532	-				+2.9
4,263,532	-				-2.1
4,263,532	-				+1.4
4,263,545	+				-0.6
4,263,618	+				-0.0
4,263,618	+				+1.3
4,263,619	-				+0.1
4,263,673	+				-1.9
4,263,695	+				+2.5
4,263,719	+				-0.5
4,263,719	+				-0.2
4,263,719	+				+1.4
4,263,719	+				+0.4
4,263,720	-				+0.9
4,263,720	-				+1.7
4,263,767	+				+0.1
4,263,768	-				+1.9
4,263,768	-				-1.2
4,263,817	+				-1.1
4,263,845	-		Echvi_3592	0.10	-0.9
4,263,892	+		Echvi_3592	0.13	-2.4
4,263,976	+		Echvi_3592	0.18	+1.8
4,264,102	+		Echvi_3592	0.25	+0.9
4,264,109	+		Echvi_3592	0.25	-2.0
4,264,139	-		Echvi_3592	0.27	-0.3
4,264,214	-		Echvi_3592	0.31	-1.2
4,264,226	+		Echvi_3592	0.32	+1.7
4,264,227	-		Echvi_3592	0.32	-2.4
4,264,306	+		Echvi_3592	0.36	+1.9
4,264,386	-		Echvi_3592	0.41	-1.8
4,264,397	-		Echvi_3592	0.42	+0.1
4,264,433	+		Echvi_3592	0.44	-1.6
4,264,473	-		Echvi_3592	0.46	-2.3
4,264,610	+		Echvi_3592	0.54	-0.0
4,264,611	-		Echvi_3592	0.54	+0.9
4,264,613	+		Echvi_3592	0.54	-0.4
4,264,655	+		Echvi_3592	0.56	-2.4
4,264,906	+		Echvi_3592	0.71	-0.3
4,264,954	+		Echvi_3592	0.74	-1.1
4,264,955	-		Echvi_3592	0.74	-0.6
4,265,031	+		Echvi_3592	0.78	+0.2
4,265,032	-		Echvi_3592	0.78	-0.8
4,265,074	+		Echvi_3592	0.80	-0.4
4,265,125	+		Echvi_3592	0.83	-1.6
4,265,137	+		Echvi_3592	0.84	-0.3
4,265,140	+		Echvi_3592	0.84	-2.5
4,265,141	-		Echvi_3592	0.84	-0.6
4,265,141	-		Echvi_3592	0.84	-1.8
4,265,173	-		Echvi_3592	0.86	+1.1
4,265,231	-		Echvi_3592	0.89	+0.4
4,265,408	-				-2.1
4,265,408	-				+0.9
4,265,408	-				-2.4
4,265,514	-		Echvi_3593	0.15	+0.8
4,265,528	+		Echvi_3593	0.17	+2.6
4,265,528	+		Echvi_3593	0.17	-1.6
4,265,528	+		Echvi_3593	0.17	-2.1
4,265,528	+		Echvi_3593	0.17	-2.0
4,265,528	+		Echvi_3593	0.17	+0.3
4,265,528	+		Echvi_3593	0.17	+0.7
4,265,528	+		Echvi_3593	0.17	+0.1
4,265,529	-		Echvi_3593	0.17	-2.0
4,265,529	-		Echvi_3593	0.17	+0.9
4,265,530	+		Echvi_3593	0.17	-1.2
4,265,530	+		Echvi_3593	0.17	-1.9
4,265,530	+		Echvi_3593	0.17	-0.1
4,265,530	+		Echvi_3593	0.17	-0.9
4,265,531	-		Echvi_3593	0.17	+0.1
4,265,577	+		Echvi_3593	0.24	-1.7
4,265,577	+		Echvi_3593	0.24	+2.0
4,265,578	-		Echvi_3593	0.24	-1.3
4,265,635	+		Echvi_3593	0.32	-2.9
4,265,648	-		Echvi_3593	0.34	-3.4
4,265,648	-		Echvi_3593	0.34	-0.6
4,265,648	-		Echvi_3593	0.34	+1.5
4,265,673	+		Echvi_3593	0.38	-0.9
4,265,680	-		Echvi_3593	0.39	+2.0
4,265,703	-		Echvi_3593	0.42	+0.6
4,265,727	-		Echvi_3593	0.46	-0.2
4,265,766	-		Echvi_3593	0.51	-1.0
4,265,792	+		Echvi_3593	0.55	-1.7
4,265,792	+		Echvi_3593	0.55	+1.3
4,265,874	+		Echvi_3593	0.67	+1.4
4,265,893	+		Echvi_3593	0.70	-1.3
4,265,894	-		Echvi_3593	0.70	+1.0
4,265,894	-		Echvi_3593	0.70	-0.4
4,265,894	-		Echvi_3593	0.70	-0.3
4,266,031	-		Echvi_3593	0.90	-0.6
4,266,108	-				+0.1
4,266,149	-		Echvi_3594	0.28	+0.4
4,266,195	+		Echvi_3594	0.57	+1.2
4,266,284	+				-1.5
4,266,284	+				+0.7
4,266,285	-				-0.6
4,266,286	+				+1.4
4,266,286	+				-2.9
4,266,287	-				-1.2
4,266,287	-				-2.5
4,266,287	-				-2.6
4,266,291	+				-2.1
4,266,297	+				+2.0
4,266,307	-		Echvi_3595	0.10	+2.1
4,266,317	+		Echvi_3595	0.13	+0.5
4,266,342	+		Echvi_3595	0.18	+1.0
4,266,407	+		Echvi_3595	0.33	+1.3