Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1783

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,097,930	+				+2.6
2,097,930	+				+1.5
2,097,931	-				-2.5
2,097,931	-				+0.3
2,098,038	+				-0.4
2,098,039	-				+1.2
2,098,040	+				-2.1
2,098,040	+				+1.3
2,098,040	+				-1.1
2,098,040	+				+1.9
2,098,040	+				-2.5
2,098,041	-				+0.4
2,098,042	+				-0.5
2,098,042	+				-2.4
2,098,042	+				-0.5
2,098,042	+				+3.6
2,098,042	+				-3.2
2,098,042	+				-2.1
2,098,159	+		Echvi_1782	0.16	-2.4
2,098,180	-				+1.9
2,098,180	-		Echvi_1782	0.19	-1.3
2,098,307	-		Echvi_1782	0.36	-0.3
2,098,317	-		Echvi_1782	0.38	-0.3
2,098,370	+		Echvi_1782	0.45	-0.2
2,098,370	+		Echvi_1782	0.45	+2.5
2,098,370	+		Echvi_1782	0.45	-0.3
2,098,371	-		Echvi_1782	0.45	+2.3
2,098,371	-		Echvi_1782	0.45	+3.6
2,098,371	-		Echvi_1782	0.45	+0.2
2,098,383	-		Echvi_1782	0.47	+1.1
2,098,417	+		Echvi_1782	0.51	-1.9
2,098,418	-		Echvi_1782	0.51	+1.7
2,098,418	-		Echvi_1782	0.51	-1.2
2,098,488	+		Echvi_1782	0.61	-2.1
2,098,488	+		Echvi_1782	0.61	+0.7
2,098,488	+		Echvi_1782	0.61	-0.1
2,098,526	+		Echvi_1782	0.66	-2.5
2,098,527	-		Echvi_1782	0.66	-1.0
2,098,538	+		Echvi_1782	0.68	-1.7
2,098,538	+		Echvi_1782	0.68	-3.1
2,098,627	+		Echvi_1782	0.80	-1.2
2,098,628	-		Echvi_1782	0.80	-2.1
2,098,628	-		Echvi_1782	0.80	+0.5
2,098,632	+		Echvi_1782	0.80	-0.1
2,098,632	+		Echvi_1782	0.80	+0.5
2,098,633	-		Echvi_1782	0.81	-1.5
2,098,633	-		Echvi_1782	0.81	-0.4
2,098,633	-		Echvi_1782	0.81	+0.7
2,098,633	-		Echvi_1782	0.81	-0.5
2,098,635	-		Echvi_1782	0.81	-2.1
2,098,641	+		Echvi_1782	0.82	-1.0
2,098,643	+		Echvi_1782	0.82	+3.4
2,098,644	-		Echvi_1782	0.82	-1.0
2,098,644	-		Echvi_1782	0.82	-1.4
2,098,652	-		Echvi_1782	0.83	+0.8
2,098,658	+		Echvi_1782	0.84	-1.4
2,098,658	+		Echvi_1782	0.84	-0.5
2,098,659	-		Echvi_1782	0.84	+0.3
2,098,661	+		Echvi_1782	0.84	-0.2
2,098,735	+				-1.9
2,098,735	+				+0.7
2,098,736	-				-2.0
2,098,739	+				+1.0
2,098,795	+				-0.8
2,098,798	+				-0.7
2,098,798	+				+1.0
2,098,798	+				-2.1
2,098,798	+				-2.0
2,098,798	+				+1.7
2,098,799	-				-1.5
2,098,814	+				-2.7
2,098,871	+				+0.9
2,098,872	-				-0.3
2,098,872	-				-2.4
2,098,896	-				+1.5
2,098,896	-				-0.1
2,098,921	+				-0.2
2,099,005	-		Echvi_1783	0.17	+1.0
