Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0361 and Echvi_0362 are separated by 297 nucleotides Echvi_0362 and Echvi_0363 are separated by 10 nucleotides
Echvi_0361: Echvi_0361 - hypothetical protein, at 388,436 to 389,359
_0361
Echvi_0362: Echvi_0362 - hypothetical protein, at 389,657 to 390,136
_0362
Echvi_0363: Echvi_0363 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1, at 390,147 to 391,259
_0363
Position (kb) 389
390
391 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 388.742 kb on + strand, within Echvi_0361 at 388.742 kb on + strand, within Echvi_0361 at 388.742 kb on + strand, within Echvi_0361 at 388.742 kb on + strand, within Echvi_0361 at 388.742 kb on + strand, within Echvi_0361 at 388.742 kb on + strand, within Echvi_0361 at 388.742 kb on + strand, within Echvi_0361 at 388.743 kb on - strand, within Echvi_0361 at 388.746 kb on + strand, within Echvi_0361 at 388.747 kb on - strand, within Echvi_0361 at 388.747 kb on - strand, within Echvi_0361 at 388.747 kb on - strand, within Echvi_0361 at 388.754 kb on - strand, within Echvi_0361 at 388.820 kb on - strand, within Echvi_0361 at 388.840 kb on - strand, within Echvi_0361 at 389.049 kb on + strand, within Echvi_0361 at 389.050 kb on - strand, within Echvi_0361 at 389.054 kb on - strand, within Echvi_0361 at 389.101 kb on - strand, within Echvi_0361 at 389.131 kb on - strand, within Echvi_0361 at 389.170 kb on + strand, within Echvi_0361 at 389.222 kb on + strand, within Echvi_0361 at 389.223 kb on - strand, within Echvi_0361 at 389.223 kb on - strand, within Echvi_0361 at 389.224 kb on + strand, within Echvi_0361 at 389.224 kb on + strand, within Echvi_0361 at 389.224 kb on + strand, within Echvi_0361 at 389.224 kb on + strand, within Echvi_0361 at 389.225 kb on - strand, within Echvi_0361 at 389.225 kb on - strand, within Echvi_0361 at 389.312 kb on + strand at 389.314 kb on + strand at 389.314 kb on + strand at 389.315 kb on - strand at 389.315 kb on - strand at 389.315 kb on - strand at 389.315 kb on - strand at 389.358 kb on - strand at 389.388 kb on - strand at 389.418 kb on + strand at 389.465 kb on - strand at 389.564 kb on + strand at 389.575 kb on - strand at 389.685 kb on - strand at 389.695 kb on + strand at 389.695 kb on + strand at 389.708 kb on - strand, within Echvi_0362 at 389.717 kb on + strand, within Echvi_0362 at 389.828 kb on + strand, within Echvi_0362 at 389.942 kb on - strand, within Echvi_0362 at 389.952 kb on + strand, within Echvi_0362 at 389.952 kb on + strand, within Echvi_0362 at 389.953 kb on - strand, within Echvi_0362 at 389.966 kb on + strand, within Echvi_0362 at 390.046 kb on + strand, within Echvi_0362 at 390.107 kb on - strand at 390.155 kb on + strand at 390.179 kb on + strand at 390.179 kb on + strand at 390.184 kb on + strand at 390.206 kb on - strand at 390.206 kb on - strand at 390.313 kb on + strand, within Echvi_0363 at 390.482 kb on + strand, within Echvi_0363 at 390.482 kb on + strand, within Echvi_0363 at 390.484 kb on + strand, within Echvi_0363 at 390.485 kb on - strand, within Echvi_0363 at 390.485 kb on - strand, within Echvi_0363 at 390.541 kb on - strand, within Echvi_0363 at 390.577 kb on + strand, within Echvi_0363 at 390.580 kb on + strand, within Echvi_0363 at 390.580 kb on + strand, within Echvi_0363 at 390.581 kb on - strand, within Echvi_0363 at 390.781 kb on + strand, within Echvi_0363 