Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2612

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,093,693	-		Echvi_2611	0.66	+2.7
3,093,693	-		Echvi_2611	0.66	+0.3
3,093,719	+		Echvi_2611	0.69	-0.9
3,093,720	-		Echvi_2611	0.69	+1.6
3,093,760	+		Echvi_2611	0.74	-0.2
3,093,761	-		Echvi_2611	0.74	-0.0
3,093,825	-		Echvi_2611	0.81	-1.7
3,093,862	-		Echvi_2611	0.85	+1.2
3,093,880	+		Echvi_2611	0.87	-1.0
3,093,893	+		Echvi_2611	0.88	-0.8
3,093,893	+		Echvi_2611	0.88	-0.6
3,093,893	+		Echvi_2611	0.88	-0.2
3,093,898	+		Echvi_2611	0.89	-2.3
3,093,899	-		Echvi_2611	0.89	+0.9
3,093,983	-				-1.5
3,094,015	+				+1.7
3,094,015	+				+1.0
3,094,015	+				+2.1
3,094,015	+				+0.2
3,094,015	+				+1.8
3,094,015	+				+0.8
3,094,016	-				+0.7
3,094,016	-				-0.2
3,094,016	-				+1.0
3,094,016	-				-2.5
3,094,016	-				-4.8
3,094,016	-				+0.0
3,094,016	-				+1.9
3,094,016	-				-1.2
3,094,016	-				+1.2
3,094,016	-				+0.3
3,094,017	+				-2.6
3,094,017	+				+3.4
3,094,017	+				+0.6
3,094,018	-				+1.4
3,094,029	+				-1.4
3,094,048	+				-0.2
3,094,137	+				-0.4
3,094,152	+				-0.0
3,094,199	-				+2.4
3,094,216	-				+0.2
3,094,216	-				-0.4
3,094,270	+				-1.8
3,094,275	-				-1.4
3,094,281	-				-0.4
3,094,283	+				+1.4
3,094,284	-				+2.7
3,094,285	+				-0.6
3,094,321	+				+0.6
3,094,321	+				+0.8
3,094,321	+				+1.6
3,094,352	-				-1.6
3,094,448	+				-1.0
3,094,448	+				-0.0
3,094,449	-				+1.8
3,094,449	-				-2.3
3,094,449	-				+0.4
3,094,449	-				-2.3
3,094,449	-				+0.4
3,094,449	-				-1.4
3,094,449	-				+1.4
3,094,449	-				-3.0
3,094,452	-				-1.7
3,094,488	-				-1.2
3,094,488	-				-1.7
3,094,489	+				+0.4
3,094,493	-				+1.3
3,094,493	-				-0.3
3,094,493	-				-0.2
3,094,504	+				+0.2
3,094,505	-				+2.6
3,094,514	+				+1.4
3,094,515	-				+0.8
3,094,532	+				+0.6
3,094,533	-				+1.2
3,094,598	+				+0.8
3,094,627	+				-1.3
3,094,721	-		Echvi_2612	0.15	-1.8
3,094,730	-		Echvi_2612	0.15	-1.6
3,094,940	-		Echvi_2612	0.29	+0.1
3,095,045	+		Echvi_2612	0.35	-0.6
3,095,046	-		Echvi_2612	0.36	-0.4
3,095,197	+		Echvi_2612	0.45	-1.8
3,095,359	+		Echvi_2612	0.56	-1.0
3,095,384	+		Echvi_2612	0.57	+0.6
3,095,434	+		Echvi_2612	0.60	-1.7
3,095,490	-		Echvi_2612	0.64	-1.2
3,095,552	-		Echvi_2612	0.68	-0.5
3,095,651	+		Echvi_2612	0.74	+2.6
3,095,737	+		Echvi_2612	0.80	-0.6
3,095,738	-		Echvi_2612	0.80	+0.9
3,095,809	+		Echvi_2612	0.84	+1.5
3,095,855	+		Echvi_2612	0.87	-0.6
3,095,856	-		Echvi_2612	0.87	-0.2
3,095,856	-		Echvi_2612	0.87	-0.8
3,095,856	-		Echvi_2612	0.87	-2.3
3,095,859	-		Echvi_2612	0.88	+1.0
3,095,954	-				-0.6
3,095,954	-				+2.2
3,095,993	+				-0.1
3,095,993	+				-0.7
3,095,993	+				-1.2
3,095,994	-				-3.1
3,095,996	+				-2.1
3,095,997	-				+1.5
3,096,002	-				-1.4
3,096,008	+				+1.5
3,096,008	+				-1.6
3,096,009	-				+0.9
3,096,061	-				+2.1
3,096,150	+				-1.2
3,096,151	-				+0.9
3,096,171	-				-0.8
3,096,171	-				+1.1
3,096,171	-				+3.4
3,096,177	-				+0.4
3,096,216	+				-2.2
3,096,359	+				-1.3
3,096,392	-				-1.9
3,096,410	+				-0.9
3,096,410	+				-1.2
3,096,454	+				-0.4
3,096,454	+				-0.2
3,096,455	-				-0.8
3,096,457	+				+0.4
3,096,491	+				-1.9
3,096,632	-		Echvi_2613	0.16	+0.8
3,096,744	+		Echvi_2613	0.25	-1.3
3,096,745	-		Echvi_2613	0.25	-1.9
3,096,945	+		Echvi_2613	0.40	+0.4
3,096,945	+		Echvi_2613	0.40	-1.2
3,096,946	-		Echvi_2613	0.40	-0.2
3,096,946	-		Echvi_2613	0.40	-1.4
3,096,946	-		Echvi_2613	0.40	-2.0
3,096,946	-		Echvi_2613	0.40	+0.5
3,097,047	+		Echvi_2613	0.48	+1.8