Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3580

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,240,564	+				-0.4
4,240,609	+				-1.2
4,240,610	-				+0.5
4,240,610	-				-0.3
4,240,660	-				-1.2
4,240,660	-				+1.9
4,240,688	-				+2.4
4,240,741	+				-1.2
4,240,766	-				-0.1
4,240,775	+				-0.1
4,240,775	+				-2.5
4,240,775	+				+0.2
4,240,775	+				+0.6
4,240,776	-				+0.9
4,240,777	+				-1.6
4,240,778	-				+0.1
4,240,778	-				-0.7
4,240,785	-				+1.2
4,240,785	-				-0.4
4,240,787	+				-1.6
4,240,841	+		Echvi_3579	0.19	-1.3
4,240,842	-		Echvi_3579	0.19	-0.2
4,240,886	-		Echvi_3579	0.29	+1.4
4,240,917	+		Echvi_3579	0.37	-0.0
4,240,917	+		Echvi_3579	0.37	-1.1
4,240,917	+		Echvi_3579	0.37	+0.1
4,240,948	-		Echvi_3579	0.44	+2.4
4,240,953	-		Echvi_3579	0.45	+1.0
4,240,965	-		Echvi_3579	0.48	+0.9
4,240,975	-		Echvi_3579	0.50	+0.1
4,241,003	+		Echvi_3579	0.56	-2.3
4,241,003	+		Echvi_3579	0.56	+0.4
4,241,005	+		Echvi_3579	0.57	+2.4
4,241,005	+		Echvi_3579	0.57	-2.2
4,241,005	+		Echvi_3579	0.57	-0.0
4,241,006	-		Echvi_3579	0.57	+1.8
4,241,099	+		Echvi_3579	0.79	-2.9
4,241,099	+		Echvi_3579	0.79	-1.0
4,241,099	+		Echvi_3579	0.79	-0.1
4,241,100	-		Echvi_3579	0.79	+1.0
4,241,100	-		Echvi_3579	0.79	-2.1
4,241,105	+		Echvi_3579	0.80	+0.8
4,241,105	+		Echvi_3579	0.80	+1.2
4,241,105	+		Echvi_3579	0.80	+0.7
4,241,105	+		Echvi_3579	0.80	+1.0
4,241,106	-		Echvi_3579	0.80	+2.0
4,241,106	-		Echvi_3579	0.80	+1.5
4,241,110	-		Echvi_3579	0.81	-0.7
4,241,110	-		Echvi_3579	0.81	+1.6
4,241,110	-		Echvi_3579	0.81	+0.7
4,241,110	-		Echvi_3579	0.81	-0.6
4,241,110	-		Echvi_3579	0.81	-0.6
4,241,113	+		Echvi_3579	0.82	-1.8
4,241,114	-		Echvi_3579	0.82	-1.1
4,241,114	-		Echvi_3579	0.82	+1.5
4,241,183	+				+0.4
4,241,189	-				+2.2
4,241,237	+				+1.3
4,241,282	+				+2.1
4,241,350	-				-2.8
4,241,460	-		Echvi_3580	0.17	-0.2
4,241,462	+		Echvi_3580	0.17	-1.2
4,241,463	-		Echvi_3580	0.17	-3.5
4,241,463	-		Echvi_3580	0.17	+2.1
4,241,463	-		Echvi_3580	0.17	-2.3
4,241,463	-		Echvi_3580	0.17	-1.3
4,241,463	-		Echvi_3580	0.17	+1.4
4,241,464	+		Echvi_3580	0.17	+1.8
4,241,464	+		Echvi_3580	0.17	-0.3
4,241,465	-		Echvi_3580	0.17	-0.6
4,241,465	-		Echvi_3580	0.17	+0.5
4,241,465	-		Echvi_3580	0.17	-0.8
4,241,498	+		Echvi_3580	0.19	+1.5
4,241,498	+		Echvi_3580	0.19	+2.2
4,241,537	-		Echvi_3580	0.22	+2.4
4,241,539	+		Echvi_3580	0.23	+0.8
4,241,539	+		Echvi_3580	0.23	-1.6
4,241,540	-		Echvi_3580	0.23	-1.8
4,241,558	+		Echvi_3580	0.24	-0.6
4,241,559	-		Echvi_3580	0.24	-0.9
4,241,564	+		Echvi_3580	0.25	-0.0
4,241,565	-		Echvi_3580	0.25	+0.8
4,241,594	+		Echvi_3580	0.27	-0.9
4,241,594	+		Echvi_3580	0.27	-1.5
4,241,597	+		Echvi_3580	0.27	+1.9
4,241,597	+		Echvi_3580	0.27	+2.6
4,241,598	-		Echvi_3580	0.27	+1.0
4,241,622	+		Echvi_3580	0.29	-0.1
4,241,622	+		Echvi_3580	0.29	+2.1
4,241,622	+		Echvi_3580	0.29	+2.3
4,241,705	-		Echvi_3580	0.35	-1.1
4,241,754	+		Echvi_3580	0.39	-1.2
4,241,755	-		Echvi_3580	0.39	-1.6
4,241,755	-		Echvi_3580	0.39	-2.1
4,241,755	-		Echvi_3580	0.39	+0.4
4,241,775	-		Echvi_3580	0.41	+0.6
4,241,775	-		Echvi_3580	0.41	+0.5
4,241,775	-		Echvi_3580	0.41	-0.8
4,241,803	+		Echvi_3580	0.43	-2.1
4,241,805	+		Echvi_3580	0.43	-1.5
4,241,925	+		Echvi_3580	0.52	-0.4
