Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3500

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,145,959	-		Echvi_3497	0.80	-0.0
4,146,037	+		Echvi_3497	0.85	-0.8
4,146,084	+		Echvi_3497	0.88	+1.0
4,146,084	+				+4.3
4,146,084	+		Echvi_3497	0.88	-0.2
4,146,085	-		Echvi_3497	0.88	+0.0
4,146,085	-		Echvi_3497	0.88	-1.4
4,146,086	+		Echvi_3497	0.88	+3.2
4,146,086	+		Echvi_3497	0.88	+1.8
4,146,086	+		Echvi_3497	0.88	-0.0
4,146,087	-		Echvi_3497	0.88	-0.3
4,146,124	+				-0.5
4,146,125	-				-0.5
4,146,125	-				-0.2
4,146,125	-				-2.9
4,146,177	-				+0.6
4,146,198	+				+1.0
4,146,198	+				-2.1
4,146,233	+				-1.4
4,146,234	-				-0.2
4,146,234	-				-2.1
4,146,243	+				+1.7
4,146,243	+				+0.9
4,146,256	+				-0.0
4,146,257	-				-1.3
4,146,257	-				+5.9
4,146,257	-				-0.4
4,146,257	-				+0.7
4,146,257	-				+0.6
4,146,274	-				+0.6
4,146,274	-				-0.8
4,146,308	+				+0.4
4,146,309	-				-0.3
4,146,309	-				+1.1
4,146,310	+				+3.7
4,146,310	+				+1.5
4,146,361	-				+0.4
4,146,363	+				-0.8
4,146,363	+				+0.2
4,146,363	+				+2.4
4,146,364	-				+0.7
4,146,364	-				+0.1
4,146,524	+		Echvi_3498	0.66	+0.5
4,146,527	+		Echvi_3498	0.68	+0.2
4,146,536	+		Echvi_3498	0.75	-0.0
4,146,537	-		Echvi_3498	0.76	+0.1
4,146,777	+				-2.7
4,146,778	-				+3.3
4,146,780	+				-2.4
4,146,786	+				+0.9
4,146,877	+				-2.8
4,146,878	-				-0.4
4,146,878	-				+0.4
4,146,878	-				-0.0
4,146,878	-				+0.6
4,146,897	-				-2.6
4,147,041	+				-0.6
4,147,082	+				-1.0
4,147,083	-				-1.7
4,147,103	-		Echvi_3500	0.10	+1.9
4,147,128	+		Echvi_3500	0.11	+0.0
4,147,128	+		Echvi_3500	0.11	+3.6
4,147,128	+		Echvi_3500	0.11	+1.1
4,147,184	+		Echvi_3500	0.13	-0.0
4,147,185	-		Echvi_3500	0.13	+1.4
4,147,185	-		Echvi_3500	0.13	-1.2
4,147,194	-		Echvi_3500	0.13	-0.0
4,147,194	-		Echvi_3500	0.13	+1.0
4,147,338	+		Echvi_3500	0.18	+1.2
4,147,339	-		Echvi_3500	0.18	+0.8
4,147,558	-		Echvi_3500	0.25	+1.8
4,147,616	-		Echvi_3500	0.26	+1.4
4,147,624	+		Echvi_3500	0.27	+0.1
4,147,624	+		Echvi_3500	0.27	+0.8
4,147,624	+		Echvi_3500	0.27	+2.6
4,147,624	+		Echvi_3500	0.27	+1.6
4,147,624	+		Echvi_3500	0.27	+0.2
4,147,625	-		Echvi_3500	0.27	+0.6
4,147,625	-		Echvi_3500	0.27	-0.7
4,147,625	-		Echvi_3500	0.27	-0.6
4,147,625	-		Echvi_3500	0.27	+1.3
4,147,645	+		Echvi_3500	0.27	-0.0
4,147,648	-		Echvi_3500	0.27	+1.8
4,147,648	-		Echvi_3500	0.27	+0.7
4,147,711	-		Echvi_3500	0.29	-1.4
4,147,735	-		Echvi_3500	0.30	-0.8
4,147,810	+		Echvi_3500	0.33	-2.7
4,147,811	-		Echvi_3500	0.33	-2.7
4,147,811	-		Echvi_3500	0.33	+1.4
4,147,840	-		Echvi_3500	0.34	+0.8
