Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1191

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,365,583	-				+0.5
1,365,607	+				-0.5
1,365,608	-				+2.3
1,365,663	+				+1.5
1,365,664	-				+1.7
1,365,664	-				+2.4
1,365,753	+		Echvi_1190	0.18	-0.5
1,365,853	+		Echvi_1190	0.33	-1.5
1,365,853	+		Echvi_1190	0.33	+2.5
1,365,942	+		Echvi_1190	0.46	-0.5
1,365,972	+		Echvi_1190	0.50	-1.4
1,365,973	-		Echvi_1190	0.50	+1.2
1,366,018	-		Echvi_1190	0.57	+2.0
1,366,034	-		Echvi_1190	0.59	-0.1
1,366,060	+		Echvi_1190	0.63	+1.0
1,366,061	-		Echvi_1190	0.63	-2.2
1,366,202	+		Echvi_1190	0.83	+0.7
1,366,255	+				+0.4
1,366,255	+				+0.4
1,366,256	-				-0.2
1,366,256	-				-0.2
1,366,256	-				-2.7
1,366,353	+				+1.5
1,366,354	-				+0.4
1,366,354	-				+0.5
1,366,358	+				+0.4
1,366,359	-				-1.8
1,366,359	-				-1.2
1,366,424	-				-1.1
1,366,435	+				-1.9
1,366,435	+				-0.0
1,366,526	-				-1.3
1,366,526	-				-1.8
1,366,526	-				-2.0
1,366,526	-				-0.2
1,366,526	-				-0.1
1,366,526	-				+2.0
1,366,526	-				-1.0
1,366,528	+				-0.5
1,366,528	+				+0.9
1,366,528	+				+1.4
1,366,528	+				-0.3
1,366,528	+				+3.7
1,366,529	-				+0.1
1,366,529	-				+0.4
1,366,529	-				-0.3
1,366,529	-				-0.1
1,366,529	-				+1.1
1,366,529	-				+1.6
1,366,529	-				-1.3
1,366,531	+				+0.4
1,368,396	-				-0.5
1,368,459	-				-1.9
1,368,459	-				+0.5
1,368,459	-				-0.7
1,368,459	-				+1.4
1,368,586	+		Echvi_1192	0.31	-3.6
1,368,586	+		Echvi_1192	0.31	+1.4
1,368,596	+		Echvi_1192	0.34	+2.3
1,368,613	+		Echvi_1192	0.40	-0.5
1,368,614	-		Echvi_1192	0.40	-2.0
1,368,621	-		Echvi_1192	0.42	+1.0
1,368,703	-		Echvi_1192	0.68	+0.4
1,368,703	-		Echvi_1192	0.68	+2.5
1,368,739	+		Echvi_1192	0.79	-0.3
1,368,768	+		Echvi_1192	0.88	-0.7
1,368,768	+		Echvi_1192	0.88	-0.4
1,368,768	+		Echvi_1192	0.88	-2.4
1,368,768	+		Echvi_1192	0.88	-1.7
1,368,768	+		Echvi_1192	0.88	-1.7
1,368,769	-		Echvi_1192	0.89	-0.5
1,368,769	-		Echvi_1192	0.89	-1.4
1,368,783	+				+0.9
1,368,836	+				-0.9
1,368,837	-				-1.4
1,368,837	-				-2.8
1,368,837	-				+0.1
1,368,847	+				+1.3
1,368,869	+				+2.5
1,368,869	+				+1.9
1,368,869	+				+0.0
1,368,869	+				-0.5
1,368,869	+				+0.9
1,368,870	-				-0.1
1,368,870	-				-1.8
1,368,880	+				+0.7
1,368,881	-				-0.5
1,368,899	+				-3.7
1,368,915	+				-3.1
1,368,915	+				+2.2
1,368,929	+				-0.8
1,368,930	-				+0.5
1,368,930	-				-3.4
1,368,960	-				+0.5
1,368,960	-				+0.5
1,368,960	-				-3.0
1,368,969	+				+0.7
1,368,969	+				+0.4
1,368,969	+				-0.2
1,368,969	+				+0.9
1,368,969	+				-1.2
1,368,969	+				+1.0
1,368,969	+				-3.8
1,368,970	-				+0.6
1,368,970	-				+0.5
1,368,970	-				-2.9
1,368,970	-				-2.0
1,369,059	-				-2.1
1,369,059	-				+1.2
1,369,059	-				-1.4
1,369,085	+		Echvi_1193	0.11	-1.8
1,369,143	-		Echvi_1193	0.14	-2.3
1,369,203	+		Echvi_1193	0.18	+2.3
1,369,203	+		Echvi_1193	0.18	+0.8
1,369,204	-		Echvi_1193	0.18	+0.9
1,369,234	+		Echvi_1193	0.19	-3.4
1,369,255	+		Echvi_1193	0.21	-1.0
1,369,255	+		Echvi_1193	0.21	+2.4
1,369,255	+		Echvi_1193	0.21	+0.7
1,369,277	+		Echvi_1193	0.22	-0.3
1,369,277	+		Echvi_1193	0.22	+0.6
1,369,278	-		Echvi_1193	0.22	+0.2
1,369,289	+		Echvi_1193	0.23	-1.1
1,369,290	-		Echvi_1193	0.23	-2.0
1,369,322	+		Echvi_1193	0.24	-1.8
1,369,322	+		Echvi_1193	0.24	-1.7
1,369,322	+		Echvi_1193	0.24	-0.5
1,369,323	-		Echvi_1193	0.25	-1.9
1,369,325	+		Echvi_1193	0.25	-0.8
1,369,325	+		Echvi_1193	0.25	-0.8