Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1215

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,393,079	-		Echvi_1214	0.86	+3.5
1,393,200	+				+2.0
1,393,212	-				+3.0
1,393,212	-				+3.5
1,393,238	-				-2.3
1,393,241	+				-0.6
1,393,241	+				-1.9
1,393,269	+				+2.7
1,393,309	-				-0.5
1,393,326	+				-1.5
1,393,400	+				-0.5
1,393,400	+				-0.2
1,393,400	+				-2.4
1,393,401	-				-1.9
1,393,488	+				-0.7
1,393,489	-				-1.5
1,393,513	+		Echvi_1215	0.10	-0.8
1,393,514	-		Echvi_1215	0.11	-2.6
1,393,555	+		Echvi_1215	0.13	+1.5
1,393,555	+		Echvi_1215	0.13	-2.1
1,393,556	-		Echvi_1215	0.13	-3.0
1,393,556	-		Echvi_1215	0.13	-0.7
1,393,556	-		Echvi_1215	0.13	-1.8
1,393,570	+		Echvi_1215	0.13	-1.9
1,393,577	-		Echvi_1215	0.14	-2.2
1,393,577	-		Echvi_1215	0.14	-2.3
1,393,577	-		Echvi_1215	0.14	-0.7
1,393,580	-		Echvi_1215	0.14	-2.7
1,393,616	-		Echvi_1215	0.16	-0.5
1,393,616	-		Echvi_1215	0.16	-1.0
1,393,616	-		Echvi_1215	0.16	-1.5
1,393,616	-		Echvi_1215	0.16	-1.4
1,393,616	-		Echvi_1215	0.16	-3.7
1,393,616	-		Echvi_1215	0.16	-2.0
1,393,728	+		Echvi_1215	0.21	-1.3
1,393,728	+		Echvi_1215	0.21	-0.5
1,393,728	+		Echvi_1215	0.21	-1.3
1,393,729	-		Echvi_1215	0.21	+1.9
1,393,732	+		Echvi_1215	0.21	-2.0
1,393,733	-		Echvi_1215	0.21	-3.3
1,393,733	-		Echvi_1215	0.21	-3.6
1,393,743	+		Echvi_1215	0.22	-2.2
1,393,762	-		Echvi_1215	0.23	-2.7
1,393,770	-		Echvi_1215	0.23	-4.6
1,393,860	+		Echvi_1215	0.27	-2.8
1,393,861	-		Echvi_1215	0.28	-1.2
1,393,912	+		Echvi_1215	0.30	-0.1
1,393,912	+		Echvi_1215	0.30	-2.1
1,393,912	+		Echvi_1215	0.30	-2.1
1,393,913	-		Echvi_1215	0.30	-0.3
1,393,997	+		Echvi_1215	0.34	-1.6
1,393,998	-		Echvi_1215	0.34	-3.7
1,393,998	-		Echvi_1215	0.34	-0.8
1,394,001	+		Echvi_1215	0.34	-2.3
1,394,002	-		Echvi_1215	0.34	-1.1
1,394,002	-		Echvi_1215	0.34	-1.2
1,394,022	-		Echvi_1215	0.35	-0.8
1,394,022	-		Echvi_1215	0.35	-1.8
1,394,218	+		Echvi_1215	0.45	-1.8
1,394,291	-		Echvi_1215	0.49	-2.6
1,394,291	-		Echvi_1215	0.49	-3.8
1,394,291	-		Echvi_1215	0.49	-4.1
1,394,291	-		Echvi_1215	0.49	-1.2
1,394,291	-		Echvi_1215	0.49	-3.5
1,394,291	-		Echvi_1215	0.49	-0.8
1,394,291	-		Echvi_1215	0.49	-2.1
1,394,291	-		Echvi_1215	0.49	-3.2
1,394,292	+		Echvi_1215	0.49	-1.3
1,394,292	+		Echvi_1215	0.49	-2.1
1,394,292	+		Echvi_1215	0.49	-0.1
1,394,292	+		Echvi_1215	0.49	-1.2
1,394,293	-		Echvi_1215	0.49	-2.1
1,394,293	-		Echvi_1215	0.49	-0.5
1,394,293	-		Echvi_1215	0.49	-0.7
1,394,293	-		Echvi_1215	0.49	+2.5
1,394,369	+		Echvi_1215	0.52	-2.8
1,394,369	+		Echvi_1215	0.52	-1.8
1,394,383	+		Echvi_1215	0.53	-0.3
1,394,464	+		Echvi_1215	0.57	-1.2
1,394,464	+		Echvi_1215	0.57	+0.4
1,394,464	+		Echvi_1215	0.57	-0.6
1,394,465	-		Echvi_1215	0.57	+0.1
1,394,519	+		Echvi_1215	0.60	-1.4
1,394,562	-		Echvi_1215	0.62	-0.8
1,394,623	-		Echvi_1215	0.65	-1.4
1,394,656	-		Echvi_1215	0.67	-1.6
1,394,751	-		Echvi_1215	0.71	-1.4
1,394,802	+		Echvi_1215	0.74	-1.9
1,394,803	-		Echvi_1215	0.74	-2.6
1,394,803	-		Echvi_1215	0.74	-1.8