4,147,895	+		Echvi_3500	0.35	-0.8
4,147,895	+		Echvi_3500	0.35	-2.0
4,147,895	+		Echvi_3500	0.35	-2.3
4,147,896	-		Echvi_3500	0.35	+1.0
4,147,898	-		Echvi_3500	0.35	-1.7
4,147,898	-		Echvi_3500	0.35	+1.0
4,147,915	+		Echvi_3500	0.36	-1.1
4,147,915	+		Echvi_3500	0.36	-3.0
4,147,915	+		Echvi_3500	0.36	+0.8
4,147,916	-		Echvi_3500	0.36	-1.8
4,147,951	+		Echvi_3500	0.37	-0.8
4,147,960	+		Echvi_3500	0.37	-2.5
4,147,986	+		Echvi_3500	0.38	+0.7
4,148,017	-		Echvi_3500	0.39	+1.5
4,148,023	+		Echvi_3500	0.39	+0.0
4,148,024	-		Echvi_3500	0.39	+0.4
4,148,024	-		Echvi_3500	0.39	+0.4
4,148,056	-		Echvi_3500	0.40	+0.5
4,148,212	+		Echvi_3500	0.45	-0.3
4,148,212	+		Echvi_3500	0.45	-0.4
4,148,247	-		Echvi_3500	0.47	+0.3
4,148,256	-		Echvi_3500	0.47	+0.1
4,148,256	-		Echvi_3500	0.47	+3.0
4,148,295	+		Echvi_3500	0.48	-2.4
4,148,400	+		Echvi_3500	0.51	-3.1
4,148,414	-		Echvi_3500	0.52	+0.4
4,148,414	-		Echvi_3500	0.52	+1.4
4,148,416	-		Echvi_3500	0.52	+1.9
4,148,430	+		Echvi_3500	0.52	+2.0
4,148,449	-		Echvi_3500	0.53	+1.3
4,148,491	+		Echvi_3500	0.54	+1.1
4,148,492	-		Echvi_3500	0.54	-3.2
4,148,606	-		Echvi_3500	0.58	-0.2
4,148,606	-		Echvi_3500	0.58	-1.5
4,148,606	-		Echvi_3500	0.58	+1.5
4,148,624	-		Echvi_3500	0.59	+1.8
4,148,631	+		Echvi_3500	0.59	-1.7
4,148,637	+		Echvi_3500	0.59	+1.4
4,148,641	+		Echvi_3500	0.59	+1.2
4,148,641	+		Echvi_3500	0.59	-2.5
4,148,641	+		Echvi_3500	0.59	+2.5
4,148,641	+		Echvi_3500	0.59	-1.2
4,148,641	+		Echvi_3500	0.59	-2.7
4,148,642	-		Echvi_3500	0.59	+2.4
4,148,642	-		Echvi_3500	0.59	+1.5
4,148,642	-		Echvi_3500	0.59	-0.7
4,148,698	-		Echvi_3500	0.61	+0.1
4,148,775	-		Echvi_3500	0.63	+0.7
4,148,784	-		Echvi_3500	0.64	+2.0
4,148,840	+		Echvi_3500	0.65	-0.8
4,148,840	+		Echvi_3500	0.65	+0.5
4,148,911	+		Echvi_3500	0.68	+1.6
4,148,912	-		Echvi_3500	0.68	+1.4
4,149,023	-		Echvi_3500	0.71	-0.6
4,149,023	-		Echvi_3500	0.71	-1.4
4,149,023	-		Echvi_3500	0.71	-1.0
4,149,023	-		Echvi_3500	0.71	+0.0
4,149,023	-		Echvi_3500	0.71	-3.5
4,149,205	-		Echvi_3500	0.77	+1.0
4,149,207	+		Echvi_3500	0.77	-3.8
4,149,207	+		Echvi_3500	0.77	-3.8
4,149,208	-		Echvi_3500	0.77	-0.2
4,149,268	+		Echvi_3500	0.79	-0.6
4,149,268	+		Echvi_3500	0.79	+0.2
4,149,269	-		Echvi_3500	0.79	+0.6
4,149,305	-		Echvi_3500	0.80	+0.4
4,149,305	-		Echvi_3500	0.80	-2.2
4,149,305	-		Echvi_3500	0.80	+1.2
4,149,305	-		Echvi_3500	0.80	-2.6
4,149,305	-		Echvi_3500	0.80	-0.4
4,149,305	-		Echvi_3500	0.80	-0.8
4,149,305	-		Echvi_3500	0.80	+0.9
4,149,310	+		Echvi_3500	0.80	+1.6
4,149,324	+		Echvi_3500	0.81	+0.7
4,149,325	-		Echvi_3500	0.81	+0.4
