Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1253

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,439,472	+				+0.5
1,439,472	+				-0.1
1,439,473	-				-2.1
1,439,473	-				-0.5
1,439,514	+				+3.2
1,439,514	+				+0.0
1,439,514	+				-0.1
1,439,523	+				-0.1
1,439,523	+				-3.2
1,439,523	+				+1.8
1,439,523	+				-0.1
1,439,527	-				+2.0
1,439,552	+				+0.8
1,439,621	+		Echvi_1252	0.12	+3.7
1,439,703	+		Echvi_1252	0.23	+1.5
1,439,703	+		Echvi_1252	0.23	+0.2
1,439,703	+		Echvi_1252	0.23	-1.1
1,439,709	+		Echvi_1252	0.24	+2.5
1,439,709	+		Echvi_1252	0.24	-1.5
1,439,709	+		Echvi_1252	0.24	-0.9
1,439,710	-		Echvi_1252	0.24	+0.0
1,439,710	-		Echvi_1252	0.24	-1.9
1,439,710	-		Echvi_1252	0.24	+0.9
1,439,710	-		Echvi_1252	0.24	-0.7
1,439,710	-		Echvi_1252	0.24	+0.0
1,439,791	+		Echvi_1252	0.35	-0.1
1,439,792	-		Echvi_1252	0.35	-0.3
1,439,792	-		Echvi_1252	0.35	+1.5
1,439,874	-		Echvi_1252	0.45	+1.5
1,439,876	+		Echvi_1252	0.46	-0.5
1,439,909	+		Echvi_1252	0.50	-0.4
1,439,910	-		Echvi_1252	0.50	+0.2
1,439,910	-		Echvi_1252	0.50	+0.5
1,439,912	+		Echvi_1252	0.50	-1.1
1,439,912	+		Echvi_1252	0.50	-1.4
1,439,913	-		Echvi_1252	0.50	+3.9
1,439,913	-		Echvi_1252	0.50	+0.9
1,439,914	+		Echvi_1252	0.50	+1.6
1,439,915	-		Echvi_1252	0.51	-0.0
1,439,915	-		Echvi_1252	0.51	+1.4
1,439,915	-		Echvi_1252	0.51	-2.8
1,439,915	-		Echvi_1252	0.51	+1.5
1,439,938	-		Echvi_1252	0.54	+1.9
1,439,960	+		Echvi_1252	0.56	+0.8
1,440,013	-		Echvi_1252	0.63	-1.4
1,440,033	+		Echvi_1252	0.66	+0.5
1,440,119	+		Echvi_1252	0.77	+1.1
1,440,119	+		Echvi_1252	0.77	+1.4
1,440,119	+		Echvi_1252	0.77	+1.3
1,440,119	+		Echvi_1252	0.77	-2.9
1,440,120	-		Echvi_1252	0.77	-1.9
1,440,120	-		Echvi_1252	0.77	-0.9
1,440,177	+		Echvi_1252	0.85	+1.6
1,440,177	+		Echvi_1252	0.85	+0.7
1,440,203	-		Echvi_1252	0.88	-2.8
1,440,207	-		Echvi_1252	0.88	-0.1
1,440,295	+				+1.2
1,440,312	+				+1.0
1,440,312	+				-0.7
1,440,312	+				-2.1
1,440,313	-				+0.9
1,440,313	-				+3.3
1,440,313	-				+1.0
1,440,316	+				-0.9
1,440,316	+				+1.2
1,440,355	+				+1.1
1,440,356	-				+0.8
1,440,356	-				+1.4
1,440,356	-				-0.1
1,440,356	-				+0.3
1,440,356	-				+0.2
1,440,427	-				+0.0
1,440,463	+				+0.4
1,440,463	+				+0.3
1,440,463	+				-3.1
1,440,463	+				-0.3
1,440,463	+				-1.2
1,440,463	+				+0.7
1,440,463	+				+0.7
1,440,463	+				+0.9
1,440,463	+				+1.5
1,440,464	-				-0.3
1,440,464	-				-3.4
1,440,464	-				-2.1
1,440,464	-				+1.0
1,440,464	-				-3.4
