Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0956

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,104,999	-		Echvi_0955	0.82	-2.6
1,104,999	-		Echvi_0955	0.82	+2.3
1,105,020	-		Echvi_0955	0.83	+0.9
1,105,020	-		Echvi_0955	0.83	-1.2
1,105,043	-		Echvi_0955	0.84	-2.2
1,105,043	-		Echvi_0955	0.84	+0.3
1,105,136	-		Echvi_0955	0.87	-3.0
1,105,136	-		Echvi_0955	0.87	+5.0
1,105,136	-		Echvi_0955	0.87	+1.3
1,105,243	+				+3.5
1,105,290	+				+1.7
1,105,290	+				-0.7
1,105,290	+				+1.3
1,105,291	-				-0.5
1,105,291	-				-0.7
1,105,291	-				+1.5
1,105,291	-				+1.5
1,105,291	-				+0.6
1,105,309	+				+2.0
1,105,323	+				+0.1
1,105,324	-				+3.5
1,105,325	+				-1.9
1,105,332	+				+2.2
1,105,338	+				-2.4
1,105,338	+				-2.7
1,105,339	-				+0.6
1,105,342	+				+1.6
1,105,342	+				+1.9
1,105,343	-				-2.6
1,105,343	-				+0.6
1,105,351	-				+1.8
1,105,351	-				-2.2
1,105,366	+				+1.7
1,105,366	+				-0.7
1,105,366	+				+1.4
1,105,366	+				-0.0
1,105,372	+				+0.5
1,105,372	+				+1.7
1,105,372	+				+1.3
1,105,372	+				+0.4
1,105,372	+				+1.9
1,105,372	+				+1.7
1,105,372	+				-1.9
1,105,373	-				-0.8
1,105,373	-				+0.7
1,105,373	-				+1.5
1,105,377	+				+0.0
1,105,377	+				+0.2
1,105,378	-				-0.8
1,105,379	+				+0.6
1,105,379	+				+1.8
1,105,380	-				+0.7
1,105,380	-				+0.6
1,105,380	-				-2.8
1,105,380	-				+0.7
1,105,380	-				+1.9
1,105,424	-				-1.5
1,105,424	-				+2.7
1,105,430	-				+1.0
1,105,516	-				+0.6
1,105,529	-				+1.7
1,105,541	-				+3.3
1,105,645	-				+0.2
1,105,715	+				+0.8
1,105,739	+				-1.0
1,105,888	+				-0.4
1,105,889	-				+2.4
1,105,892	+				-1.4
1,105,892	+				+1.9
1,105,893	-				-2.1
1,105,938	+				+0.7
1,105,938	+				+0.2
1,105,938	+				+1.6
1,105,939	-				-0.1
1,105,940	+				-2.6
1,105,940	+				-0.5
1,105,940	+				+0.8
1,105,941	-				+2.9
1,105,941	-				-0.1
1,105,941	-				+0.4
1,105,941	-				-1.0
1,105,941	-				+1.1
1,105,941	-				+0.9
1,105,944	+				-1.1
1,105,944	+				-0.7
1,105,945	-				-1.1
1,105,945	-				-1.3
1,105,947	-				+0.9
1,105,962	+				-3.6
1,105,964	+				+1.9
1,105,965	-				+2.1
1,106,065	+				-2.2
1,106,065	+				-0.3
1,106,065	+				+3.0
1,106,065	+				-1.0
1,106,065	+				+1.1
1,106,066	-				+1.4
1,106,066	-				-1.7
1,106,066	-				-0.5
1,106,067	+				-0.7
1,106,067	+				-1.7
1,106,067	+				-0.3
1,106,067	+				+1.9
1,106,067	+				-0.8
1,106,067	+				+0.1
1,106,067	+				+2.7
1,106,068	-				+1.3
1,106,068	-				+1.9
