Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2532

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,007,917	-				+0.4
3,007,927	-				+0.4
3,008,024	+				+0.8
3,008,024	+				-0.2
3,008,189	+		Echvi_2532	0.25	-1.7
3,008,190	-		Echvi_2532	0.25	-0.4
3,008,227	-		Echvi_2532	0.32	-0.7
3,008,247	-		Echvi_2532	0.35	-0.8
3,008,259	+		Echvi_2532	0.37	+0.6
3,008,259	+		Echvi_2532	0.37	+0.0
3,008,259	+		Echvi_2532	0.37	+0.3
3,008,260	-		Echvi_2532	0.37	-1.1
3,008,262	-		Echvi_2532	0.38	+2.2
3,008,262	-		Echvi_2532	0.38	-1.7
3,008,279	-		Echvi_2532	0.40	+0.2
3,008,279	-		Echvi_2532	0.40	-0.4
3,008,287	+		Echvi_2532	0.42	+2.2
3,008,305	+		Echvi_2532	0.45	-0.6
3,008,306	-		Echvi_2532	0.45	-2.0
3,008,309	+		Echvi_2532	0.46	-0.8
3,008,327	-		Echvi_2532	0.49	-2.6
3,008,361	+		Echvi_2532	0.54	+1.2
3,008,444	+		Echvi_2532	0.68	+1.0
3,008,444	+		Echvi_2532	0.68	-1.6
3,008,445	-		Echvi_2532	0.69	+3.9
3,008,445	-		Echvi_2532	0.69	-0.8
3,008,462	+		Echvi_2532	0.71	-2.5
3,008,462	+		Echvi_2532	0.71	-0.3
3,008,462	+		Echvi_2532	0.71	-1.9
3,008,463	-		Echvi_2532	0.72	-1.6
3,008,477	+		Echvi_2532	0.74	+1.3
3,008,478	-		Echvi_2532	0.74	+2.8
3,008,478	-		Echvi_2532	0.74	+1.1
3,008,478	-		Echvi_2532	0.74	+2.8
3,008,489	+		Echvi_2532	0.76	-1.7
3,008,499	+		Echvi_2532	0.78	+0.4
3,008,499	+		Echvi_2532	0.78	+0.2
3,008,499	+		Echvi_2532	0.78	+1.7
3,008,500	-		Echvi_2532	0.78	-0.4
3,008,501	+		Echvi_2532	0.78	-0.7
3,008,502	-		Echvi_2532	0.78	+0.8
3,008,562	-				+0.2
3,008,597	-				+2.2
3,008,676	+				+0.7
3,008,686	+				-2.2
3,008,710	+				-2.2
3,008,711	-		Echvi_2533	0.10	+0.1
3,008,711	-		Echvi_2533	0.10	-2.0
3,008,711	-		Echvi_2533	0.10	+0.3
3,008,741	+		Echvi_2533	0.14	+1.1
3,008,741	+		Echvi_2533	0.14	+0.9
3,008,742	-		Echvi_2533	0.14	-0.2
3,008,742	-		Echvi_2533	0.14	-0.8
3,008,742	-		Echvi_2533	0.14	-1.0
3,008,742	-		Echvi_2533	0.14	-1.1
3,008,742	-		Echvi_2533	0.14	+2.5
3,008,743	+				+2.2
3,008,743	+		Echvi_2533	0.14	-3.4
3,008,744	-		Echvi_2533	0.15	+1.2
3,008,744	-		Echvi_2533	0.15	+2.2
3,008,744	-		Echvi_2533	0.15	-0.6
3,008,747	+		Echvi_2533	0.15	+0.7
3,008,780	-		Echvi_2533	0.20	+2.6
3,008,786	+		Echvi_2533	0.20	-1.2
3,008,787	-		Echvi_2533	0.21	+0.9
3,008,787	-		Echvi_2533	0.21	-0.4
3,008,787	-		Echvi_2533	0.21	+1.0
3,008,921	+		Echvi_2533	0.39	-2.5
3,008,926	+		Echvi_2533	0.40	-0.1
3,008,945	+		Echvi_2533	0.42	+0.1
3,008,946	-		Echvi_2533	0.43	-2.2
3,008,971	+		Echvi_2533	0.46	-2.4
3,008,971	+		Echvi_2533	0.46	+1.0
3,008,972	-		Echvi_2533	0.46	-1.5
3,008,972	-		Echvi_2533	0.46	-1.0
3,009,005	-		Echvi_2533	0.51	+0.9
3,009,036	+		Echvi_2533	0.55	-2.5
3,009,037	-		Echvi_2533	0.55	+1.8
3,009,076	-		Echvi_2533	0.61	+1.5
3,009,143	+		Echvi_2533	0.70	+0.6
3,009,144	-		Echvi_2533	0.70	+3.4
3,009,148	-		Echvi_2533	0.71	+2.6
3,009,159	-		Echvi_2533	0.72	+1.0
3,009,238	+		Echvi_2533	0.83	+2.8
3,009,238	+		Echvi_2533	0.83	+0.1
3,009,239	-		Echvi_2533	0.83	+0.8
3,009,242	+		Echvi_2533	0.84	+3.5
3,009,242	+		Echvi_2533	0.84	+3.2
3,009,243	-		Echvi_2533	0.84	-1.3
3,009,257	-		Echvi_2533	0.86	-1.6
3,009,281	+		Echvi_2533	0.89	-1.3
3,009,284	+		Echvi_2533	0.90	-0.6
3,009,284	+		Echvi_2533	0.90	+0.4
3,009,285	-		Echvi_2533	0.90	+0.9
3,009,285	-		Echvi_2533	0.90	+0.9
3,009,442	+				-1.1
3,009,447	+				+1.0
3,009,516	+				-1.0
3,009,538	+				-1.5
3,009,538	+				+0.6
3,009,539	-				+0.9
3,009,539	-				-0.1
3,009,540	+				-3.0
3,009,559	-				-2.4
3,009,559	-				-2.2
3,009,569	-				+1.0
3,009,579	-				+1.6
3,009,585	+				+0.6
3,009,586	-				+1.3
3,009,590	+				+5.5