1,394,950	+		Echvi_1215	0.81	+0.2
1,394,950	+		Echvi_1215	0.81	-1.4
1,394,950	+		Echvi_1215	0.81	-1.4
1,394,950	+		Echvi_1215	0.81	+0.2
1,394,951	-		Echvi_1215	0.81	-0.7
1,394,951	-		Echvi_1215	0.81	-1.1
1,394,951	-		Echvi_1215	0.81	-1.7
1,395,026	-		Echvi_1215	0.85	-0.3
1,395,026	-		Echvi_1215	0.85	-1.2
1,395,046	-		Echvi_1215	0.86	-1.7
1,395,157	+				-0.1
1,395,182	-				-1.4
1,395,182	-				-3.1
1,395,182	-				+1.5
1,395,182	-				-3.6
1,395,189	+				-2.0
1,395,350	-				+0.5
1,395,356	-				+2.1
1,395,421	-		Echvi_1216	0.19	+2.7
1,395,421	-		Echvi_1216	0.19	+1.0
1,395,421	-		Echvi_1216	0.19	-0.3
1,395,421	-		Echvi_1216	0.19	+0.6
1,395,452	+		Echvi_1216	0.26	+2.2
1,395,504	+		Echvi_1216	0.38	-0.9
1,395,505	-		Echvi_1216	0.39	+2.4
1,395,505	-		Echvi_1216	0.39	-1.1
1,395,517	-		Echvi_1216	0.41	+1.4
1,395,517	-		Echvi_1216	0.41	-0.1
1,395,518	+		Echvi_1216	0.42	+0.1
1,395,519	-		Echvi_1216	0.42	-0.6
1,395,519	-		Echvi_1216	0.42	-1.1
1,395,541	-		Echvi_1216	0.47	-0.4
1,395,541	-		Echvi_1216	0.47	-0.5
1,395,548	+		Echvi_1216	0.48	+0.4
1,395,548	+		Echvi_1216	0.48	-1.3
1,395,553	-		Echvi_1216	0.50	-1.9
1,395,553	-		Echvi_1216	0.50	+1.8
1,395,553	-		Echvi_1216	0.50	+1.9
1,395,572	-		Echvi_1216	0.54	+1.3
1,395,588	+		Echvi_1216	0.58	+1.2
1,395,668	+		Echvi_1216	0.76	-2.1
1,395,668	+		Echvi_1216	0.76	-2.2
1,395,669	-		Echvi_1216	0.76	-0.5
1,395,714	+		Echvi_1216	0.86	-1.1
1,395,714	+		Echvi_1216	0.86	-1.3
1,395,715	-		Echvi_1216	0.87	-0.0
1,395,715	-		Echvi_1216	0.87	-1.3
1,395,718	-		Echvi_1216	0.87	-0.3
1,395,718	-		Echvi_1216	0.87	+1.5
1,395,771	+				-0.5
1,395,776	+				-1.3
1,395,776	+				+1.3
1,395,777	-				-1.9
1,395,777	-				-1.0
1,395,782	-				-2.7
1,395,782	-				+0.8
1,395,832	+				+2.0
1,395,833	-				+2.4
1,395,833	-				+0.8
1,395,836	+				-1.0
1,395,839	-				+1.7
1,395,845	+				-3.7
1,395,925	+		Echvi_1217	0.22	+2.4
1,395,925	+		Echvi_1217	0.22	-0.0
1,395,926	-		Echvi_1217	0.22	+0.5
1,395,926	-		Echvi_1217	0.22	-1.2
1,395,949	+				+1.5
1,395,950	-		Echvi_1217	0.26	+1.0
1,395,963	+		Echvi_1217	0.28	-2.5
1,395,964	-		Echvi_1217	0.28	+1.5
1,395,981	+		Echvi_1217	0.31	-1.2
1,395,981	+		Echvi_1217	0.31	-2.5
1,395,982	-		Echvi_1217	0.31	+2.0
1,395,982	-		Echvi_1217	0.31	+2.8
1,395,982	-		Echvi_1217	0.31	-2.1
1,395,982	-		Echvi_1217	0.31	+1.1
1,395,982	-		Echvi_1217	0.31	+0.5
1,396,024	+		Echvi_1217	0.37	-1.0
1,396,025	-		Echvi_1217	0.37	+0.5
1,396,025	-		Echvi_1217	0.37	+1.7
1,396,030	-		Echvi_1217	0.38	-0.5
1,396,030	-		Echvi_1217	0.38	+1.7
1,396,030	-		Echvi_1217	0.38	+0.7
1,396,030	-		Echvi_1217	0.38	-1.4
1,396,110	+		Echvi_1217	0.51	-3.0
1,396,111	-		Echvi_1217	0.51	+2.3
1,396,111	-		Echvi_1217	0.51	-0.8
1,396,117	-		Echvi_1217	0.52	-1.0
1,396,165	+		Echvi_1217	0.59	+2.9
1,396,220	+		Echvi_1217	0.68	+0.9
1,396,220	+		Echvi_1217	0.68	+0.6
1,396,220	+		Echvi_1217	0.68	-1.1
1,396,234	-		Echvi_1217	0.70	+2.0
1,396,286	+		Echvi_1217	0.78	-1.7
1,396,300	-		Echvi_1217	0.80	+1.8
1,396,300	-		Echvi_1217	0.80	-0.5