1,106,068	-				-0.7
1,106,068	-				+0.2
1,106,068	-				+1.9
1,106,068	-				-0.9
1,106,086	+				+1.1
1,106,086	+				-0.7
1,106,086	+				-1.4
1,106,086	+				-1.0
1,106,087	-				+1.1
1,106,087	-				-0.7
1,106,122	+		Echvi_0956	0.12	+1.3
1,106,122	+		Echvi_0956	0.12	-1.3
1,106,209	+		Echvi_0956	0.21	+0.2
1,106,285	+		Echvi_0956	0.28	+1.6
1,106,520	+		Echvi_0956	0.51	+1.4
1,106,520	+		Echvi_0956	0.51	-1.0
1,106,520	+		Echvi_0956	0.51	+1.2
1,106,521	-		Echvi_0956	0.51	-1.1
1,106,620	+		Echvi_0956	0.61	+1.4
1,106,620	+		Echvi_0956	0.61	+0.4
1,106,621	-		Echvi_0956	0.61	+0.6
1,106,641	+		Echvi_0956	0.63	-1.6
1,106,642	-		Echvi_0956	0.63	-1.8
1,106,642	-		Echvi_0956	0.63	+1.5
1,106,642	-		Echvi_0956	0.63	+0.6
1,106,642	-		Echvi_0956	0.63	+0.7
1,106,707	-		Echvi_0956	0.70	+0.2
1,106,707	-		Echvi_0956	0.70	-1.1
1,106,707	-		Echvi_0956	0.70	+1.6
1,106,714	+		Echvi_0956	0.70	+0.8
1,106,714	+		Echvi_0956	0.70	+1.7
1,106,714	+		Echvi_0956	0.70	+0.7
1,106,715	-		Echvi_0956	0.70	+3.1
1,106,719	-		Echvi_0956	0.71	+0.2
1,106,791	+		Echvi_0956	0.78	-4.5
1,106,802	-		Echvi_0956	0.79	+2.6
1,106,802	-		Echvi_0956	0.79	+1.3
1,106,828	+		Echvi_0956	0.81	+0.5
1,106,828	+		Echvi_0956	0.81	+0.7
1,106,828	+		Echvi_0956	0.81	+0.6
1,106,829	-		Echvi_0956	0.82	+2.6
1,106,829	-		Echvi_0956	0.82	+1.3
1,106,829	-		Echvi_0956	0.82	+1.5
1,106,882	-		Echvi_0956	0.87	+2.3
1,106,923	-				-0.8
1,106,927	+				-2.1
1,106,934	-				-2.0
1,106,992	+				-1.2
1,106,992	+				-0.8
1,106,992	+				-0.3
1,107,057	+				-0.1
1,107,057	+				+1.6
1,107,057	+				-0.5
1,107,058	-				+0.5
1,107,058	-				+1.0
1,107,058	-				+2.1
1,107,058	-				-1.3
1,107,145	-		Echvi_0957	0.12	-0.5
1,107,194	+		Echvi_0957	0.22	-1.5
1,107,195	-		Echvi_0957	0.22	-1.6
1,107,195	-		Echvi_0957	0.22	-0.8
1,107,195	-		Echvi_0957	0.22	+0.2
1,107,195	-		Echvi_0957	0.22	-1.3
1,107,195	-		Echvi_0957	0.22	+2.2
1,107,265	-		Echvi_0957	0.35	-1.4
1,107,301	-		Echvi_0957	0.42	+1.0
1,107,327	+		Echvi_0957	0.46	+0.8
1,107,328	-		Echvi_0957	0.47	+2.0
1,107,328	-		Echvi_0957	0.47	+1.2
1,107,328	-		Echvi_0957	0.47	+0.5
1,107,329	+		Echvi_0957	0.47	-1.8
1,107,329	+		Echvi_0957	0.47	+2.9
1,107,330	-		Echvi_0957	0.47	-2.3
1,107,389	+		Echvi_0957	0.58	+3.7
1,107,389	+		Echvi_0957	0.58	+1.2
1,107,389	+		Echvi_0957	0.58	+0.2
1,107,389	+		Echvi_0957	0.58	+0.8
1,107,390	-		Echvi_0957	0.58	+0.1
1,107,390	-		Echvi_0957	0.58	-1.8
1,107,390	-		Echvi_0957	0.58	-3.8