4,241,925	+		Echvi_3580	0.52	-1.5
4,241,926	-		Echvi_3580	0.52	+0.9
4,242,012	-		Echvi_3580	0.59	-0.9
4,242,053	-		Echvi_3580	0.62	-3.6
4,242,149	-		Echvi_3580	0.69	-0.4
4,242,149	-		Echvi_3580	0.69	-0.5
4,242,172	+		Echvi_3580	0.71	-0.4
4,242,175	+		Echvi_3580	0.71	-3.6
4,242,176	-		Echvi_3580	0.71	-2.3
4,242,203	-		Echvi_3580	0.73	+0.1
4,242,228	+		Echvi_3580	0.75	+0.0
4,242,229	-		Echvi_3580	0.75	-1.6
4,242,277	+		Echvi_3580	0.79	-0.1
4,242,318	+		Echvi_3580	0.82	+1.9
4,242,319	-		Echvi_3580	0.82	-0.6
4,242,319	-		Echvi_3580	0.82	+0.6
4,242,371	+		Echvi_3580	0.86	+0.9
4,242,401	+		Echvi_3580	0.89	+1.4
4,242,403	+		Echvi_3580	0.89	+0.4
4,242,403	+		Echvi_3580	0.89	-0.6
4,242,403	+		Echvi_3580	0.89	+2.5
4,242,403	+		Echvi_3580	0.89	+2.1
4,242,404	-		Echvi_3580	0.89	-1.5
4,242,404	-		Echvi_3580	0.89	+0.6
4,242,404	-		Echvi_3580	0.89	-3.2
4,242,404	-		Echvi_3580	0.89	-1.2
4,242,442	+				+0.9
4,242,482	+				-0.0
4,242,505	+				+2.6
4,242,515	+				-1.0
4,242,516	-				-3.5
4,242,516	-				-0.6
4,242,537	-				+2.4
4,242,550	+				-2.6
4,242,550	+				+3.3
4,242,592	+				-2.0
4,242,592	+				-2.1
4,242,593	-				-2.7
4,242,594	+				-0.2
4,242,594	+				+1.8
4,242,595	-				-2.9
4,242,595	-				-1.3
4,242,595	-				-0.7
4,242,603	+				+1.9
4,242,603	+				-0.1
4,242,604	-				-0.6
4,242,614	+				-0.3
4,242,627	+				-1.8
4,242,643	-				-1.5
4,242,655	+				-4.2
4,242,655	+				+0.1
4,242,656	-				-3.5
4,242,656	-				-0.5
4,242,657	+				+0.1
4,242,657	+				-0.1
4,242,658	-				+1.6
4,242,704	-		Echvi_3581	0.14	-0.3
4,242,817	-		Echvi_3581	0.28	-1.2
4,242,887	+		Echvi_3581	0.36	+3.0
4,242,887	+		Echvi_3581	0.36	+3.6
4,242,887	+		Echvi_3581	0.36	-0.0
4,242,887	+		Echvi_3581	0.36	-2.4
4,242,888	-		Echvi_3581	0.37	-1.3
4,242,915	+		Echvi_3581	0.40	-2.5
4,242,916	-		Echvi_3581	0.40	+0.9
4,242,916	-		Echvi_3581	0.40	-0.6
4,242,925	+		Echvi_3581	0.41	-2.0
4,242,934	+		Echvi_3581	0.42	-2.3
4,242,934	+		Echvi_3581	0.42	-1.5
4,242,934	+		Echvi_3581	0.42	-3.4
4,242,985	+		Echvi_3581	0.48	+1.7
4,242,986	-		Echvi_3581	0.49	-2.0
4,242,988	-		Echvi_3581	0.49	+0.4
4,242,990	+		Echvi_3581	0.49	+1.2
4,242,990	+		Echvi_3581	0.49	+0.5
4,242,991	-		Echvi_3581	0.49	-3.3
4,243,004	+		Echvi_3581	0.51	-3.1
4,243,005	-		Echvi_3581	0.51	-1.8
4,243,005	-		Echvi_3581	0.51	-1.6
4,243,005	-		Echvi_3581	0.51	+0.8
4,243,085	-		Echvi_3581	0.61	+0.2
4,243,137	+		Echvi_3581	0.67	-3.2
4,243,254	-		Echvi_3581	0.81	+1.6
4,243,259	+		Echvi_3581	0.82	-1.1
4,243,260	-		Echvi_3581	0.82	+0.3
4,243,322	+		Echvi_3581	0.89	+0.8
4,243,323	-		Echvi_3581	0.90	+0.1
4,243,323	-		Echvi_3581	0.90	-1.2
4,243,326	+				-2.4
4,243,326	+				-0.2
4,243,326	+				+0.3
4,243,326	+				+1.2
4,243,326	+				+1.7
4,243,327	-				-0.2
4,243,327	-				-0.1
4,243,327	-				+0.2
4,243,327	-				-1.6
4,243,327	-				+0.7
4,243,327	-				-1.4
4,243,328	+				+1.1
4,243,328	+				+0.5
4,243,328	+				+0.4
4,243,329	-				-1.8
4,243,329	-				-0.7
4,243,329	-				-2.5
4,243,393	-				-0.4
4,243,472	+				-0.6
4,243,522	+		Echvi_3582	0.13	+2.2
4,243,522	+				+0.9
4,243,522	+		Echvi_3582	0.13	-1.8
4,243,523	-		Echvi_3582	0.13	+1.9
4,243,523	-		Echvi_3582	0.13	+1.3
4,243,523	-		Echvi_3582	0.13	+0.3
4,243,529	-		Echvi_3582	0.13	-0.2