Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_93 and PfGW456L13_94 are separated by 21 nucleotides PfGW456L13_94 and PfGW456L13_95 are separated by 27 nucleotides
PfGW456L13_93 - ATP-binding region, ATPase-like:Histidine kinase A, N-terminal, at 108,433 to 109,560
_93
PfGW456L13_94 - Chaperone-modulator protein CbpM, at 109,582 to 109,887
_94
PfGW456L13_95 - DnaJ-class molecular chaperone CbpA, at 109,915 to 110,877
_95
Position (kb)
109
110 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 108.799 kb on + strand, within PfGW456L13_93 at 108.799 kb on + strand, within PfGW456L13_93 at 108.799 kb on + strand, within PfGW456L13_93 at 108.800 kb on - strand, within PfGW456L13_93 at 108.865 kb on + strand, within PfGW456L13_93 at 108.866 kb on - strand, within PfGW456L13_93 at 108.866 kb on - strand, within PfGW456L13_93 at 108.866 kb on - strand, within PfGW456L13_93 at 108.866 kb on - strand, within PfGW456L13_93 at 108.962 kb on + strand, within PfGW456L13_93 at 108.963 kb on - strand, within PfGW456L13_93 at 108.963 kb on - strand, within PfGW456L13_93 at 109.193 kb on + strand, within PfGW456L13_93 at 109.193 kb on + strand, within PfGW456L13_93 at 109.193 kb on + strand, within PfGW456L13_93 at 109.193 kb on + strand, within PfGW456L13_93 at 109.193 kb on + strand, within PfGW456L13_93 at 109.193 kb on + strand, within PfGW456L13_93 at 109.193 kb on + strand, within PfGW456L13_93 at 109.193 kb on + strand, within PfGW456L13_93 at 109.193 kb on + strand, within PfGW456L13_93 at 109.194 kb on - strand, within PfGW456L13_93 at 109.194 kb on - strand, within PfGW456L13_93 at 109.194 kb on - strand, within PfGW456L13_93 at 109.194 kb on - strand, within PfGW456L13_93 at 109.194 kb on - strand, within PfGW456L13_93 at 109.194 kb on - strand, within PfGW456L13_93 at 109.194 kb on - strand, within PfGW456L13_93 at 109.194 kb on - strand, within PfGW456L13_93 at 109.431 kb on + strand, within PfGW456L13_93 at 109.432 kb on - strand, within PfGW456L13_93 at 109.434 kb on + strand, within PfGW456L13_93 at 109.434 kb on + strand, within PfGW456L13_93 at 109.533 kb on + strand at 109.534 kb on - strand at 109.743 kb on - strand, within PfGW456L13_94 at 109.817 kb on + strand, within PfGW456L13_94 at 109.818 kb on - strand, within PfGW456L13_94 at 109.818 kb on - strand, within PfGW456L13_94 at 109.818 kb on - strand, within PfGW456L13_94 at 109.818 kb on - strand, within PfGW456L13_94 at 109.818 kb on - strand, within PfGW456L13_94 at 109.887 kb on + strand at 109.887 kb on + strand at 109.888 kb on - strand at 109.888 kb on - strand at 109.888 kb on - strand at 110.249 kb on + strand, within PfGW456L13_95 at 110.250 kb on - strand, within PfGW456L13_95 at 110.250 kb on - strand, within PfGW456L13_95 at 110.390 kb on + strand, within PfGW456L13_95 at 110.391 kb on - strand, within PfGW456L13_95 at 110.398 kb on + strand, within PfGW456L13_95 at 110.399 kb on - strand, within PfGW456L13_95 at 110.399 kb on - strand, within PfGW456L13_95 at 110.399 kb on - strand, within PfGW456L13_95 at 110.669 kb on + strand, within PfGW456L13_95 at 110.669 kb on + strand, within PfGW456L13_95 at 110.705 kb on + strand, within PfGW456L13_95 