Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1036

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,197,944	-				-2.4
1,197,944	-				-1.1
1,197,995	-		Echvi_1034	0.15	-2.1
1,198,002	+		Echvi_1034	0.21	+0.4
1,198,020	-		Echvi_1034	0.36	-0.5
1,198,024	+		Echvi_1034	0.39	-1.4
1,198,024	+		Echvi_1034	0.39	+1.7
1,198,033	+		Echvi_1034	0.47	-0.3
1,198,033	+		Echvi_1034	0.47	-0.5
1,198,033	+		Echvi_1034	0.47	+0.0
1,198,033	+		Echvi_1034	0.47	+1.7
1,198,034	-		Echvi_1034	0.47	-1.1
1,198,058	-		Echvi_1034	0.68	+1.5
1,198,088	+				+0.7
1,198,089	-				+0.6
1,198,089	-				-0.7
1,198,089	-				-0.1
1,198,113	+				-0.5
1,198,124	+				+0.6
1,198,145	+				-0.6
1,198,162	+				-0.5
1,198,180	+				+0.9
1,198,180	+				-1.0
1,198,180	+				+0.5
1,198,180	+				-2.0
1,198,181	-				+1.9
1,198,181	-				-1.0
1,198,213	+		Echvi_1035	0.12	-1.5
1,198,213	+		Echvi_1035	0.12	+0.2
1,198,214	-		Echvi_1035	0.12	+0.9
1,198,255	+		Echvi_1035	0.18	+1.5
1,198,256	-		Echvi_1035	0.18	+2.5
1,198,259	+		Echvi_1035	0.18	-2.0
1,198,260	-		Echvi_1035	0.18	-1.4
1,198,260	-		Echvi_1035	0.18	-0.3
1,198,267	+		Echvi_1035	0.19	+0.8
1,198,268	-		Echvi_1035	0.19	+0.7
1,198,268	-		Echvi_1035	0.19	-2.7
1,198,272	+		Echvi_1035	0.20	-2.3
1,198,272	+		Echvi_1035	0.20	+1.0
1,198,272	+		Echvi_1035	0.20	+1.8
1,198,273	-		Echvi_1035	0.20	-3.0
1,198,278	-		Echvi_1035	0.20	+1.1
1,198,306	+		Echvi_1035	0.24	-2.4
1,198,356	+		Echvi_1035	0.30	-1.2
1,198,356	+		Echvi_1035	0.30	+3.3
1,198,357	-		Echvi_1035	0.30	+0.3
1,198,369	+		Echvi_1035	0.31	-2.0
1,198,370	-		Echvi_1035	0.32	-1.2
1,198,436	+		Echvi_1035	0.40	-1.3
1,198,437	-		Echvi_1035	0.40	+1.6
1,198,459	+		Echvi_1035	0.43	+1.8
1,198,459	+		Echvi_1035	0.43	+0.2
1,198,459	+		Echvi_1035	0.43	-0.5
1,198,460	-		Echvi_1035	0.43	-3.4
1,198,460	-		Echvi_1035	0.43	+0.2
1,198,463	+		Echvi_1035	0.43	+0.3
1,198,463	+		Echvi_1035	0.43	-2.4
1,198,463	+		Echvi_1035	0.43	-3.3
1,198,464	-		Echvi_1035	0.43	-1.2
1,198,528	+		Echvi_1035	0.51	-2.1
1,198,529	-		Echvi_1035	0.51	+1.0
1,198,558	+		Echvi_1035	0.55	-0.7
1,198,558	+		Echvi_1035	0.55	-0.3
1,198,611	+		Echvi_1035	0.61	+0.2
1,198,612	-		Echvi_1035	0.61	-0.0
1,198,612	-		Echvi_1035	0.61	-0.1
1,198,638	-		Echvi_1035	0.64	+0.4
1,198,638	-		Echvi_1035	0.64	-0.1
1,198,699	-		Echvi_1035	0.72	-2.0
1,198,738	+		Echvi_1035	0.77	-0.2
1,198,738	+		Echvi_1035	0.77	-2.9
1,198,738	+		Echvi_1035	0.77	+0.9
1,198,771	-		Echvi_1035	0.81	-2.2
1,198,772	+		Echvi_1035	0.81	-1.8
1,198,773	-		Echvi_1035	0.81	-1.8
1,198,773	-		Echvi_1035	0.81	-2.4
1,198,864	+				+1.3
1,198,911	+				+0.5
1,198,911	+				-0.1
1,198,911	+				+2.4
1,198,911	+				-0.8
