Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1156

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,322,520	+				+1.2
1,322,520	+				-1.3
1,322,526	+				-2.8
1,322,527	-				+0.8
1,322,527	-				+0.9
1,322,632	+		Echvi_1154	0.11	+2.2
1,322,638	+		Echvi_1154	0.12	-1.1
1,322,638	+		Echvi_1154	0.12	-1.9
1,322,638	+		Echvi_1154	0.12	+1.3
1,322,638	+		Echvi_1154	0.12	-1.7
1,322,639	-		Echvi_1154	0.12	-2.4
1,322,639	-		Echvi_1154	0.12	-1.3
1,322,639	-		Echvi_1154	0.12	-0.6
1,322,639	-		Echvi_1154	0.12	-0.4
1,322,639	-		Echvi_1154	0.12	-2.0
1,322,651	-		Echvi_1154	0.14	+0.3
1,322,774	+		Echvi_1154	0.32	+1.0
1,322,775	-		Echvi_1154	0.32	-2.2
1,322,817	+		Echvi_1154	0.38	-1.4
1,322,817	+		Echvi_1154	0.38	-1.5
1,322,832	+		Echvi_1154	0.40	-0.7
1,322,833	-		Echvi_1154	0.40	+1.3
1,322,881	-		Echvi_1154	0.47	+1.2
1,322,881	-		Echvi_1154	0.47	+1.4
1,322,957	-		Echvi_1154	0.58	+1.3
1,322,957	-		Echvi_1154	0.58	+3.6
1,322,957	-		Echvi_1154	0.58	-0.8
1,322,962	-		Echvi_1154	0.59	+0.0
1,322,962	-		Echvi_1154	0.59	-2.1
1,322,962	-		Echvi_1154	0.59	-0.4
1,322,988	+		Echvi_1154	0.63	+1.2
1,322,988	+		Echvi_1154	0.63	-3.9
1,322,989	-		Echvi_1154	0.63	-1.4
1,322,989	-		Echvi_1154	0.63	-2.0
1,323,044	-		Echvi_1154	0.71	+0.2
1,323,044	-		Echvi_1154	0.71	+0.2
1,323,073	+		Echvi_1154	0.75	+0.3
1,323,073	+		Echvi_1154	0.75	-2.5
1,323,073	+		Echvi_1154	0.75	-0.3
1,323,074	-		Echvi_1154	0.75	-1.8
1,323,074	-		Echvi_1154	0.75	+0.9
1,323,079	-		Echvi_1154	0.76	+0.4
1,323,079	-		Echvi_1154	0.76	-0.5
1,323,128	+		Echvi_1154	0.83	+2.1
1,323,128	+		Echvi_1154	0.83	+0.2
1,323,128	+		Echvi_1154	0.83	+2.2
1,323,172	+		Echvi_1154	0.90	+1.0
1,323,172	+		Echvi_1154	0.90	-1.3
1,323,174	+		Echvi_1154	0.90	-2.4
1,323,174	+				+1.5
1,323,175	-				-2.3
1,323,200	+				-1.2
1,323,200	+				-2.7
1,323,201	-				+0.7
1,323,228	-				-0.3
1,323,255	+				+0.9
1,323,274	+				+0.7
1,323,274	+				-0.1
1,323,274	+				+1.6
1,323,275	-				-0.8
1,323,275	-				+0.4
1,323,277	+				-1.8
1,323,277	+				-1.2
1,323,277	+				-2.1
1,323,277	+				-0.2
1,323,277	+				-0.2
1,323,278	-				-0.6
1,323,278	-				+0.9
1,323,278	-				+1.2
1,323,278	-				-3.3
1,323,278	-				-0.1
1,323,278	-				-0.5
1,323,285	+				-0.6
1,323,285	+				-2.5
1,323,285	+				-0.7
1,323,296	+		Echvi_1155	0.13	+0.2
1,323,296	+		Echvi_1155	0.13	+1.4
1,323,321	+		Echvi_1155	0.33	-1.0
1,323,351	+		Echvi_1155	0.56	+2.2
1,323,351	+		Echvi_1155	0.56	-0.3