4,149,438	-		Echvi_3500	0.84	+0.8
4,149,438	-		Echvi_3500	0.84	+3.7
4,149,450	+		Echvi_3500	0.85	-3.6
4,149,558	+		Echvi_3500	0.88	-1.1
4,149,559	-		Echvi_3500	0.88	-1.8
4,149,560	+		Echvi_3500	0.88	-0.3
4,149,560	+		Echvi_3500	0.88	-0.9
4,149,561	-		Echvi_3500	0.88	-1.2
4,149,561	-		Echvi_3500	0.88	+1.5
4,149,604	-		Echvi_3500	0.90	-2.5
4,149,620	-				+2.6
4,149,634	-				-0.4
4,149,666	+				-1.8
4,149,690	+				-1.4
4,149,691	-				-1.0
4,149,691	-				-3.2
4,149,695	-				-0.9
4,149,704	+				-1.5
4,149,705	-				+1.5
4,149,705	-				-0.4
4,149,817	-				-0.4
4,149,829	+				-2.6
4,149,880	+				-0.0
4,149,881	-				+1.0
4,149,882	+				-3.2
4,149,882	+				-1.9
4,149,882	+				-0.8
4,149,883	-				+1.3
4,149,883	-				+0.4
4,149,897	+				+0.4
4,149,948	+				-2.3
4,149,949	-				+0.0
4,149,953	+				+1.7
4,149,953	+				+1.7
4,149,953	+				+0.8
4,149,954	-				-0.4
4,149,954	-				+0.6
4,149,956	+				+2.3
4,149,962	+				+1.3
4,149,962	+				-2.1
4,149,962	+				+1.3
4,149,962	+				-0.6
4,149,962	+				+0.4
4,149,962	+				+2.2
4,149,962	+				+0.1
4,149,962	+				+0.1
4,149,963	-				-1.0
4,149,963	-				-2.9
4,149,963	-				+0.8
4,150,027	+				-2.9
4,150,028	-				-1.5
4,150,046	+				-0.5
4,150,047	-				-0.8
4,150,060	-				-1.8
4,150,096	-				+2.8
4,150,096	-				-0.1
4,150,127	+		Echvi_3501	0.12	+2.2
4,150,128	-		Echvi_3501	0.12	-2.2
4,150,169	+		Echvi_3501	0.15	-0.5
4,150,195	+		Echvi_3501	0.16	+1.9
4,150,196	-		Echvi_3501	0.16	-1.2
4,150,235	-		Echvi_3501	0.19	-1.9
4,150,235	-		Echvi_3501	0.19	-1.2
4,150,247	-		Echvi_3501	0.19	-0.4
4,150,250	-		Echvi_3501	0.20	-0.8
4,150,250	-		Echvi_3501	0.20	+2.0
4,150,308	-		Echvi_3501	0.23	+1.0
4,150,328	+		Echvi_3501	0.24	+0.3
4,150,418	+		Echvi_3501	0.30	+2.0
4,150,419	-		Echvi_3501	0.30	+0.4
4,150,419	-		Echvi_3501	0.30	+1.6
4,150,419	-		Echvi_3501	0.30	+0.6
4,150,440	+		Echvi_3501	0.31	+1.6
4,150,594	-		Echvi_3501	0.41	+1.8
4,150,594	-		Echvi_3501	0.41	+1.2
4,150,594	-		Echvi_3501	0.41	-0.8
4,150,723	-		Echvi_3501	0.49	+0.2
4,150,738	+		Echvi_3501	0.50	-0.0
4,150,808	+		Echvi_3501	0.54	+0.9
4,150,808	+		Echvi_3501	0.54	+0.9
4,150,808	+		Echvi_3501	0.54	-1.0
4,150,808	+		Echvi_3501	0.54	-2.2
4,150,809	-		Echvi_3501	0.55	-1.2
4,150,809	-		Echvi_3501	0.55	+1.8
4,150,809	-		Echvi_3501	0.55	+1.2
4,150,809	-		Echvi_3501	0.55	-2.1
4,150,809	-		Echvi_3501	0.55	-3.2
4,150,809	-		Echvi_3501	0.55	-2.8
4,150,863	+		Echvi_3501	0.58	-1.5
4,150,863	+		Echvi_3501	0.58	+0.7
4,150,863	+		Echvi_3501	0.58	-1.7
4,150,864	-		Echvi_3501	0.58	-0.0
4,150,864	-		Echvi_3501	0.58	-1.2
4,150,864	-		Echvi_3501	0.58	+0.3