1,198,913	+				-2.1
1,198,913	+				-2.9
1,198,914	-				-0.2
1,199,009	+		Echvi_1036	0.20	+2.7
1,199,010	-		Echvi_1036	0.20	-2.2
1,199,010	-		Echvi_1036	0.20	-2.0
1,199,010	-		Echvi_1036	0.20	-1.5
1,199,011	+		Echvi_1036	0.21	-0.8
1,199,011	+		Echvi_1036	0.21	+0.5
1,199,011	+		Echvi_1036	0.21	+0.5
1,199,053	+		Echvi_1036	0.30	-1.2
1,199,053	+		Echvi_1036	0.30	-2.3
1,199,054	-		Echvi_1036	0.30	+0.2
1,199,058	+		Echvi_1036	0.31	+0.9
1,199,059	-		Echvi_1036	0.32	-1.2
1,199,059	-		Echvi_1036	0.32	-2.4
1,199,061	-		Echvi_1036	0.32	-0.4
1,199,061	-		Echvi_1036	0.32	-1.7
1,199,061	-		Echvi_1036	0.32	-2.0
1,199,069	+		Echvi_1036	0.34	+2.3
1,199,069	+		Echvi_1036	0.34	-2.1
1,199,069	+		Echvi_1036	0.34	-1.9
1,199,070	-		Echvi_1036	0.34	+1.6
1,199,070	-		Echvi_1036	0.34	-1.0
1,199,070	-		Echvi_1036	0.34	-1.6
1,199,149	-		Echvi_1036	0.52	+1.8
1,199,172	+		Echvi_1036	0.57	-1.0
1,199,172	+		Echvi_1036	0.57	-0.8
1,199,192	+		Echvi_1036	0.62	-1.3
1,199,192	+		Echvi_1036	0.62	+0.8
1,199,193	-		Echvi_1036	0.62	+0.9
1,199,216	+		Echvi_1036	0.67	+0.2
1,199,257	+		Echvi_1036	0.77	+0.9
1,199,258	-		Echvi_1036	0.77	-1.6
1,199,291	+		Echvi_1036	0.84	-0.6
1,199,291	+		Echvi_1036	0.84	-1.2
1,199,296	-		Echvi_1036	0.86	+1.1
1,199,333	+				+0.9
1,199,333	+				-2.7
1,199,334	-				-1.3
1,199,343	+				+0.9
1,199,353	+				+0.1
1,199,353	+				-2.7
1,199,353	+				+0.9
1,199,353	+				-0.1
1,199,353	+				+0.7
1,199,353	+				-0.0
1,199,353	+				+0.2
1,199,353	+				-0.3
1,199,354	-				-1.3
1,199,354	-				-2.9
1,199,354	-				+1.1
1,199,354	-				+2.9
1,199,354	-				-1.0
1,199,354	-				-0.8
1,199,354	-				-0.8
1,199,358	+				-0.7
1,199,358	+				+0.1
1,199,358	+				-3.1
1,199,358	+				+0.5
1,199,358	+				+1.0
1,199,359	-				+1.4
1,199,368	+				+3.0
1,199,368	+				+0.6
1,199,368	+				+0.9
1,199,368	+				-0.5
1,199,369	-				-1.6
1,199,369	-				-1.0
1,199,369	-				-2.7
1,199,369	-				+1.8
1,199,369	-				-2.4
1,199,372	+				+1.8
1,199,373	-				-1.1
1,199,402	+		Echvi_1037	0.11	-0.9
1,199,403	-		Echvi_1037	0.11	-0.5
1,199,456	-		Echvi_1037	0.23	-1.4
1,199,487	+		Echvi_1037	0.31	-1.0
1,199,496	+		Echvi_1037	0.33	+1.3
1,199,496	+		Echvi_1037	0.33	-1.0
1,199,553	-		Echvi_1037	0.46	-0.5
1,199,557	+		Echvi_1037	0.47	-1.1
1,199,583	+		Echvi_1037	0.53	-1.0
1,199,583	+		Echvi_1037	0.53	-2.0
1,199,584	-		Echvi_1037	0.53	-0.3
1,199,584	-		Echvi_1037	0.53	-1.8
1,199,584	-		Echvi_1037	0.53	-2.3
1,199,584	-		Echvi_1037	0.53	-1.0
1,199,655	+		Echvi_1037	0.69	+2.0
1,199,655	+		Echvi_1037	0.69	+1.8
1,199,655	+		Echvi_1037	0.69	+1.2
1,199,656	-		Echvi_1037	0.70	-2.4
1,199,656	-		Echvi_1037	0.70	-0.8
1,199,656	-		Echvi_1037	0.70	-0.7