at 390.781 kb on + strand, within Echvi_0363 at 390.827 kb on + strand, within Echvi_0363 at 391.034 kb on - strand, within Echvi_0363 at 391.043 kb on + strand, within Echvi_0363 at 391.047 kb on + strand, within Echvi_0363 at 391.047 kb on + strand, within Echvi_0363 at 391.047 kb on + strand, within Echvi_0363 at 391.047 kb on + strand, within Echvi_0363 at 391.047 kb on + strand, within Echvi_0363 at 391.047 kb on + strand, within Echvi_0363 at 391.047 kb on + strand, within Echvi_0363 at 391.047 kb on + strand, within Echvi_0363 at 391.048 kb on - strand, within Echvi_0363 at 391.048 kb on - strand, within Echvi_0363 at 391.048 kb on - strand, within Echvi_0363 at 391.115 kb on + strand, within Echvi_0363 at 391.118 kb on - strand, within Echvi_0363 at 391.127 kb on - strand, within Echvi_0363
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 388,742 + Echvi_0361 0.33 +0.7 388,742 + Echvi_0361 0.33 -0.2 388,742 + Echvi_0361 0.33 -0.6 388,742 + Echvi_0361 0.33 +0.6 388,742 + Echvi_0361 0.33 -0.8 388,742 + Echvi_0361 0.33 +1.5 388,742 + Echvi_0361 0.33 +3.8 388,743 - Echvi_0361 0.33 +0.3 388,746 + Echvi_0361 0.34 -1.3 388,747 - Echvi_0361 0.34 +0.8 388,747 - Echvi_0361 0.34 -0.0 388,747 - Echvi_0361 0.34 -1.9 388,754 - Echvi_0361 0.34 -2.2 388,820 - Echvi_0361 0.42 +0.4 388,840 - Echvi_0361 0.44 +2.2 389,049 + Echvi_0361 0.66 -1.6 389,050 - Echvi_0361 0.66 +0.6 389,054 - Echvi_0361 0.67 -3.1 389,101 - Echvi_0361 0.72 -1.1 389,131 - Echvi_0361 0.75 +2.1 389,170 + Echvi_0361 0.79 -1.6 389,222 + Echvi_0361 0.85 +0.3 389,223 - Echvi_0361 0.85 -0.9 389,223 - Echvi_0361 0.85 -3.1 389,224 + Echvi_0361 0.85 +1.4 389,224 + Echvi_0361 0.85 -2.5 389,224 + Echvi_0361 0.85 -1.8 389,224 + Echvi_0361 0.85 -2.4 389,225 - Echvi_0361 0.85 +0.4 389,225 - Echvi_0361 0.85 +2.7 389,312 + +2.4 389,314 + +0.8 389,314 + +1.7 389,315 - +0.8 389,315 - -1.7 389,315 - -0.7 389,315 - -2.3 389,358 - +1.6 389,388 - +1.2 389,418 + -1.0 389,465 - -0.0 389,564 + +0.8 389,575 - +2.1 389,685 - -2.4 389,695 + +1.9 389,695 + +1.4 389,708 - Echvi_0362 0.11 -1.0 389,717 + Echvi_0362 0.12 +2.7 389,828 + Echvi_0362 0.36 +0.9 389,942 - Echvi_0362 0.59 -2.6 389,952 + Echvi_0362 0.61 +0.4 389,952 + Echvi_0362 0.61 +2.0 389,953 - Echvi_0362 0.62 +0.1 389,966 + Echvi_0362 0.64 +1.2 390,046 + Echvi_0362 0.81 +1.1 390,107 - -1.8 390,155 + +4.6 390,179 + +5.0 390,179 + +4.0 390,184 + +3.8 390,206 - +3.9 390,206 - +4.4 390,313 + Echvi_0363 0.15 +5.4 390,482 + Echvi_0363 0.30 +5.8 390,482 + Echvi_0363 0.30 +4.2 390,484 + Echvi_0363 0.30 +3.9 390,485 - Echvi_0363 0.30 +3.5 390,485 - Echvi_0363 0.30 +3.9 390,541 - Echvi_0363 0.35 +3.6 390,577 + Echvi_0363 0.39 +4.0 390,580 + Echvi_0363 0.39 +1.2 390,580 + Echvi_0363 0.39 +3.9 390,581 - Echvi_0363 0.39 +3.4 390,781 + Echvi_0363 0.57 +4.2 390,781 + Echvi_0363 0.57 +4.8 390,827 + Echvi_0363 0.61 +4.3 391,034 - Echvi_0363 0.80 +5.3 391,043 + Echvi_0363 0.81 +3.8 391,047 + Echvi_0363 0.81 +3.2 391,047 + Echvi_0363 0.81 +4.1 391,047 + Echvi_0363 0.81 +4.2 391,047 + Echvi_0363 0.81 +3.2 391,047 + Echvi_0363 0.81 +3.9 391,047 + Echvi_0363 0.81 +4.7 391,047 + Echvi_0363 0.81 +5.6 391,047 + Echvi_0363 0.81 +3.6 391,048 - Echvi_0363 0.81 +6.1 391,048 - Echvi_0363 0.81 +3.9 391,048 - Echvi_0363 0.81 +2.9 391,115 + Echvi_0363 0.87 +3.7 391,118 - Echvi_0363 0.87 +3.7 391,127 - Echvi_0363 0.88 +3.3
Or see this region's nucleotide sequence