1,107,417	-		Echvi_0957	0.63	+1.2
1,107,420	+		Echvi_0957	0.64	+3.3
1,107,420	+		Echvi_0957	0.64	-0.3
1,107,420	+		Echvi_0957	0.64	-0.5
1,107,420	+		Echvi_0957	0.64	-0.5
1,107,421	-		Echvi_0957	0.64	-3.3
1,107,421	-		Echvi_0957	0.64	+1.2
1,107,421	-		Echvi_0957	0.64	+1.1
1,107,421	-		Echvi_0957	0.64	-1.3
1,107,431	+		Echvi_0957	0.66	+2.0
1,107,431	+		Echvi_0957	0.66	+0.3
1,107,431	+		Echvi_0957	0.66	+0.6
1,107,431	+		Echvi_0957	0.66	+1.5
1,107,432	-		Echvi_0957	0.66	+1.4
1,107,432	-		Echvi_0957	0.66	-1.8
1,107,432	-		Echvi_0957	0.66	+0.2
1,107,432	-		Echvi_0957	0.66	+0.2
1,107,432	-		Echvi_0957	0.66	-0.1
1,107,432	-		Echvi_0957	0.66	-0.8
1,107,432	-		Echvi_0957	0.66	+1.9
1,107,432	-		Echvi_0957	0.66	+1.2
1,107,432	-		Echvi_0957	0.66	-1.2
1,107,464	+		Echvi_0957	0.72	+0.5
1,107,464	+		Echvi_0957	0.72	-1.3
1,107,464	+		Echvi_0957	0.72	+2.6
1,107,464	+		Echvi_0957	0.72	+0.3
1,107,464	+		Echvi_0957	0.72	-1.2
1,107,465	-		Echvi_0957	0.72	-1.2
1,107,465	-		Echvi_0957	0.72	-1.9
1,107,465	-		Echvi_0957	0.72	+0.0
1,107,470	+		Echvi_0957	0.73	+1.1
1,107,485	-		Echvi_0957	0.76	+0.8
1,107,510	-		Echvi_0957	0.81	+2.1
1,107,510	-		Echvi_0957	0.81	-1.2
1,107,513	+		Echvi_0957	0.81	+1.1
1,107,535	+		Echvi_0957	0.85	-2.6
1,107,535	+		Echvi_0957	0.85	+0.2
1,107,535	+		Echvi_0957	0.85	+1.5
1,107,536	-		Echvi_0957	0.86	-0.4
1,107,638	+				+1.5
1,107,638	+				-1.4
1,107,711	-				-2.4
1,107,712	+				+1.4
1,107,712	+				+1.0
1,107,713	-				-1.3
1,107,734	-				+0.2
1,107,794	+		Echvi_0958	0.11	+2.3
1,107,794	+		Echvi_0958	0.11	+1.3
1,107,794	+		Echvi_0958	0.11	+1.2
1,107,795	-		Echvi_0958	0.11	+1.5
1,107,833	-		Echvi_0958	0.15	-0.1
1,107,842	-		Echvi_0958	0.16	+1.6
1,107,842	-		Echvi_0958	0.16	+1.6
1,107,842	-		Echvi_0958	0.16	-1.3
1,107,880	-		Echvi_0958	0.19	-2.8
1,107,880	-		Echvi_0958	0.19	-2.7
1,107,883	-		Echvi_0958	0.19	+1.8
1,107,903	+		Echvi_0958	0.21	-1.6
1,107,903	+		Echvi_0958	0.21	-0.4
1,107,904	-		Echvi_0958	0.21	-0.1
1,107,904	-		Echvi_0958	0.21	-1.6
1,107,928	+		Echvi_0958	0.23	-2.3
1,107,938	-		Echvi_0958	0.24	+0.8
1,108,006	+		Echvi_0958	0.30	-2.7
1,108,006	+		Echvi_0958	0.30	+0.1
1,108,006	+		Echvi_0958	0.30	+1.4
1,108,006	+		Echvi_0958	0.30	+1.3
1,108,007	-		Echvi_0958	0.30	-1.8
1,108,007	-		Echvi_0958	0.30	-1.8
1,108,013	+		Echvi_0958	0.31	+2.0
1,108,013	+		Echvi_0958	0.31	+0.5
1,108,014	-		Echvi_0958	0.31	-1.2
1,108,014	-		Echvi_0958	0.31	+2.4
1,108,014	-		Echvi_0958	0.31	-2.8