Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0651 and Echvi_0652 are separated by 137 nucleotides Echvi_0652 and Echvi_0653 are separated by 3 nucleotides
Echvi_0651: Echvi_0651 - Outer membrane protein, at 735,190 to 735,750
_0651
Echvi_0652: Echvi_0652 - Outer membrane protein, at 735,888 to 736,436
_0652
Echvi_0653: Echvi_0653 - Outer membrane protein/protective antigen OMA87, at 736,440 to 739,154
_0653
Position (kb)
735
736
737 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 734.917 kb on + strand at 734.926 kb on + strand at 734.926 kb on + strand at 734.926 kb on + strand at 734.927 kb on - strand at 734.929 kb on + strand at 734.930 kb on - strand at 734.930 kb on - strand at 734.930 kb on - strand at 734.940 kb on + strand at 734.980 kb on + strand at 734.980 kb on + strand at 734.980 kb on + strand at 734.981 kb on - strand at 734.981 kb on - strand at 734.991 kb on - strand at 734.991 kb on - strand at 735.032 kb on + strand at 735.032 kb on + strand at 735.032 kb on + strand at 735.032 kb on + strand at 735.033 kb on - strand at 735.039 kb on + strand at 735.039 kb on + strand at 735.040 kb on - strand at 735.043 kb on + strand at 735.055 kb on + strand at 735.055 kb on + strand at 735.061 kb on - strand at 735.175 kb on + strand at 735.772 kb on - strand at 735.981 kb on - strand, within Echvi_0652 at 735.983 kb on - strand, within Echvi_0652 at 735.983 kb on - strand, within Echvi_0652 at 736.008 kb on - strand, within Echvi_0652 at 736.017 kb on - strand, within Echvi_0652 at 736.106 kb on - strand, within Echvi_0652 at 736.106 kb on - strand, within Echvi_0652 at 736.109 kb on - strand, within Echvi_0652 at 736.120 kb on - strand, within Echvi_0652 at 736.142 kb on - strand, within Echvi_0652 at 736.146 kb on - strand, within Echvi_0652 at 736.193 kb on - strand, within Echvi_0652 at 736.193 kb on - strand, within Echvi_0652 at 736.193 kb on - strand, within Echvi_0652 at 736.193 kb on - strand, within Echvi_0652 at 736.238 kb on - strand, within Echvi_0652 at 736.238 kb on - strand, within Echvi_0652 at 736.238 kb on - strand, within Echvi_0652 at 736.238 kb on - strand, within Echvi_0652 at 736.301 kb on + strand, within Echvi_0652 at 736.341 kb on + strand, within Echvi_0652 at 736.342 kb on - strand, within Echvi_0652 at 736.349 kb on - strand, within Echvi_0652 at 736.417 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 734,917 + +1.5 734,926 + +2.5 734,926 + -2.2 734,926 + -3.7 734,927 - -0.8 734,929 + +0.4 734,930 - -2.7 734,930 - -2.0 734,930 - -1.3 734,940 + -1.4 734,980 + +1.2 734,980 + -0.5 734,980 + -1.4 734,981 - +1.5 734,981 - -1.1 734,991 - -2.4 734,991 - -0.8 735,032 + +1.4 735,032 + +1.0 735,032 + +0.9 735,032 + -2.4 735,033 - -1.3 735,039 + +2.2 735,039 + -1.0 735,040 - -1.2 735,043 + -3.2 735,055 + -0.6 735,055 + -1.0 735,061 - -1.9 735,175 + -0.2 735,772 - +2.3 735,981 - Echvi_0652 0.17 +1.6 735,983 - Echvi_0652 0.17 +2.5 735,983 - Echvi_0652 0.17 +2.4 736,008 - Echvi_0652 0.22 -1.7 736,017 - Echvi_0652 0.23 +2.7 736,106 - Echvi_0652 0.40 +4.9 736,106 - Echvi_0652 0.40 +1.6 736,109 - Echvi_0652 0.40 +2.5 736,120 - Echvi_0652 0.42 +0.9 736,142 - Echvi_0652 0.46 +1.7 736,146 - Echvi_0652 0.47 +1.8 736,193 - Echvi_0652 0.56 +2.1 736,193 - Echvi_0652 0.56 +2.2 736,193 - Echvi_0652 0.56 +1.5 736,193 - Echvi_0652 0.56 +3.0 736,238 - Echvi_0652 0.64 +1.5 736,238 - Echvi_0652 0.64 +2.1 736,238 - Echvi_0652 0.64 +2.4 736,238 - Echvi_0652 0.64 +2.2 736,301 + Echvi_0652 0.75 +3.4 736,341 + Echvi_0652 0.83 +1.8 736,342 - Echvi_0652 0.83 +2.8 736,349 - Echvi_0652 0.84 +1.7 736,417 - +1.8
Or see this region's nucleotide sequence