Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0093

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
91,408	-				-0.4
91,426	+				-3.1
91,426	+				+0.4
91,671	+		Echvi_0092	0.26	-2.0
91,671	+		Echvi_0092	0.26	-2.4
91,673	+		Echvi_0092	0.26	-0.5
91,875	+		Echvi_0092	0.55	-0.4
91,876	-		Echvi_0092	0.55	+0.7
91,876	-		Echvi_0092	0.55	-2.5
91,953	+		Echvi_0092	0.66	-1.3
92,189	-				-1.6
92,223	-				+1.7
92,351	+				-1.3
92,352	-				-0.8
92,352	-				+0.7
92,352	-				-0.9
92,352	-				-0.6
92,365	+				-1.5
92,378	-				+0.6
92,412	-				+0.3
92,434	+				+2.0
92,447	+				+0.0
92,448	-				-2.4
92,448	-				-0.5
92,509	+		Echvi_0093	0.11	-2.1
92,515	-		Echvi_0093	0.11	-2.5
92,533	+		Echvi_0093	0.13	-1.7
92,557	-		Echvi_0093	0.15	-0.5
92,557	-		Echvi_0093	0.15	-0.7
92,687	+		Echvi_0093	0.26	-1.8
92,687	+		Echvi_0093	0.26	+0.8
92,688	-		Echvi_0093	0.26	-1.0
92,810	+		Echvi_0093	0.37	-0.5
93,068	+		Echvi_0093	0.60	-0.3
93,162	+		Echvi_0093	0.69	-0.5
93,163	-		Echvi_0093	0.69	+2.3
93,190	+		Echvi_0093	0.71	-1.4
93,218	+		Echvi_0093	0.74	-1.6
93,218	+		Echvi_0093	0.74	-0.7
93,218	+		Echvi_0093	0.74	+0.9
93,313	+		Echvi_0093	0.82	+0.9
93,376	+		Echvi_0093	0.88	-0.6
93,451	+				-0.8
93,467	+				+3.1
93,467	+				+0.7
93,467	+				+1.9
93,468	-				-2.7
93,497	+				-1.0
93,499	+				+2.8
93,499	+				-1.0
93,499	+				-1.5
93,500	-				-1.9
93,500	-				+1.3
93,500	-				-1.8
93,500	-				-0.9
93,500	-				+0.3
93,523	-				+0.2
93,566	+		Echvi_0094	0.10	-1.2
93,566	+		Echvi_0094	0.10	-0.8
93,567	-		Echvi_0094	0.10	-0.6
93,567	-		Echvi_0094	0.10	-0.8
93,567	-		Echvi_0094	0.10	+1.4
93,600	+		Echvi_0094	0.16	+0.8
93,601	-		Echvi_0094	0.16	+1.7
93,601	-		Echvi_0094	0.16	-1.0
93,601	-		Echvi_0094	0.16	+0.4
93,656	+		Echvi_0094	0.25	+0.2
93,684	-		Echvi_0094	0.30	-1.4
93,684	-		Echvi_0094	0.30	+1.5
93,697	+		Echvi_0094	0.32	+1.0
93,748	-		Echvi_0094	0.40	-0.5
93,831	-		Echvi_0094	0.54	-0.1
93,831	-		Echvi_0094	0.54	+2.0
93,902	-		Echvi_0094	0.66	-1.8
93,914	+		Echvi_0094	0.68	-1.3
93,914	+		Echvi_0094	0.68	-0.6
93,915	-		Echvi_0094	0.68	+0.0
93,930	+		Echvi_0094	0.70	+1.5
94,105	+				-3.1
94,105	+				+0.3
94,105	+				-0.8
94,114	-				-3.1
94,114	-				+0.3
94,124	+				+1.1
94,125	-				+3.5
94,129	-				-2.1
94,129	-				+0.3
94,212	+				-2.2
94,282	+		Echvi_0095	0.13	+1.8
94,283	-		Echvi_0095	0.13	+0.0
94,283	-		Echvi_0095	0.13	+0.7
94,302	+		Echvi_0095	0.15	+1.0
94,304	+		Echvi_0095	0.15	-1.8
94,304	+		Echvi_0095	0.15	-1.6
94,304	+		Echvi_0095	0.15	-1.6
94,304	+		Echvi_0095	0.15	+0.4
94,305	-		Echvi_0095	0.15	+1.6
94,305	-		Echvi_0095	0.15	+0.3