1,440,464	-				-1.9
1,440,464	-				-0.9
1,440,464	-				+2.0
1,440,464	-				-2.4
1,440,465	+				-2.4
1,440,465	+				-1.7
1,440,466	-				-0.5
1,440,466	-				-2.7
1,440,532	+		Echvi_1253	0.15	-0.4
1,440,627	+		Echvi_1253	0.35	+0.5
1,440,664	+		Echvi_1253	0.42	-1.5
1,440,664	+		Echvi_1253	0.42	-2.0
1,440,664	+		Echvi_1253	0.42	-1.4
1,440,664	+		Echvi_1253	0.42	-1.6
1,440,664	+		Echvi_1253	0.42	+0.5
1,440,664	+		Echvi_1253	0.42	-1.6
1,440,664	+		Echvi_1253	0.42	-0.7
1,440,665	-		Echvi_1253	0.43	-1.9
1,440,665	-		Echvi_1253	0.43	-1.9
1,440,665	-		Echvi_1253	0.43	-1.6
1,440,665	-		Echvi_1253	0.43	-1.8
1,440,665	-		Echvi_1253	0.43	-0.9
1,440,668	-		Echvi_1253	0.43	+0.3
1,440,677	-		Echvi_1253	0.45	-2.4
1,440,677	-		Echvi_1253	0.45	-2.7
1,440,703	+		Echvi_1253	0.51	-1.7
1,440,716	-		Echvi_1253	0.53	+1.6
1,440,855	+		Echvi_1253	0.82	-0.1
1,440,858	+		Echvi_1253	0.83	-3.3
1,440,859	-		Echvi_1253	0.83	+0.9
1,440,859	-		Echvi_1253	0.83	-0.7
1,440,862	+		Echvi_1253	0.84	+0.2
1,440,862	+		Echvi_1253	0.84	-1.9
1,440,862	+		Echvi_1253	0.84	+0.6
1,440,863	-		Echvi_1253	0.84	-1.3
1,440,863	-		Echvi_1253	0.84	+1.4
1,440,863	-		Echvi_1253	0.84	+0.5
1,440,863	-		Echvi_1253	0.84	+0.3
1,440,863	-		Echvi_1253	0.84	+1.4
1,440,863	-		Echvi_1253	0.84	-0.7
1,440,875	+		Echvi_1253	0.86	-2.7
1,440,889	+		Echvi_1253	0.89	-2.5
1,440,903	-				+2.7
1,440,903	-				-2.9
1,440,903	-				-2.0
1,441,001	+				+0.3
1,441,001	+				+2.2
1,441,002	-				+1.7
1,441,047	+				+2.0
1,441,048	-				-1.2
1,441,049	+				-1.1
1,441,050	-				+0.5
1,441,050	-				-1.7
1,441,050	-				-1.9
1,441,059	-				+0.3
1,441,076	-				-3.1
1,441,080	+				-0.0
1,441,141	-		Echvi_1254	0.28	-0.7
1,441,169	-		Echvi_1254	0.36	+0.5
1,441,173	+		Echvi_1254	0.37	+1.3
1,441,173	+		Echvi_1254	0.37	-2.2
1,441,173	+		Echvi_1254	0.37	+4.1
1,441,270	+		Echvi_1254	0.65	-1.7
1,441,271	-		Echvi_1254	0.66	+0.8
1,441,395	-				+1.1
1,441,405	+				-1.9
1,441,536	-				-0.1
1,441,536	-				+1.6
1,441,548	-				+2.5
1,441,600	-		Echvi_1255	0.15	+2.4
1,441,604	-		Echvi_1255	0.16	+2.0
1,441,635	+		Echvi_1255	0.23	-0.8
1,441,635	+		Echvi_1255	0.23	-0.9
1,441,635	+		Echvi_1255	0.23	+0.9
1,441,636	-		Echvi_1255	0.23	+2.3
1,441,715	+		Echvi_1255	0.41	+1.9
1,441,715	+		Echvi_1255	0.41	-0.4
1,441,715	+		Echvi_1255	0.41	+3.1
1,441,715	+		Echvi_1255	0.41	+0.6
1,441,716	-		Echvi_1255	0.41	+0.8
1,441,780	+		Echvi_1255	0.56	+0.4
1,441,917	+		Echvi_1255	0.86	-0.5
1,441,917	+		Echvi_1255	0.86	+0.4