at 110.706 kb on - strand, within PfGW456L13_95 at 110.706 kb on - strand, within PfGW456L13_95 at 110.706 kb on - strand, within PfGW456L13_95 at 110.706 kb on - strand, within PfGW456L13_95 at 110.706 kb on - strand, within PfGW456L13_95 at 110.768 kb on + strand, within PfGW456L13_95 at 110.768 kb on + strand, within PfGW456L13_95 at 110.768 kb on + strand, within PfGW456L13_95 at 110.768 kb on + strand, within PfGW456L13_95 at 110.843 kb on + strand at 110.843 kb on + strand at 110.843 kb on + strand at 110.843 kb on + strand at 110.843 kb on + strand at 110.843 kb on + strand at 110.844 kb on - strand at 110.844 kb on - strand at 110.846 kb on + strand at 110.847 kb on - strand at 110.847 kb on - strand at 110.847 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 108,799 + PfGW456L13_93 0.32 +1.3 108,799 + PfGW456L13_93 0.32 +0.9 108,799 + PfGW456L13_93 0.32 +0.6 108,800 - PfGW456L13_93 0.33 +0.2 108,865 + PfGW456L13_93 0.38 +0.7 108,866 - PfGW456L13_93 0.38 +0.3 108,866 - PfGW456L13_93 0.38 +1.2 108,866 - PfGW456L13_93 0.38 +0.5 108,866 - PfGW456L13_93 0.38 -1.5 108,962 + PfGW456L13_93 0.47 -3.4 108,963 - PfGW456L13_93 0.47 -0.8 108,963 - PfGW456L13_93 0.47 -0.2 109,193 + PfGW456L13_93 0.67 +0.4 109,193 + PfGW456L13_93 0.67 +1.4 109,193 + PfGW456L13_93 0.67 -0.8 109,193 + PfGW456L13_93 0.67 +0.4 109,193 + PfGW456L13_93 0.67 -0.4 109,193 + PfGW456L13_93 0.67 +0.8 109,193 + PfGW456L13_93 0.67 +0.0 109,193 + PfGW456L13_93 0.67 -0.3 109,193 + PfGW456L13_93 0.67 -1.1 109,194 - PfGW456L13_93 0.67 +1.2 109,194 - PfGW456L13_93 0.67 -0.6 109,194 - PfGW456L13_93 0.67 -0.5 109,194 - PfGW456L13_93 0.67 +1.5 109,194 - PfGW456L13_93 0.67 +1.1 109,194 - PfGW456L13_93 0.67 +0.3 109,194 - PfGW456L13_93 0.67 +0.7 109,194 - PfGW456L13_93 0.67 -1.3 109,431 + PfGW456L13_93 0.88 +1.3 109,432 - PfGW456L13_93 0.89 -0.8 109,434 + PfGW456L13_93 0.89 -1.4 109,434 + PfGW456L13_93 0.89 +0.1 109,533 + +0.4 109,534 - +0.5 109,743 - PfGW456L13_94 0.53 -0.7 109,817 + PfGW456L13_94 0.77 -0.8 109,818 - PfGW456L13_94 0.77 +0.2 109,818 - PfGW456L13_94 0.77 -0.1 109,818 - PfGW456L13_94 0.77 -0.0 109,818 - PfGW456L13_94 0.77 +1.6 109,818 - PfGW456L13_94 0.77 +0.6 109,887 + +1.2 109,887 + -1.1 109,888 - -0.7 109,888 - +0.1 109,888 - +0.5 110,249 + PfGW456L13_95 0.35 -1.6 110,250 - PfGW456L13_95 0.35 +0.1 110,250 - PfGW456L13_95 0.35 -0.9 110,390 + PfGW456L13_95 0.49 -0.7 110,391 - PfGW456L13_95 0.49 -1.2 110,398 + PfGW456L13_95 0.50 +0.0 110,399 - PfGW456L13_95 0.50 -1.0 110,399 - PfGW456L13_95 0.50 +1.0 110,399 - PfGW456L13_95 0.50 -1.4 110,669 + PfGW456L13_95 0.78 +0.2 110,669 + PfGW456L13_95 0.78 -0.5 110,705 + PfGW456L13_95 0.82 +0.4 110,706 - PfGW456L13_95 0.82 -2.2 110,706 - PfGW456L13_95 0.82 -0.9 110,706 - PfGW456L13_95 0.82 +0.3 110,706 - PfGW456L13_95 0.82 -0.4 110,706 - PfGW456L13_95 0.82 +0.2 110,768 + PfGW456L13_95 0.89 -0.2 110,768 + PfGW456L13_95 0.89 -1.5 110,768 + PfGW456L13_95 0.89 -0.2 110,768 + PfGW456L13_95 0.89 -0.1 110,843 + +0.6 110,843 + -0.2 110,843 + +0.5 110,843 + +0.6 110,843 + +0.7 110,843 + +1.0 110,844 - +0.5 110,844 - -0.7 110,846 + -1.1 110,847 - +0.1 110,847 - +0.8 110,847 - +1.7
Or see this region's nucleotide sequence