Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1900

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,228,195	+		Echvi_1899	0.69	-1.3
2,228,195	+		Echvi_1899	0.69	+1.6
2,228,199	-		Echvi_1899	0.69	+1.9
2,228,199	-		Echvi_1899	0.69	-1.1
2,228,332	-		Echvi_1899	0.76	-2.1
2,228,347	-		Echvi_1899	0.77	+2.1
2,228,360	-		Echvi_1899	0.77	-1.1
2,228,396	-		Echvi_1899	0.79	-1.5
2,228,416	-		Echvi_1899	0.80	+2.0
2,228,433	+		Echvi_1899	0.81	-0.3
2,228,452	+		Echvi_1899	0.82	-1.5
2,228,453	-		Echvi_1899	0.82	-0.6
2,228,453	-		Echvi_1899	0.82	-2.6
2,228,530	-		Echvi_1899	0.86	+0.5
2,228,540	+		Echvi_1899	0.87	+0.5
2,228,540	+		Echvi_1899	0.87	+0.5
2,228,540	+		Echvi_1899	0.87	+2.8
2,228,541	-		Echvi_1899	0.87	-1.6
2,228,541	-		Echvi_1899	0.87	-0.3
2,228,542	+		Echvi_1899	0.87	+1.6
2,228,543	-		Echvi_1899	0.87	+0.4
2,228,543	-		Echvi_1899	0.87	+0.7
2,228,543	-		Echvi_1899	0.87	+0.9
2,228,548	+		Echvi_1899	0.87	-1.5
2,228,576	+		Echvi_1899	0.89	-0.3
2,228,638	+				-0.6
2,228,639	-				-1.7
2,228,673	+				+1.3
2,228,769	+				-1.5
2,228,769	+				+0.1
2,228,770	-				-2.5
2,228,770	-				-2.4
2,228,820	-				-1.2
2,228,886	+				+0.5
2,228,961	+				+0.9
2,229,012	-				-1.2
2,229,025	+				-3.4
2,229,031	+				+1.0
2,229,031	+				+0.6
2,229,031	+				+0.6
2,229,031	+				+0.8
2,229,034	+				+2.0
2,229,034	+				-1.3
2,229,034	+				-0.7
2,229,035	-				-0.7
2,229,035	-				+0.9
2,229,035	-				-1.3
2,229,037	+				-3.1
2,229,037	+				+2.4
2,229,040	+				-0.7
2,229,093	+				+2.0
2,229,094	-				-2.5
2,229,094	-				-1.4
2,229,094	-				+0.7
2,229,148	-				-0.1
2,229,165	+				-1.3
2,229,165	+				+2.6
2,229,165	+				-3.0
2,229,166	-				+0.2
2,229,166	-				+1.5
2,229,196	-		Echvi_1900	0.13	-1.3
2,229,247	-		Echvi_1900	0.27	+0.2
2,229,275	+		Echvi_1900	0.34	+1.1
2,229,275	+		Echvi_1900	0.34	+1.2
2,229,280	+		Echvi_1900	0.35	+1.3
2,229,281	-		Echvi_1900	0.36	-0.3
2,229,281	-		Echvi_1900	0.36	-1.4
2,229,293	+		Echvi_1900	0.39	-1.1
2,229,412	-		Echvi_1900	0.70	-1.9
2,229,501	+				+0.8
2,229,553	+				+2.4
2,229,631	+				+0.5
2,229,681	+				-1.1
2,229,722	+				+0.9
2,229,722	+				+3.8
2,229,722	+				+3.6
2,229,723	-				-2.8
2,229,804	-				-2.7
2,229,804	-				-1.8
2,229,804	-				-1.5
2,229,821	-				-2.6
2,229,873	-		Echvi_1901	0.12	+1.8
2,229,873	-		Echvi_1901	0.12	-0.1
2,229,896	+		Echvi_1901	0.13	-0.2
2,229,897	-		Echvi_1901	0.13	-2.6
2,229,897	-		Echvi_1901	0.13	-1.3
2,229,977	+		Echvi_1901	0.16	+0.2
2,229,978	-		Echvi_1901	0.16	+0.5
2,230,047	+		Echvi_1901	0.19	+1.5
2,230,048	-		Echvi_1901	0.19	-0.8
2,230,070	-		Echvi_1901	0.20	-0.2
2,230,159	-		Echvi_1901	0.23	-3.2
2,230,159	-		Echvi_1901	0.23	+0.9
2,230,199	+		Echvi_1901	0.25	-1.8
2,230,312	+		Echvi_1901	0.29	+2.4
2,230,312	+		Echvi_1901	0.29	+0.7
2,230,312	+				+0.5
2,230,312	+		Echvi_1901	0.29	+0.3
2,230,312	+		Echvi_1901	0.29	+0.2
2,230,313	-		Echvi_1901	0.29	-0.1
2,230,313	-		Echvi_1901	0.29	-1.3
2,230,313	-		Echvi_1901	0.29	-1.8
2,230,313	-		Echvi_1901	0.29	-1.1
2,230,313	-		Echvi_1901	0.29	+0.5
2,230,318	-		Echvi_1901	0.29	-0.5
2,230,318	-		Echvi_1901	0.29	+0.5
2,230,319	+		Echvi_1901	0.29	+2.1
2,230,347	+		Echvi_1901	0.31	-1.0
2,230,348	-		Echvi_1901	0.31	-0.3
2,230,453	-		Echvi_1901	0.35	+1.9
2,230,512	+		Echvi_1901	0.37	-0.1
2,230,516	+		Echvi_1901	0.37	+2.0
2,230,516	+		Echvi_1901	0.37	-2.6
2,230,517	-		Echvi_1901	0.37	+1.0
2,230,517	-		Echvi_1901	0.37	+0.2
2,230,517	-		Echvi_1901	0.37	-1.4
2,230,517	-		Echvi_1901	0.37	-2.5
2,230,517	-		Echvi_1901	0.37	-1.0