Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2949 and Echvi_2950 are separated by 4 nucleotides Echvi_2950 and Echvi_2951 are separated by 434 nucleotides Echvi_2951 and Echvi_2952 are separated by 31 nucleotides
Echvi_2949: Echvi_2949 - NADPH:quinone reductase and related Zn-dependent oxidoreductases, at 3,526,841 to 3,527,839
_2949
Echvi_2950: Echvi_2950 - hypothetical protein, at 3,527,844 to 3,528,179
_2950
Echvi_2951: Echvi_2951 - Electron transfer flavoprotein, beta subunit, at 3,528,614 to 3,529,351
_2951
Echvi_2952: Echvi_2952 - Electron transfer flavoprotein, alpha subunit, at 3,529,383 to 3,530,348
_2952
Position (kb)
3528
3529
3530 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3527.835 kb on + strand at 3527.837 kb on + strand at 3527.950 kb on + strand, within Echvi_2950 at 3527.951 kb on - strand, within Echvi_2950 at 3528.011 kb on - strand, within Echvi_2950 at 3528.011 kb on - strand, within Echvi_2950 at 3528.011 kb on - strand, within Echvi_2950 at 3528.011 kb on - strand, within Echvi_2950 at 3528.014 kb on + strand, within Echvi_2950 at 3528.015 kb on - strand, within Echvi_2950 at 3528.022 kb on + strand, within Echvi_2950 at 3528.072 kb on + strand, within Echvi_2950 at 3528.072 kb on + strand, within Echvi_2950 at 3528.073 kb on - strand, within Echvi_2950 at 3528.073 kb on - strand, within Echvi_2950 at 3528.073 kb on - strand, within Echvi_2950 at 3528.081 kb on - strand, within Echvi_2950 at 3528.197 kb on - strand at 3528.224 kb on + strand at 3528.224 kb on + strand at 3528.224 kb on + strand at 3528.225 kb on - strand at 3528.225 kb on - strand at 3528.227 kb on - strand at 3528.227 kb on - strand at 3528.232 kb on - strand at 3528.244 kb on - strand at 3528.299 kb on - strand at 3528.309 kb on - strand at 3528.321 kb on - strand at 3528.348 kb on + strand at 3528.421 kb on + strand at 3528.421 kb on + strand at 3528.493 kb on + strand at 3528.544 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 3,527,835 + +2.0 3,527,837 + -0.3 3,527,950 + Echvi_2950 0.32 -0.8 3,527,951 - Echvi_2950 0.32 -0.4 3,528,011 - Echvi_2950 0.50 -0.2 3,528,011 - Echvi_2950 0.50 +1.5 3,528,011 - Echvi_2950 0.50 +1.4 3,528,011 - Echvi_2950 0.50 +1.2 3,528,014 + Echvi_2950 0.51 +0.9 3,528,015 - Echvi_2950 0.51 -2.3 3,528,022 + Echvi_2950 0.53 +2.0 3,528,072 + Echvi_2950 0.68 +1.4 3,528,072 + Echvi_2950 0.68 +0.8 3,528,073 - Echvi_2950 0.68 -1.1 3,528,073 - Echvi_2950 0.68 +3.2 3,528,073 - Echvi_2950 0.68 -0.3 3,528,081 - Echvi_2950 0.71 -2.3 3,528,197 - +0.0 3,528,224 + +0.4 3,528,224 + +0.1 3,528,224 + -0.6 3,528,225 - +2.2 3,528,225 - +0.9 3,528,227 - +0.5 3,528,227 - -1.7 3,528,232 - +2.0 3,528,244 - -1.6 3,528,299 - +0.4 3,528,309 - +0.3 3,528,321 - +2.2 3,528,348 + +2.0 3,528,421 + +1.3 3,528,421 + +0.6 3,528,493 + -1.8 3,528,544 - +1.9
Or see this region's nucleotide sequence