Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1025

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,186,578	+		Echvi_1023	0.78	-2.1
1,186,596	-				+0.6
1,186,607	-				+0.7
1,186,610	+				+0.5
1,186,620	+				+0.6
1,186,620	+				+0.5
1,186,620	+				+2.7
1,186,620	+				+0.2
1,186,620	+				+1.6
1,186,621	-				-1.8
1,186,621	-				-1.3
1,186,621	-				+1.5
1,186,630	+				+2.1
1,186,638	+				+1.6
1,186,638	+				-3.8
1,186,685	+				+0.1
1,186,686	-				-1.2
1,186,698	-				+1.3
1,186,707	-				-1.3
1,186,857	+		Echvi_1024	0.14	-0.5
1,186,857	+		Echvi_1024	0.14	-0.1
1,186,862	+		Echvi_1024	0.15	-0.5
1,186,863	-		Echvi_1024	0.15	-2.0
1,186,897	-		Echvi_1024	0.20	-2.6
1,186,933	-		Echvi_1024	0.26	-2.6
1,186,933	-				+0.9
1,186,959	+		Echvi_1024	0.29	-0.1
1,186,960	-		Echvi_1024	0.30	-0.5
1,186,965	+		Echvi_1024	0.30	+0.9
1,186,967	+		Echvi_1024	0.31	-0.7
1,186,967	+		Echvi_1024	0.31	-1.8
1,186,967	+		Echvi_1024	0.31	+2.0
1,186,967	+		Echvi_1024	0.31	+0.1
1,186,967	+		Echvi_1024	0.31	-0.7
1,186,971	+		Echvi_1024	0.31	+1.0
1,186,972	-		Echvi_1024	0.31	-0.7
1,186,972	-		Echvi_1024	0.31	+1.0
1,187,007	+		Echvi_1024	0.37	+0.2
1,187,036	+		Echvi_1024	0.41	+2.8
1,187,036	+		Echvi_1024	0.41	-0.3
1,187,036	+		Echvi_1024	0.41	-2.4
1,187,057	+		Echvi_1024	0.44	+0.0
1,187,069	+		Echvi_1024	0.46	+2.2
1,187,106	+		Echvi_1024	0.51	+0.5
1,187,121	+		Echvi_1024	0.53	+1.8
1,187,122	-		Echvi_1024	0.54	+1.9
1,187,177	+		Echvi_1024	0.62	+0.1
1,187,226	+		Echvi_1024	0.69	-2.5
1,187,357	+		Echvi_1024	0.88	+1.0
1,187,446	+				+3.5
1,187,447	-				-0.7
1,187,516	+				-1.6
1,187,533	+				-1.0
1,187,533	+				+2.5
1,187,612	+		Echvi_1025	0.12	+1.2
1,187,612	+		Echvi_1025	0.12	-0.8
1,187,612	+		Echvi_1025	0.12	+1.5
1,187,613	-		Echvi_1025	0.12	-0.5
1,187,613	-		Echvi_1025	0.12	-1.3
1,187,613	-		Echvi_1025	0.12	-1.8
1,187,619	+		Echvi_1025	0.14	-0.6
1,187,619	+		Echvi_1025	0.14	-1.9
1,187,619	+		Echvi_1025	0.14	+0.8
1,187,619	+		Echvi_1025	0.14	-2.4
1,187,620	-		Echvi_1025	0.14	-1.4
1,187,620	-		Echvi_1025	0.14	-1.4
1,187,620	-		Echvi_1025	0.14	-1.4
1,187,663	+		Echvi_1025	0.22	+0.3
1,187,663	+		Echvi_1025	0.22	-1.1
1,187,663	+		Echvi_1025	0.22	-1.5
1,187,664	-		Echvi_1025	0.22	-0.1
1,187,697	+		Echvi_1025	0.28	-2.3
1,187,697	+		Echvi_1025	0.28	-2.6
1,187,801	+		Echvi_1025	0.47	-1.0
1,187,804	+		Echvi_1025	0.47	+0.3
1,187,814	+		Echvi_1025	0.49	+0.5
1,187,815	-		Echvi_1025	0.49	-2.2
1,187,888	-		Echvi_1025	0.63	+0.2
1,187,888	-		Echvi_1025	0.63	-0.3
1,187,989	+		Echvi_1025	0.81	-1.0
1,187,990	-		Echvi_1025	0.82	+0.9
1,187,992	-		Echvi_1025	0.82	+0.2
1,187,992	-		Echvi_1025	0.82	-0.8
1,187,992	-		Echvi_1025	0.82	-1.3
1,187,992	-		Echvi_1025	0.82	+1.6
1,188,031	+		Echvi_1025	0.89	-2.5
1,188,032	-		Echvi_1025	0.89	+0.9
1,188,034	-		Echvi_1025	0.90	-1.1
1,188,065	-				+3.5
1,188,090	+				+0.4
1,188,095	+				+2.6
1,188,095	+				+0.7
1,188,096	-				+0.5
1,188,145	-				-0.3
1,188,160	-				+2.7
1,188,170	+				-2.4
1,188,177	+				-0.4
1,188,178	-				-3.4
1,188,187	+				-2.5
1,188,187	+				+1.6
1,188,218	+				+3.0
1,188,218	+				-0.2
1,188,278	+				-0.3
1,188,373	+				+1.3
1,188,373	+				-0.1
1,188,374	-		Echvi_1026	0.10	-0.7
1,188,432	+		Echvi_1026	0.18	-1.6
1,188,581	+		Echvi_1026	0.40	+0.3
1,188,659	+		Echvi_1026	0.52	-0.5
1,188,659	+		Echvi_1026	0.52	+2.8
1,188,660	-		Echvi_1026	0.52	+2.0
1,188,660	-		Echvi_1026	0.52	+2.6
1,188,660	-		Echvi_1026	0.52	-1.7
1,188,686	+		Echvi_1026	0.55	-0.1
1,188,686	+		Echvi_1026	0.55	+0.5
1,188,698	-		Echvi_1026	0.57	+0.7
1,188,853	+		Echvi_1026	0.80	+1.2
1,188,854	-		Echvi_1026	0.80	-2.3
1,188,854	-		Echvi_1026	0.80	+1.8
1,188,883	+		Echvi_1026	0.84	+1.0
1,188,883	+		Echvi_1026	0.84	+0.1
1,188,900	+		Echvi_1026	0.87	+0.5
1,188,900	+		Echvi_1026	0.87	+0.5
1,188,901	-		Echvi_1026	0.87	+1.8
1,188,901	-		Echvi_1026	0.87	-2.3
1,188,901	-		Echvi_1026	0.87	+0.3
1,188,971	+				+2.3
1,188,972	-				+0.9
1,188,972	-				+0.5
1,188,992	-				-1.0
1,188,992	-				-1.0
1,188,992	-				-0.3
1,188,996	+				-2.9
1,189,010	+				-0.6
1,189,011	-				+0.3
1,189,013	-				+1.0
1,189,013	-				-0.1
1,189,019	+				+3.1
1,189,039	-				-1.9
1,189,044	+				-1.4
1,189,044	+				-0.1
1,189,044	+				-0.7
1,189,044	+				+0.1
1,189,045	-				-0.6
1,189,045	-				-1.0
1,189,065	+				+1.9
1,189,065	+				-0.1