Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1988

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,341,769	-				-3.7
2,341,850	+				-0.4
2,341,861	+				-1.8
2,341,861	+				+0.5
2,341,862	-				+1.2
2,341,864	+				-0.3
2,341,865	-				-1.5
2,341,873	-				+0.7
2,341,893	+				+1.8
2,341,895	+				-0.9
2,342,006	+				-0.7
2,342,007	-				+0.8
2,342,007	-				+1.4
2,342,019	+				-1.6
2,342,020	-				+0.4
2,342,020	-				-1.3
2,342,108	+				-1.8
2,342,237	+		Echvi_1987	0.23	-1.0
2,342,403	-		Echvi_1987	0.50	+1.4
2,342,469	+		Echvi_1987	0.60	-0.4
2,342,470	-		Echvi_1987	0.60	-2.0
2,342,470	-		Echvi_1987	0.60	-2.7
2,342,501	-		Echvi_1987	0.65	-3.1
2,342,526	+		Echvi_1987	0.69	-3.3
2,342,526	+		Echvi_1987	0.69	-1.5
2,342,527	-		Echvi_1987	0.70	-2.8
2,342,537	-		Echvi_1987	0.71	+1.1
2,342,636	-		Echvi_1987	0.87	-1.9
2,342,747	+				-1.7
2,342,747	+				-3.1
2,342,747	+				-0.5
2,342,748	-				+2.1
2,342,748	-				-2.2
2,342,749	+				-1.5
2,342,750	-				-1.6
2,342,777	-		Echvi_1988	0.16	-0.8
2,342,777	-		Echvi_1988	0.16	-2.6
2,342,777	-		Echvi_1988	0.16	-2.3
2,342,827	-		Echvi_1988	0.33	+2.9
2,342,889	-		Echvi_1988	0.54	+0.9
2,342,926	+		Echvi_1988	0.67	+1.4
2,342,926	+		Echvi_1988	0.67	-2.6
2,342,981	+		Echvi_1988	0.86	-0.4
2,342,993	+				+0.1
2,342,994	-				-2.9
2,342,998	+				-1.9
2,342,998	+				-0.7
2,343,006	-				-2.4
2,343,036	+				-2.8
2,343,040	+				-3.0
2,343,041	-				+0.9
2,343,041	-				+0.9
2,343,066	+				-3.3
2,343,068	+				-3.7
2,343,068	+				+0.1
2,343,068	+				-1.3
2,343,068	+				+0.9
2,343,068	+				-0.3
2,343,068	+				+0.6
2,343,068	+				-2.2
2,343,069	-				+0.8
2,343,069	-				-1.1
2,343,069	-				-1.7
2,343,069	-				+1.1
2,343,069	-				+0.7
2,343,071	+				-1.2
2,343,071	+				+0.5
2,343,071	+				-0.2
2,343,071	+				-2.7
2,343,071	+				+2.4
2,343,071	+				+1.1
2,343,071	+				-1.1
2,343,072	-				-1.8
2,343,072	-				-2.6
2,343,073	+				-1.1
2,343,073	+				-0.9
2,343,074	-				-1.1
2,343,077	-				-0.7
2,343,103	+				+1.6
2,343,103	+				-0.1
2,343,105	+				-2.1
2,343,105	+				-3.0
2,343,134	-				-0.3
2,343,140	+				+1.4
2,343,273	+		Echvi_1989	0.13	+0.4
2,343,274	-		Echvi_1989	0.13	-0.2
2,343,274	-		Echvi_1989	0.13	+0.1
2,343,316	+		Echvi_1989	0.16	-1.6
2,343,316	+		Echvi_1989	0.16	+2.4
2,343,316	+		Echvi_1989	0.16	-0.4
2,343,316	+		Echvi_1989	0.16	-2.2
2,343,316	+		Echvi_1989	0.16	+0.1
2,343,316	+		Echvi_1989	0.16	-0.3
2,343,317	-		Echvi_1989	0.16	-1.8
2,343,317	-		Echvi_1989	0.16	+0.3
2,343,317	-		Echvi_1989	0.16	-0.7
2,343,317	-		Echvi_1989	0.16	+1.7
2,343,317	-		Echvi_1989	0.16	-1.3
2,343,317	-		Echvi_1989	0.16	-0.1
2,343,368	-		Echvi_1989	0.20	-0.2
2,343,386	+		Echvi_1989	0.21	-0.1
2,343,387	-		Echvi_1989	0.21	-1.3
2,343,392	+		Echvi_1989	0.21	-0.5
2,343,393	-		Echvi_1989	0.21	-2.1
2,343,423	-		Echvi_1989	0.24	-2.0
2,343,425	-		Echvi_1989	0.24	+0.1
2,343,578	+		Echvi_1989	0.34	+0.8
2,343,579	-		Echvi_1989	0.34	+1.3
2,343,579	-		Echvi_1989	0.34	-1.7
2,343,580	+		Echvi_1989	0.34	+1.4
2,343,637	+		Echvi_1989	0.38	-1.3
2,343,638	-		Echvi_1989	0.38	-2.0
2,343,662	-		Echvi_1989	0.40	-2.7
2,343,666	-		Echvi_1989	0.40	+1.4
2,343,721	-		Echvi_1989	0.44	+1.6
2,343,781	+		Echvi_1989	0.48	+1.5
2,343,781	+		Echvi_1989	0.48	+0.4
2,343,809	-		Echvi_1989	0.50	-0.1
2,343,809	-		Echvi_1989	0.50	-0.7
2,343,813	+		Echvi_1989	0.50	-2.1
2,343,814	-		Echvi_1989	0.50	+1.4
2,343,838	+		Echvi_1989	0.52	-0.9
2,343,839	-		Echvi_1989	0.52	-1.7
2,343,869	-		Echvi_1989	0.54	+1.8
2,343,889	+		Echvi_1989	0.55	+0.0
2,343,901	+		Echvi_1989	0.56	-0.8
2,343,916	-		Echvi_1989	0.57	-1.4
2,343,922	-		Echvi_1989	0.57	+0.5
2,344,011	-		Echvi_1989	0.64	-1.8