Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1170

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,343,324	+				+1.0
1,343,324	+				-1.4
1,343,415	-				-1.4
1,343,415	-				+0.6
1,343,415	-				-2.0
1,343,631	+		Echvi_1169	0.19	+0.4
1,343,642	-		Echvi_1169	0.20	-1.4
1,343,642	-		Echvi_1169	0.20	-1.0
1,343,703	+		Echvi_1169	0.28	+0.8
1,343,770	+		Echvi_1169	0.36	-0.4
1,343,771	-		Echvi_1169	0.36	-0.7
1,343,843	+		Echvi_1169	0.45	-0.7
1,343,844	-		Echvi_1169	0.45	-1.4
1,343,844	-		Echvi_1169	0.45	+2.0
1,344,015	+		Echvi_1169	0.65	-2.0
1,344,036	-		Echvi_1169	0.68	-0.8
1,344,050	+		Echvi_1169	0.70	-1.0
1,344,050	+		Echvi_1169	0.70	+0.5
1,344,050	+		Echvi_1169	0.70	-1.4
1,344,051	-		Echvi_1169	0.70	-0.5
1,344,051	-		Echvi_1169	0.70	-1.0
1,344,151	+		Echvi_1169	0.82	-2.9
1,344,250	+				+1.9
1,344,250	+				-0.2
1,344,251	-				+1.0
1,344,279	+				-2.4
1,344,279	+				-1.9
1,344,280	-				+1.2
1,344,280	-				+0.0
1,344,280	-				+1.3
1,344,280	-				-0.8
1,344,282	+				+2.4
1,344,419	+		Echvi_1170	0.32	+0.2
1,344,434	+		Echvi_1170	0.35	+1.4
1,344,499	+		Echvi_1170	0.50	+2.3
1,344,499	+		Echvi_1170	0.50	+1.8
1,344,500	-		Echvi_1170	0.50	+1.4
1,344,500	-		Echvi_1170	0.50	+1.2
1,344,510	-		Echvi_1170	0.53	+3.0
1,344,572	+		Echvi_1170	0.67	-0.7
1,344,573	-		Echvi_1170	0.67	+2.8
1,344,671	+		Echvi_1170	0.90	-0.1
1,344,672	-				+0.9
1,344,672	-				+2.3
1,344,732	+				+0.6
1,344,761	+				+1.3
1,344,761	+				+0.0
1,344,761	+				-0.8
1,344,761	+				-0.1
1,344,761	+				-0.7
1,344,761	+				-3.4
1,344,761	+				+1.5
1,344,761	+				-1.7
1,344,762	-				+1.0
1,344,762	-				-0.1
1,344,762	-				+1.2
1,344,762	-				-1.4
1,344,762	-				-0.5
1,344,779	+				-0.4
1,344,841	-		Echvi_1171	0.12	+0.2
1,344,887	-		Echvi_1171	0.20	-2.4
1,344,888	+		Echvi_1171	0.20	-0.7
1,344,888	+		Echvi_1171	0.20	-0.5
1,344,889	-		Echvi_1171	0.20	+1.5
1,344,897	-		Echvi_1171	0.21	-1.0
1,344,929	+		Echvi_1171	0.27	+0.3
1,344,929	+		Echvi_1171	0.27	-1.3
1,345,084	+		Echvi_1171	0.53	-1.7
1,345,171	-		Echvi_1171	0.68	+2.5
1,345,201	+		Echvi_1171	0.73	+1.0
1,345,285	-		Echvi_1171	0.87	-0.3
1,345,303	+				-1.1
1,345,304	-				+0.6
1,345,305	+				-1.6
1,345,366	+				-3.8
1,345,366	+				-0.7
1,345,366	+				-1.3
1,345,366	+				+0.4
1,345,367	-				+1.0
1,345,367	-				+1.2
1,345,367	-				-0.9
1,345,379	+				-0.0
1,345,477	+				-1.1
1,345,528	+				-2.6
1,345,707	-				+0.8