Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0334 and Echvi_0335 are separated by 2 nucleotides Echvi_0335 and Echvi_0336 are separated by 156 nucleotides Echvi_0336 and Echvi_0337 are separated by 141 nucleotides
Echvi_0334: Echvi_0334 - hypothetical protein, at 351,720 to 357,350
_0334
Echvi_0335: Echvi_0335 - Uncharacterized protein conserved in bacteria, at 357,353 to 358,105
_0335
Echvi_0336: Echvi_0336 - rare lipoprotein A, at 358,262 to 358,624
_0336
Echvi_0337: Echvi_0337 - 3-phosphoglycerate kinase, at 358,766 to 359,965
_0337
Position (kb) 358
359 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 357.280 kb on + strand at 357.284 kb on + strand at 357.284 kb on + strand at 357.284 kb on + strand at 357.285 kb on - strand at 357.285 kb on - strand at 357.285 kb on - strand at 357.285 kb on - strand at 357.285 kb on - strand at 357.333 kb on - strand at 357.340 kb on + strand at 357.340 kb on + strand at 357.340 kb on + strand at 357.343 kb on + strand at 357.348 kb on + strand at 357.349 kb on - strand at 357.352 kb on + strand at 357.394 kb on + strand at 357.395 kb on - strand at 357.395 kb on - strand at 357.397 kb on + strand at 357.398 kb on - strand at 357.511 kb on + strand, within Echvi_0335 at 357.512 kb on - strand, within Echvi_0335 at 357.515 kb on - strand, within Echvi_0335 at 357.539 kb on + strand, within Echvi_0335 at 357.636 kb on - strand, within Echvi_0335 at 357.729 kb on - strand, within Echvi_0335 at 357.941 kb on + strand, within Echvi_0335 at 357.993 kb on - strand, within Echvi_0335 at 357.993 kb on - strand, within Echvi_0335 at 357.994 kb on + strand, within Echvi_0335 at 357.994 kb on + strand, within Echvi_0335 at 357.995 kb on - strand, within Echvi_0335 at 358.036 kb on - strand at 358.036 kb on - strand at 358.036 kb on - strand at 358.169 kb on + strand at 358.193 kb on + strand at 358.204 kb on + strand at 358.222 kb on + strand at 358.222 kb on + strand at 358.222 kb on + strand at 358.260 kb on - strand at 358.262 kb on - strand at 358.275 kb on + strand at 358.276 kb on - strand at 358.276 kb on - strand at 358.368 kb on - strand, within Echvi_0336 at 358.615 kb on - strand at 358.615 kb on - strand at 358.620 kb on - strand at 358.727 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 357,280 + +0.6 357,284 + +0.8 357,284 + -2.5 357,284 + -0.6 357,285 - -2.4 357,285 - +1.7 357,285 - -0.3 357,285 - +0.6 357,285 - +0.4 357,333 - -2.9 357,340 + +1.7 357,340 + +2.7 357,340 + +1.4 357,343 + -0.2 357,348 + -2.3 357,349 - -2.3 357,352 + +1.0 357,394 + -2.0 357,395 - -1.1 357,395 - -1.5 357,397 + -0.6 357,398 - +0.1 357,511 + Echvi_0335 0.21 -0.2 357,512 - Echvi_0335 0.21 -1.7 357,515 - Echvi_0335 0.22 +0.4 357,539 + Echvi_0335 0.25 -1.7 357,636 - Echvi_0335 0.38 +3.5 357,729 - Echvi_0335 0.50 -4.5 357,941 + Echvi_0335 0.78 -2.9 357,993 - Echvi_0335 0.85 -1.9 357,993 - Echvi_0335 0.85 -0.0 357,994 + Echvi_0335 0.85 -0.2 357,994 + Echvi_0335 0.85 -2.6 357,995 - Echvi_0335 0.85 -0.4 358,036 - -2.5 358,036 - -0.5 358,036 - +0.2 358,169 + -1.9 358,193 + +1.3 358,204 + +1.5 358,222 + +1.7 358,222 + -0.8 358,222 + -3.2 358,260 - -0.8 358,262 - +0.7 358,275 + -2.3 358,276 - +1.5 358,276 - -0.2 358,368 - Echvi_0336 0.29 -0.9 358,615 - -1.2 358,615 - -3.0 358,620 - +1.0 358,727 + +1.9
Or see this region's nucleotide sequence