Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1771

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,079,844	+		Echvi_1770	0.40	-0.6
2,079,844	+		Echvi_1770	0.40	+0.5
2,079,845	-		Echvi_1770	0.40	-0.2
2,079,845	-		Echvi_1770	0.40	-0.8
2,079,845	-		Echvi_1770	0.40	-1.1
2,079,845	-		Echvi_1770	0.40	+0.5
2,079,933	-		Echvi_1770	0.46	+1.7
2,079,949	+		Echvi_1770	0.47	-0.6
2,079,950	-		Echvi_1770	0.47	+3.5
2,080,069	+		Echvi_1770	0.55	+0.6
2,080,071	+		Echvi_1770	0.55	-1.5
2,080,071	+		Echvi_1770	0.55	-0.7
2,080,089	+		Echvi_1770	0.56	-1.6
2,080,089	+		Echvi_1770	0.56	+1.5
2,080,090	-		Echvi_1770	0.56	-1.3
2,080,123	-		Echvi_1770	0.59	+1.4
2,080,131	+		Echvi_1770	0.59	-1.7
2,080,132	-		Echvi_1770	0.59	-1.6
2,080,296	+		Echvi_1770	0.70	-0.1
2,080,297	-		Echvi_1770	0.70	-0.7
2,080,297	-		Echvi_1770	0.70	-0.5
2,080,297	-		Echvi_1770	0.70	+2.5
2,080,404	-		Echvi_1770	0.77	-2.2
2,080,408	+		Echvi_1770	0.78	-1.1
2,080,418	+		Echvi_1770	0.78	-3.1
2,080,418	+		Echvi_1770	0.78	-1.6
2,080,419	-		Echvi_1770	0.78	-1.9
2,080,505	+		Echvi_1770	0.84	-1.9
2,080,634	+				-0.5
2,080,692	-				+1.2
2,080,692	-				-1.7
2,080,733	+				+1.9
2,080,746	+				-0.1
2,080,746	+				+1.2
2,080,746	+				-1.7
2,080,746	+				-2.3
2,080,746	+				+0.3
2,080,747	-				+1.9
2,080,747	-				+2.2
2,080,747	-				-1.0
2,080,747	-				+0.5
2,080,747	-				-1.2
2,080,803	+				+1.5
2,080,927	+		Echvi_1771	0.11	+1.9
2,080,927	+		Echvi_1771	0.11	+0.9
2,080,928	-		Echvi_1771	0.11	-1.8
2,080,928	-		Echvi_1771	0.11	+0.9
2,080,928	-		Echvi_1771	0.11	+1.0
2,080,929	+		Echvi_1771	0.11	+1.4
2,080,929	+		Echvi_1771	0.11	-0.1
2,080,929	+		Echvi_1771	0.11	+1.4
2,080,929	+		Echvi_1771	0.11	+2.0
2,080,929	+		Echvi_1771	0.11	+2.6
2,080,929	+		Echvi_1771	0.11	+0.5
2,080,930	-		Echvi_1771	0.11	-0.4
2,080,980	-		Echvi_1771	0.15	+1.5
2,081,010	-		Echvi_1771	0.17	+2.5
2,081,083	+		Echvi_1771	0.21	+1.2
2,081,083	+		Echvi_1771	0.21	-1.4
2,081,088	+		Echvi_1771	0.22	+2.0
2,081,088	+		Echvi_1771	0.22	+2.1
2,081,089	-		Echvi_1771	0.22	+1.6
2,081,263	-		Echvi_1771	0.33	+1.0
2,081,263	-		Echvi_1771	0.33	+1.1
2,081,263	-		Echvi_1771	0.33	-0.8
2,081,266	+		Echvi_1771	0.33	+1.5
2,081,366	+		Echvi_1771	0.39	+3.6
2,081,366	+		Echvi_1771	0.39	-0.8
2,081,366	+		Echvi_1771	0.39	-2.8
2,081,367	-		Echvi_1771	0.39	+2.8
2,081,491	+		Echvi_1771	0.47	+1.9
2,081,569	+		Echvi_1771	0.52	+4.2
2,081,570	-		Echvi_1771	0.52	+0.5
2,081,654	-		Echvi_1771	0.58	-1.7
2,081,678	+		Echvi_1771	0.59	+1.9
2,081,678	+		Echvi_1771	0.59	+0.0
2,081,720	-		Echvi_1771	0.62	+0.5
2,081,753	-		Echvi_1771	0.64	-0.9
2,081,753	-		Echvi_1771	0.64	+4.2
2,081,846	+		Echvi_1771	0.70	-3.0
2,081,860	+		Echvi_1771	0.71	+0.4
2,081,864	-		Echvi_1771	0.71	+3.2
2,081,984	+		Echvi_1771	0.79	+1.1
2,081,984	+		Echvi_1771	0.79	+2.2
2,081,985	-		Echvi_1771	0.79	+2.3
2,081,985	-		Echvi_1771	0.79	+1.5
2,081,985	-		Echvi_1771	0.79	-2.5
2,082,116	+		Echvi_1771	0.87	+0.4
2,082,117	-		Echvi_1771	0.87	-0.7
2,082,141	+		Echvi_1771	0.89	+2.9
2,082,150	+		Echvi_1771	0.89	+1.5
2,082,151	-		Echvi_1771	0.89	+0.1
2,082,193	+				+3.9
2,082,193	+				+1.2
2,082,212	-				+0.7
2,082,255	+				+0.2
2,082,287	-				+1.1
2,082,333	+				-2.1
2,082,350	+				+1.5
2,082,351	-				-0.1
2,082,351	-				+1.3
2,082,356	-				-0.3
2,082,369	-				+1.1
2,082,382	-				-2.2
2,082,396	-				+0.2
2,082,441	-				+3.0
2,082,727	+				-1.9
2,082,734	+				-0.8
2,082,761	+				-0.3
2,082,761	+				+2.7
2,082,761	+				-3.5
2,082,762	-				-1.7
2,082,765	+				+1.7
2,082,765	+				+0.1
2,082,765	+				-0.3
2,082,766	-				+0.6
2,082,766	-				+0.5
2,082,766	-				-1.1
2,082,766	-				-2.4
2,082,766	-				+3.3
2,082,766	-				+1.5
2,082,899	+				-0.2
2,082,951	-				+3.3
2,083,068	-				-1.6
2,083,078	+				+0.3
2,083,079	-				+1.7
2,083,079	-				-1.0
2,083,079	-				+0.2
2,083,079	-				+2.3
2,083,079	-				+1.4
2,083,189	+				+0.5
2,083,189	+				-0.1
2,083,195	-				+1.0
2,083,264	+		Echvi_1772	0.14	-2.5
2,083,265	-		Echvi_1772	0.14	-1.5
2,083,265	-		Echvi_1772	0.14	+2.1
2,083,290	+		Echvi_1772	0.18	+1.3
2,083,290	+		Echvi_1772	0.18	-1.1
2,083,290	+		Echvi_1772	0.18	-0.7
2,083,291	-		Echvi_1772	0.18	-1.2