2,099,005	-		Echvi_1783	0.17	+0.5
2,099,013	+		Echvi_1783	0.19	-1.3
2,099,013	+		Echvi_1783	0.19	+4.2
2,099,014	-		Echvi_1783	0.19	-0.5
2,099,014	-		Echvi_1783	0.19	+0.2
2,099,075	+		Echvi_1783	0.33	-2.0
2,099,075	+		Echvi_1783	0.33	+1.4
2,099,076	-		Echvi_1783	0.33	+0.6
2,099,076	-		Echvi_1783	0.33	+3.2
2,099,185	+		Echvi_1783	0.58	+0.8
2,099,214	+		Echvi_1783	0.64	+1.9
2,099,215	-		Echvi_1783	0.64	+0.2
2,099,261	+		Echvi_1783	0.75	+1.0
2,099,289	+		Echvi_1783	0.81	-1.8
2,099,290	-		Echvi_1783	0.81	+2.1
2,099,306	+		Echvi_1783	0.85	-1.8
2,099,316	+		Echvi_1783	0.87	-1.3
2,099,392	-				-1.2
2,099,398	-				-1.8
2,099,408	+				-0.8
2,099,444	+				+2.8
2,099,511	+				+1.5
2,099,524	-				-1.0
2,099,524	-				-3.7
2,099,524	-				+0.9
2,099,582	+				+2.2
2,099,582	+				-0.7
2,099,583	-				-2.4
2,099,671	+		Echvi_1784	0.13	-1.3
2,099,671	+		Echvi_1784	0.13	+0.5
2,099,671	+		Echvi_1784	0.13	-1.1
2,099,673	+		Echvi_1784	0.13	-0.3
2,099,673	+		Echvi_1784	0.13	-1.7
2,099,726	+		Echvi_1784	0.16	+1.1
2,099,816	+		Echvi_1784	0.21	+0.2
2,099,817	-		Echvi_1784	0.21	-0.5
2,099,838	+		Echvi_1784	0.23	+0.6
2,099,888	+		Echvi_1784	0.26	-1.3
2,099,914	+		Echvi_1784	0.27	+0.5
2,099,914	+		Echvi_1784	0.27	+0.6
2,099,914	+		Echvi_1784	0.27	+1.3
2,099,915	-		Echvi_1784	0.27	+1.6
2,099,915	-		Echvi_1784	0.27	-3.0
2,099,915	-		Echvi_1784	0.27	+2.7
2,099,915	-		Echvi_1784	0.27	+1.5
2,099,916	+		Echvi_1784	0.27	-2.2
2,099,990	+		Echvi_1784	0.32	-1.7
2,100,033	+		Echvi_1784	0.34	+0.9
2,100,034	-		Echvi_1784	0.34	+2.1
2,100,034	-		Echvi_1784	0.34	-0.5
2,100,037	+		Echvi_1784	0.35	-1.4
2,100,038	-		Echvi_1784	0.35	-2.7
2,100,106	+		Echvi_1784	0.39	-0.7
2,100,107	-		Echvi_1784	0.39	-2.1
2,100,161	-		Echvi_1784	0.42	-2.0
2,100,176	-		Echvi_1784	0.43	+0.0
2,100,179	+		Echvi_1784	0.43	+1.6
2,100,180	-		Echvi_1784	0.43	+0.8
2,100,180	-		Echvi_1784	0.43	-2.4
2,100,220	+		Echvi_1784	0.46	+0.2
2,100,222	+		Echvi_1784	0.46	-2.3
2,100,223	-		Echvi_1784	0.46	+2.0
2,100,254	-		Echvi_1784	0.48	+0.4
2,100,283	-		Echvi_1784	0.49	+1.6
2,100,330	+		Echvi_1784	0.52	+0.5
2,100,330	+		Echvi_1784	0.52	-0.5
2,100,347	+		Echvi_1784	0.53	-1.9
2,100,348	-		Echvi_1784	0.53	+0.5
2,100,348	-		Echvi_1784	0.53	+0.6
2,100,348	-		Echvi_1784	0.53	-2.0