Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1904

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,233,672	+		Echvi_1903	0.43	+0.9
2,233,676	+		Echvi_1903	0.43	+0.5
2,233,676	+		Echvi_1903	0.43	+0.9
2,233,677	-		Echvi_1903	0.43	-1.6
2,233,677	-		Echvi_1903	0.43	+0.8
2,233,677	-		Echvi_1903	0.43	+0.5
2,233,704	-		Echvi_1903	0.46	-2.0
2,233,769	-		Echvi_1903	0.52	+1.5
2,233,821	-		Echvi_1903	0.57	+0.4
2,233,865	+		Echvi_1903	0.61	+0.6
2,233,865	+		Echvi_1903	0.61	-0.3
2,233,866	-		Echvi_1903	0.61	+2.4
2,233,866	-		Echvi_1903	0.61	-0.0
2,233,882	-		Echvi_1903	0.62	-2.2
2,234,007	+		Echvi_1903	0.74	+0.8
2,234,008	-		Echvi_1903	0.74	+2.5
2,234,008	-		Echvi_1903	0.74	-0.6
2,234,050	+		Echvi_1903	0.78	+0.3
2,234,050	+		Echvi_1903	0.78	-1.1
2,234,105	-		Echvi_1903	0.83	-2.1
2,234,105	-		Echvi_1903	0.83	-0.7
2,234,105	-		Echvi_1903	0.83	-0.5
2,234,106	+		Echvi_1903	0.83	-0.2
2,234,107	-		Echvi_1903	0.83	+2.6
2,234,107	-		Echvi_1903	0.83	-0.6
2,234,107	-		Echvi_1903	0.83	+0.2
2,234,107	-		Echvi_1903	0.83	-1.0
2,234,107	-		Echvi_1903	0.83	-0.1
2,234,159	+		Echvi_1903	0.88	+1.5
2,234,159	+		Echvi_1903	0.88	-1.3
2,234,159	+		Echvi_1903	0.88	+2.0
2,234,159	+		Echvi_1903	0.88	-2.2
2,234,159	+		Echvi_1903	0.88	+0.3
2,234,160	-		Echvi_1903	0.88	-2.3
2,234,160	-		Echvi_1903	0.88	-1.7
2,234,161	+		Echvi_1903	0.88	+1.5
2,234,161	+		Echvi_1903	0.88	+2.1
2,234,162	-		Echvi_1903	0.88	+1.9
2,234,162	-		Echvi_1903	0.88	+0.6
2,234,162	-		Echvi_1903	0.88	-1.3
2,234,162	-		Echvi_1903	0.88	+0.9
2,234,162	-		Echvi_1903	0.88	+2.6
2,234,310	+				+0.2
2,234,311	-				+0.2
2,234,323	-				+0.2
2,234,332	+				-1.8
2,234,355	+				-0.9
2,234,355	+				-1.5
2,234,356	-				+6.9
2,234,373	+				-0.6
2,234,374	-				-2.9
2,234,376	-				+0.1
2,234,376	-				-2.1
2,234,410	-				-1.1
2,234,410	-				-0.3
2,234,410	-				+0.2
2,234,420	+				-0.5
2,234,462	+				-0.2
2,234,462	+				+1.5
2,234,492	-				+0.0
2,234,531	+				-1.4
2,234,532	-				+1.6
2,234,532	-				-0.1
2,234,534	-				-0.8
2,234,534	-				+0.0
2,234,534	-				+1.6
2,234,540	-				-0.0
2,234,578	-				+1.2
2,234,623	+				-0.8
2,234,624	-				+2.0
2,234,688	+		Echvi_1904	0.13	-2.3
2,234,688	+		Echvi_1904	0.13	+3.6
2,234,688	+		Echvi_1904	0.13	+2.2
2,234,689	-		Echvi_1904	0.13	+2.5
2,234,689	-		Echvi_1904	0.13	-1.1
2,234,689	-		Echvi_1904	0.13	-2.5
2,234,689	-		Echvi_1904	0.13	-3.0
2,234,856	-		Echvi_1904	0.41	+0.9
2,234,927	+		Echvi_1904	0.53	+1.6
2,234,927	+		Echvi_1904	0.53	+1.1
2,234,952	+		Echvi_1904	0.58	+0.7
2,234,953	-		Echvi_1904	0.58	+1.7
2,234,980	+		Echvi_1904	0.62	+0.1
2,234,981	-		Echvi_1904	0.62	+2.4
2,235,041	+		Echvi_1904	0.73	+0.3
2,235,175	-				-2.4
2,235,346	+				-0.3
2,235,346	+				-0.4
2,235,346	+				+1.7
2,235,347	-				-2.1
2,235,347	-				+0.4
2,235,352	+				+1.0
2,235,352	+				+1.7
2,235,353	-				-1.7
2,235,361	+				-0.3
2,235,561	+				+0.9
2,235,561	+				+0.3
2,235,561	+				-2.0
2,235,561	+				+1.4
2,235,562	-				+5.3
2,235,565	+				-0.9
2,235,565	+				-0.6
2,235,565	+				-2.4
2,235,565	+				+1.0
2,235,565	+				-1.8
2,235,566	-				+0.4
2,235,566	-				+0.8
2,235,566	-				+0.3
2,235,569	+				+2.6
2,235,569	+				+1.0
2,235,570	-				-2.6
2,235,574	+				+1.0
2,235,574	+				-0.1
2,235,575	-				+2.0
2,235,590	-				+1.5
2,235,594	+				-1.2
2,235,594	+				-0.1
2,235,594	+				-3.4
2,235,594	+				+0.5
2,235,595	-				+0.6
2,235,598	+				+2.8
2,235,598	+				-1.1
2,235,598	+				+0.6
2,235,726	+				+1.0
2,235,727	-				+0.2
2,235,742	+				+1.2
2,235,744	+				+1.5
2,235,744	+				+0.3
2,235,843	+				-1.1
2,235,843	+				-1.8
2,235,843	+				-0.2
2,235,844	-				-2.5
2,235,844	-				-1.4
2,235,853	+				-1.8
2,235,910	+				-0.9
2,235,958	+		Echvi_1906	0.10	-0.2
2,235,958	+		Echvi_1906	0.10	+0.5
2,235,958	+		Echvi_1906	0.10	+0.5
2,235,958	+		Echvi_1906	0.10	-1.4
2,235,959	-		Echvi_1906	0.10	+0.8
2,235,960	+		Echvi_1906	0.10	-0.5
2,235,960	+		Echvi_1906	0.10	-1.3
2,235,961	-		Echvi_1906	0.11	+0.4
2,235,961	-		Echvi_1906	0.11	+3.5
2,235,961	-		Echvi_1906	0.11	+2.5
2,235,961	-		Echvi_1906	0.11	-1.5
2,235,975	-		Echvi_1906	0.11	-0.5
2,235,976	+		Echvi_1906	0.11	+1.3
2,236,009	+		Echvi_1906	0.12	-2.2
2,236,010	-		Echvi_1906	0.12	+0.2
2,236,017	-		Echvi_1906	0.12	+0.1
2,236,113	+		Echvi_1906	0.15	+3.2
2,236,114	-		Echvi_1906	0.15	+0.5
2,236,126	+		Echvi_1906	0.15	-0.2
2,236,126	+		Echvi_1906	0.15	+2.0
2,236,126	+		Echvi_1906	0.15	-3.1
2,236,151	+		Echvi_1906	0.16	-0.6