1,199,661	-		Echvi_1037	0.71	-1.9
1,199,699	-		Echvi_1037	0.80	+0.6
1,199,699	-		Echvi_1037	0.80	-0.3
1,199,737	-		Echvi_1037	0.88	-0.4
1,199,744	+				+2.1
1,199,745	-				-0.5
1,199,745	-				-1.2
1,199,746	+				+1.9
1,199,746	+				-3.0
1,199,747	-				-1.4
1,199,747	-				+0.7
1,199,747	-				+1.4
1,199,747	-				-0.1
1,199,753	+				-0.3
1,199,857	+		Echvi_1038	0.28	-0.2
1,199,857	+		Echvi_1038	0.28	+1.6
1,199,858	-		Echvi_1038	0.28	-1.5
1,199,872	-		Echvi_1038	0.32	+0.2
1,199,913	+		Echvi_1038	0.43	+1.1
1,199,914	-		Echvi_1038	0.44	-3.2
1,199,914	-		Echvi_1038	0.44	-2.1
1,199,922	+		Echvi_1038	0.46	+1.7
1,199,952	+		Echvi_1038	0.54	+2.3
1,199,952	+		Echvi_1038	0.54	+0.7
1,199,953	-		Echvi_1038	0.54	+0.5
1,199,953	-		Echvi_1038	0.54	-1.0
1,200,109	-				+4.9
1,200,109	-				+2.5
1,200,109	-				-3.2
1,200,123	+				-1.5
1,200,139	-				-0.1
1,200,139	-				+0.1
1,200,139	-				+1.1
1,200,139	-				-1.0
1,200,142	+				-1.2
1,200,143	-				+1.3
1,200,158	+				-1.0
1,200,158	+				-0.2
1,200,159	-				-0.7
1,200,165	-				-1.2
1,200,171	+				-2.8
1,200,171	+				-1.6
1,200,171	+				+0.0
1,200,171	+				-0.9
1,200,172	-				-1.2
1,200,172	-				+1.7
1,200,172	-				+1.3
1,200,172	-				+1.6
1,200,172	-				+1.9
1,200,172	-				-1.2
1,200,175	+				-1.2
1,200,175	+				-0.5
1,200,175	+				+1.6
1,200,175	+				+0.9
1,200,175	+				+0.4
1,200,175	+				-2.2
1,200,176	-				+1.0
1,200,186	+				+1.9
1,200,186	+				-1.0
1,200,186	+				+0.1
1,200,186	+				-0.2
1,200,186	+				-0.1
1,200,186	+				-2.8
1,200,187	-				-0.1
1,200,187	-				+2.4
1,200,187	-				-1.1
1,200,187	-				+3.0
1,200,188	+				-2.0
1,200,188	+				+2.1
1,200,188	+				-2.5
1,200,189	-				-1.2
1,200,189	-				-0.7
1,200,189	-				+1.7
1,200,189	-				+2.2
1,200,189	-				+2.5
1,200,189	-				+0.7
1,200,189	-				+0.1
1,200,259	-				+1.2
1,200,261	+				-0.8
1,200,261	+				+0.8
1,200,261	+				-0.4
1,200,261	+				+3.7
1,200,261	+				+0.4
1,200,261	+				+1.7
1,200,262	-				-0.5
1,200,262	-				+1.5
1,200,262	-				-0.5
1,200,262	-				+1.4
1,200,262	-				+0.2
1,200,262	-				+0.6
1,200,262	-				+2.1
1,200,263	+				+0.9
1,200,263	+				+0.7
1,200,263	+				+2.0
1,200,263	+				+1.5
1,200,263	+				-3.5
1,200,263	+				+1.3
1,200,263	+				-1.4
1,200,264	-				-0.2
1,200,264	-				-2.8
1,200,264	-				+2.5
1,200,264	-				+0.4
1,200,264	-				+1.7
1,200,264	-				+1.7
1,200,264	-				+2.6
1,200,264	-				+1.0
1,200,265	-				+0.2
1,200,266	+				-3.1
1,200,266	+				+0.5
1,200,268	+				-2.3
1,200,269	-				+3.3
1,200,269	-				-0.0
1,200,269	-				+2.8
1,200,269	-				+1.0
1,200,313	+				-1.4
1,200,313	+				-3.0
1,200,314	-				-1.0
1,200,314	-				+0.1
1,200,314	-				+1.4
1,200,341	-				+1.2