1,323,352	-		Echvi_1155	0.57	+2.1
1,323,352	-		Echvi_1155	0.57	-0.3
1,323,352	-		Echvi_1155	0.57	+0.8
1,323,404	-				+1.4
1,323,481	+				+1.7
1,323,490	+				+0.2
1,323,530	-				+0.2
1,323,530	-				-2.2
1,323,564	-				-1.4
1,323,663	-		Echvi_1156	0.16	-2.5
1,323,672	-		Echvi_1156	0.17	-1.5
1,323,802	-		Echvi_1156	0.28	-1.8
1,323,931	-		Echvi_1156	0.40	-1.5
1,323,961	+		Echvi_1156	0.43	-2.5
1,323,972	+		Echvi_1156	0.44	-1.5
1,323,984	-		Echvi_1156	0.45	-1.7
1,323,993	+		Echvi_1156	0.46	+1.9
1,323,993	+		Echvi_1156	0.46	+1.6
1,323,994	-		Echvi_1156	0.46	-1.0
1,323,995	+		Echvi_1156	0.46	-0.8
1,324,015	+		Echvi_1156	0.48	-3.2
1,324,015	+		Echvi_1156	0.48	-0.8
1,324,016	-		Echvi_1156	0.48	+0.6
1,324,135	+		Echvi_1156	0.58	-2.0
1,324,135	+		Echvi_1156	0.58	-1.4
1,324,136	-		Echvi_1156	0.58	+1.5
1,324,157	-		Echvi_1156	0.60	+0.9
1,324,233	-		Echvi_1156	0.67	+3.5
1,324,271	+		Echvi_1156	0.71	-0.3
1,324,292	-		Echvi_1156	0.73	+2.7
1,324,292	-		Echvi_1156	0.73	-3.6
1,324,304	+		Echvi_1156	0.74	-2.5
1,324,436	+		Echvi_1156	0.86	-2.5
1,324,596	-				-1.2
1,324,607	-				+2.1
1,324,613	+				-0.4
1,324,614	-				-1.3
1,324,619	-				-0.5
1,324,633	-				-0.1
1,324,633	-				-1.2
1,324,633	-				-3.1
1,324,650	-				+0.9
1,324,657	+				-1.4
1,324,658	-				+0.4
1,324,662	-				-2.5
1,324,676	+				+0.0
1,324,690	+				-1.2
1,324,691	-				-0.8
1,324,691	-				-1.5
1,324,691	-				+1.2
1,324,701	+				-3.1
1,324,787	-				-2.1
1,324,810	+				+1.1
1,324,854	+				+2.5
1,324,912	+				+0.8
1,324,912	+				+1.2
1,324,912	+				+0.9
1,324,924	+				+0.5
1,324,925	-				-2.1
1,324,925	-				-2.0
1,324,925	-				+0.2
1,324,925	-				+0.8
1,324,945	+				+0.2
1,324,945	+				+0.1
1,324,945	+				-2.7
1,324,952	-				+1.3
1,325,018	-		Echvi_1157	0.16	-2.6
1,325,021	+		Echvi_1157	0.17	-1.6
1,325,021	+		Echvi_1157	0.17	-1.3
1,325,022	-		Echvi_1157	0.17	+1.7
1,325,022	-		Echvi_1157	0.17	-3.5
1,325,022	-		Echvi_1157	0.17	-3.5
1,325,024	-		Echvi_1157	0.18	+1.5
1,325,077	+		Echvi_1157	0.33	+1.1
1,325,077	+		Echvi_1157	0.33	+1.0
1,325,083	+		Echvi_1157	0.34	-1.1
1,325,104	-		Echvi_1157	0.40	+3.5
1,325,187	-		Echvi_1157	0.63	+0.7
1,325,203	+		Echvi_1157	0.68	-1.2
1,325,204	-		Echvi_1157	0.68	-1.2
1,325,223	+		Echvi_1157	0.73	+0.9
1,325,237	+		Echvi_1157	0.77	-1.9
1,325,402	+				-1.9
1,325,421	-				+2.3
1,325,424	+				-2.7
1,325,449	+				+1.1
1,325,539	-		Echvi_1158	0.15	+1.8
1,325,539	-		Echvi_1158	0.15	+1.0