Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1226

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,405,434	+		Echvi_1225	0.58	+0.2
1,405,456	+		Echvi_1225	0.59	+0.5
1,405,484	+		Echvi_1225	0.61	-1.5
1,405,485	-		Echvi_1225	0.61	-2.8
1,405,510	+		Echvi_1225	0.62	-1.7
1,405,510	+		Echvi_1225	0.62	-1.2
1,405,512	+		Echvi_1225	0.63	-1.1
1,405,512	+		Echvi_1225	0.63	+1.0
1,405,512	+		Echvi_1225	0.63	-0.9
1,405,513	-		Echvi_1225	0.63	+0.4
1,405,561	-		Echvi_1225	0.66	-2.3
1,405,569	+		Echvi_1225	0.66	-1.4
1,405,609	+		Echvi_1225	0.69	-1.3
1,405,609	+		Echvi_1225	0.69	+0.2
1,405,610	-		Echvi_1225	0.69	-0.3
1,405,610	-		Echvi_1225	0.69	-3.2
1,405,666	-		Echvi_1225	0.72	+0.2
1,405,918	+		Echvi_1225	0.88	-2.0
1,405,918	+		Echvi_1225	0.88	+2.2
1,405,934	+		Echvi_1225	0.89	-1.7
1,405,935	-		Echvi_1225	0.89	-1.1
1,405,977	-				+1.4
1,405,977	-				+1.3
1,405,989	+				+1.5
1,405,990	-				+1.8
1,406,057	+				+0.9
1,406,057	+				-1.2
1,406,058	-				-1.2
1,406,058	-				+0.9
1,406,058	-				-3.1
1,406,117	-				-1.4
1,406,117	-				+0.6
1,406,180	+				-1.6
1,406,181	-				-0.3
1,406,213	-				+1.3
1,406,218	+				-1.7
1,406,218	+				-1.7
1,406,285	+				+2.0
1,406,285	+				+0.7
1,406,285	+				-1.1
1,406,286	-				+0.2
1,406,304	-				-2.4
1,406,309	+				+2.2
1,406,310	-				+2.1
1,406,367	+				-1.6
1,406,372	-				+0.4
1,406,372	-				+0.2
1,406,406	+				-3.2
1,406,406	+				+1.9
1,406,407	-				-1.1
1,406,465	-				+3.5
1,406,465	-				+1.2
1,406,497	+				+1.3
1,406,562	+		Echvi_1226	0.11	-0.1
1,406,563	-		Echvi_1226	0.11	-1.6
1,406,572	+		Echvi_1226	0.11	+1.4
1,406,701	-		Echvi_1226	0.19	-0.3
1,406,708	-		Echvi_1226	0.19	+0.5
1,406,722	+		Echvi_1226	0.20	-0.7
1,406,723	-		Echvi_1226	0.20	+0.5
1,406,730	-		Echvi_1226	0.20	-1.8
1,406,750	+		Echvi_1226	0.21	+2.0
1,406,750	+		Echvi_1226	0.21	-1.1
1,406,750	+		Echvi_1226	0.21	-0.1
1,406,751	-		Echvi_1226	0.21	-2.6
1,406,753	+		Echvi_1226	0.21	-3.7
1,406,768	+		Echvi_1226	0.22	+0.5
1,406,768	+		Echvi_1226	0.22	+4.1
1,406,961	+		Echvi_1226	0.33	-2.3
1,406,985	+		Echvi_1226	0.35	-1.8
1,407,029	-		Echvi_1226	0.37	-0.9
1,407,046	+		Echvi_1226	0.38	+0.2
1,407,047	-		Echvi_1226	0.38	-1.5
1,407,047	-		Echvi_1226	0.38	+0.2
1,407,047	-		Echvi_1226	0.38	-2.7
1,407,047	-		Echvi_1226	0.38	-1.3
1,407,081	-		Echvi_1226	0.40	+0.2
1,407,111	+		Echvi_1226	0.42	-1.7
1,407,112	-		Echvi_1226	0.42	-1.9
1,407,112	-		Echvi_1226	0.42	-1.0
1,407,132	-		Echvi_1226	0.43	+0.7
1,407,220	-		Echvi_1226	0.48	-1.5
1,407,283	+		Echvi_1226	0.51	-3.2
1,407,284	-		Echvi_1226	0.51	+1.5
1,407,361	+		Echvi_1226	0.56	+0.1
1,407,361	+		Echvi_1226	0.56	+0.5
1,407,362	-		Echvi_1226	0.56	-2.0
1,407,362	-		Echvi_1226	0.56	-3.3
1,407,362	-		Echvi_1226	0.56	-2.7
1,407,362	-		Echvi_1226	0.56	-0.1
1,407,362	-		Echvi_1226	0.56	-1.8
1,407,362	-		Echvi_1226	0.56	-0.7
1,407,441	+		Echvi_1226	0.60	-0.6
1,407,441	+		Echvi_1226	0.60	-2.0
1,407,442	-		Echvi_1226	0.60	-1.3
1,407,452	+		Echvi_1226	0.61	-2.7
1,407,546	-		Echvi_1226	0.66	-1.0
1,407,548	-		Echvi_1226	0.66	+2.5
1,407,548	-		Echvi_1226	0.66	+1.2
1,407,638	-		Echvi_1226	0.71	+0.2
1,407,666	+		Echvi_1226	0.73	-1.1
1,407,695	+		Echvi_1226	0.74	-0.5
1,407,695	+		Echvi_1226	0.74	+1.2
1,407,747	-		Echvi_1226	0.77	+1.1
1,407,803	+		Echvi_1226	0.80	-2.3
1,408,080	-				-1.4
1,408,080	-				+1.5
1,408,083	+				-1.7
1,408,083	+				-2.5
1,408,084	-				-2.7
1,408,089	+				-1.5
1,408,151	+				+0.9
1,408,151	+				+1.0
1,408,152	-				-0.5
1,408,152	-				-0.5
1,408,152	-				+0.5
1,408,157	-				-2.1
1,408,158	+				-2.2
1,408,159	-				+0.5
1,408,159	-				+1.1
1,408,186	-				+0.2
1,408,222	-				+0.5
1,408,378	-		Echvi_1227	0.51	-0.3
1,408,378	-		Echvi_1227	0.51	-1.9
1,408,477	+				+1.6
1,408,482	+				+0.9
1,408,499	+				-2.4
1,408,509	+				+0.2
1,408,509	+				-1.3
1,408,563	+				+0.6
1,408,564	-				+0.2
1,408,573	+				-0.8
1,408,573	+				-1.9
1,408,641	-		Echvi_1228	0.12	-3.7
1,408,641	-		Echvi_1228	0.12	-0.3
1,408,711	-		Echvi_1228	0.18	-1.1
1,408,894	+		Echvi_1228	0.35	-1.5
1,408,894	+		Echvi_1228	0.35	+1.9
1,408,895	-		Echvi_1228	0.35	+0.4
1,408,895	-		Echvi_1228	0.35	+1.3
1,408,923	+		Echvi_1228	0.38	+0.9
1,408,924	-		Echvi_1228	0.38	-1.1
1,408,924	-		Echvi_1228	0.38	-1.4
1,409,077	-		Echvi_1228	0.52	-0.8
1,409,091	-		Echvi_1228	0.53	+0.3
1,409,132	+		Echvi_1228	0.57	-0.1