Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0589 and Echvi_0590 are separated by 152 nucleotides Echvi_0590 and Echvi_0591 are separated by 6 nucleotides Echvi_0591 and Echvi_0592 are separated by 75 nucleotides
Echvi_0589: Echvi_0589 - hypothetical protein, at 667,106 to 667,942
_0589
Echvi_0590: Echvi_0590 - DnaJ-class molecular chaperone with C-terminal Zn finger domain, at 668,095 to 669,210
_0590
Echvi_0591: Echvi_0591 - Molecular chaperone GrpE (heat shock protein), at 669,217 to 669,837
_0591
Echvi_0592: Echvi_0592 - Obg family GTPase CgtA, at 669,913 to 670,905
_0592
Position (kb) 668
669
670 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 667.107 kb on + strand at 667.112 kb on + strand at 667.134 kb on - strand at 667.269 kb on + strand, within Echvi_0589 at 667.297 kb on + strand, within Echvi_0589 at 667.297 kb on + strand, within Echvi_0589 at 667.298 kb on - strand, within Echvi_0589 at 667.299 kb on + strand, within Echvi_0589 at 667.302 kb on - strand, within Echvi_0589 at 667.387 kb on - strand, within Echvi_0589 at 667.406 kb on - strand, within Echvi_0589 at 667.521 kb on - strand, within Echvi_0589 at 667.532 kb on - strand, within Echvi_0589 at 667.623 kb on + strand, within Echvi_0589 at 667.624 kb on - strand, within Echvi_0589 at 667.624 kb on - strand, within Echvi_0589 at 667.624 kb on - strand, within Echvi_0589 at 667.628 kb on - strand, within Echvi_0589 at 667.735 kb on + strand, within Echvi_0589 at 667.760 kb on - strand, within Echvi_0589 at 667.770 kb on + strand, within Echvi_0589 at 667.789 kb on + strand, within Echvi_0589 at 667.790 kb on - strand, within Echvi_0589 at 667.866 kb on + strand at 667.867 kb on - strand at 667.947 kb on - strand at 667.947 kb on - strand at 667.966 kb on + strand at 667.967 kb on - strand at 667.980 kb on - strand at 667.999 kb on + strand at 668.000 kb on - strand at 668.000 kb on - strand at 668.011 kb on - strand at 668.075 kb on + strand at 668.081 kb on + strand at 668.081 kb on + strand at 668.081 kb on + strand at 668.081 kb on + strand at 668.081 kb on + strand at 668.081 kb on + strand at 668.081 kb on + strand at 668.081 kb on + strand at 668.081 kb on + strand at 668.082 kb on - strand at 668.082 kb on - strand at 668.366 kb on - strand, within Echvi_0590 at 668.402 kb on + strand, within Echvi_0590 at 668.403 kb on - strand at 668.411 kb on + strand, within Echvi_0590 at 668.411 kb on + strand, within Echvi_0590 at 668.443 kb on - strand, within Echvi_0590 at 669.211 kb on - strand at 669.214 kb on - strand at 669.214 kb on - strand at 669.219 kb on - strand at 669.770 kb on - strand, within Echvi_0591 at 669.770 kb on - strand, within Echvi_0591 at 669.770 kb on - strand, within Echvi_0591 at 669.805 kb on - strand at 669.805 kb on - strand at 669.805 kb on - strand at 669.823 kb on - strand at 669.838 kb on - strand at 669.838 kb on - strand at 669.838 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 667,107 + +1.9 667,112 + +1.1 667,134 - +1.8 667,269 + Echvi_0589 0.19 +1.8 667,297 + Echvi_0589 0.23 +1.7 667,297 + Echvi_0589 0.23 +3.3 667,298 - Echvi_0589 0.23 +0.2 667,299 + Echvi_0589 0.23 +2.3 667,302 - Echvi_0589 0.23 +2.5 667,387 - Echvi_0589 0.34 +2.3 667,406 - Echvi_0589 0.36 +2.2 667,521 - Echvi_0589 0.50 +0.2 667,532 - Echvi_0589 0.51 +1.8 667,623 + Echvi_0589 0.62 +2.3 667,624 - Echvi_0589 0.62 +3.2 667,624 - Echvi_0589 0.62 +2.2 667,624 - Echvi_0589 0.62 +0.6 667,628 - Echvi_0589 0.62 +0.3 667,735 + Echvi_0589 0.75 +1.9 667,760 - Echvi_0589 0.78 +1.3 667,770 + Echvi_0589 0.79 -0.1 667,789 + Echvi_0589 0.82 +0.9 667,790 - Echvi_0589 0.82 -0.1 667,866 + +3.3 667,867 - +0.5 667,947 - +0.5 667,947 - +2.6 667,966 + +1.8 667,967 - +1.1 667,980 - +2.0 667,999 + +3.4 668,000 - +2.8 668,000 - -1.6 668,011 - +0.5 668,075 + -0.2 668,081 + -0.6 668,081 + -0.3 668,081 + +2.1 668,081 + -2.1 668,081 + -0.7 668,081 + +2.4 668,081 + +1.9 668,081 + -1.0 668,081 + +0.9 668,082 - -0.5 668,082 - +1.2 668,366 - Echvi_0590 0.24 +1.5 668,402 + Echvi_0590 0.28 -1.4 668,403 - +2.5 668,411 + Echvi_0590 0.28 -2.3 668,411 + Echvi_0590 0.28 -2.8 668,443 - Echvi_0590 0.31 -2.7 669,211 - -0.5 669,214 - -1.1 669,214 - +1.0 669,219 - +2.3 669,770 - Echvi_0591 0.89 -0.8 669,770 - Echvi_0591 0.89 -1.0 669,770 - Echvi_0591 0.89 -2.4 669,805 - +0.2 669,805 - +2.5 669,805 - -2.3 669,823 - -1.1 669,838 - -2.0 669,838 - +1.1 669,838 - +4.4
Or see this region's nucleotide sequence