Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2348

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,784,557	-		Echvi_2346	0.48	+1.6
2,784,715	+		Echvi_2346	0.85	+0.6
2,784,845	+				+2.2
2,784,846	-				-2.7
2,784,943	+				+2.6
2,784,952	-				-0.8
2,784,981	-				-1.3
2,784,982	+				-0.9
2,784,983	-				-1.2
2,785,025	-		Echvi_2347	0.14	-1.5
2,785,073	-		Echvi_2347	0.22	-1.5
2,785,073	-		Echvi_2347	0.22	+2.8
2,785,079	-		Echvi_2347	0.23	+1.3
2,785,090	+		Echvi_2347	0.24	+0.6
2,785,097	+		Echvi_2347	0.26	+0.2
2,785,098	-		Echvi_2347	0.26	-0.6
2,785,098	-		Echvi_2347	0.26	-0.1
2,785,100	+		Echvi_2347	0.26	+0.4
2,785,101	-		Echvi_2347	0.26	-1.9
2,785,102	+		Echvi_2347	0.26	+0.2
2,785,102	+		Echvi_2347	0.26	+1.4
2,785,102	+		Echvi_2347	0.26	-0.8
2,785,117	+		Echvi_2347	0.29	-0.9
2,785,118	-		Echvi_2347	0.29	-0.1
2,785,160	+		Echvi_2347	0.36	+1.6
2,785,161	-		Echvi_2347	0.36	-2.9
2,785,223	-		Echvi_2347	0.45	+2.2
2,785,238	+		Echvi_2347	0.48	+0.2
2,785,238	+		Echvi_2347	0.48	-0.5
2,785,238	+		Echvi_2347	0.48	-2.5
2,785,239	-		Echvi_2347	0.48	-1.0
2,785,319	+		Echvi_2347	0.61	-1.2
2,785,348	+		Echvi_2347	0.65	-0.8
2,785,349	-		Echvi_2347	0.65	-2.1
2,785,349	-		Echvi_2347	0.65	-0.2
2,785,414	+		Echvi_2347	0.76	-1.5
2,785,414	+		Echvi_2347	0.76	+1.8
2,785,415	-		Echvi_2347	0.76	-1.7
2,785,415	-		Echvi_2347	0.76	+2.7
2,785,415	-		Echvi_2347	0.76	-1.9
2,785,419	+		Echvi_2347	0.76	-0.6
2,785,465	+		Echvi_2347	0.84	-0.1
2,785,465	+		Echvi_2347	0.84	+0.2
2,785,465	+		Echvi_2347	0.84	+0.4
2,785,466	-		Echvi_2347	0.84	-0.1
2,785,475	+		Echvi_2347	0.85	-0.8
2,785,478	+		Echvi_2347	0.86	-1.4
2,785,478	+		Echvi_2347	0.86	-2.7
2,785,478	+		Echvi_2347	0.86	-1.1
2,785,478	+		Echvi_2347	0.86	-2.1
2,785,512	+				-2.3
2,785,524	-				+0.4
2,785,572	-				+4.0
2,785,577	+				+0.6
2,785,578	-				-0.6
2,785,627	-		Echvi_2348	0.19	-2.7
2,785,656	+		Echvi_2348	0.25	+1.8
2,785,678	-		Echvi_2348	0.31	-0.1
2,785,678	-		Echvi_2348	0.31	+1.4
2,785,772	-		Echvi_2348	0.53	+0.6
2,785,772	-		Echvi_2348	0.53	+0.2
2,785,799	-		Echvi_2348	0.59	+2.4
2,785,799	-		Echvi_2348	0.59	+1.4
2,785,829	+		Echvi_2348	0.66	+0.6
2,785,830	-		Echvi_2348	0.66	-0.4
2,785,830	-		Echvi_2348	0.66	+2.8
2,785,840	+		Echvi_2348	0.69	+1.2
2,785,841	-		Echvi_2348	0.69	+0.6
2,785,856	+		Echvi_2348	0.72	-0.1
2,785,927	-		Echvi_2348	0.89	-0.9
2,785,927	-		Echvi_2348	0.89	-1.2
2,785,955	+				+0.5
2,785,956	-				+1.1
2,785,956	-				+0.7
2,785,959	+				+1.6
2,785,984	+				-2.6
2,785,984	+				+2.8
2,785,993	-				+0.3
2,786,075	+				+1.1
2,786,082	+				+0.6
2,786,082	+				-1.5
2,786,082	+				+0.3
2,786,171	-				-0.5
2,786,171	-				-1.5
2,786,171	-				-1.7
2,786,171	-				-0.3
2,786,171	-				+1.2
2,786,173	+				-0.1
2,786,183	+				+1.3
2,786,184	-				-1.9
2,786,227	-				+1.6
2,786,245	+				-2.2
2,786,250	-				+1.3
2,786,307	+				-2.1
2,786,308	-				-1.2
2,786,313	+				+0.2
2,786,313	+				+0.8
2,786,314	-				-0.1
2,786,314	-				-0.1
2,786,314	-				-0.9
2,786,314	-				-1.0
2,786,315	+				-4.1
2,786,315	+				+2.4
2,786,316	-				+0.2
2,786,316	-				-3.1
2,786,316	-				-0.1
2,786,341	-				-0.2
2,786,370	+				-0.5
2,786,370	+				-0.4
2,786,371	-				+2.5
2,786,372	+				+1.1
2,786,434	-				+2.7
2,786,442	-				+0.6
2,786,445	+				-0.5
2,786,499	-				+0.4