Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2140

Experiment: m.b. D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.032 mg/ml
2,527,930	-		Echvi_2139	0.34	+0.0
2,527,930	-		Echvi_2139	0.34	-1.4
2,528,007	+		Echvi_2139	0.47	-1.2
2,528,115	+		Echvi_2139	0.65	-0.9
2,528,166	+		Echvi_2139	0.73	-0.7
2,528,166	+		Echvi_2139	0.73	+1.7
2,528,166	+		Echvi_2139	0.73	+0.5
2,528,166	+		Echvi_2139	0.73	-0.1
2,528,242	-		Echvi_2139	0.86	-0.0
2,528,274	+				-0.6
2,528,333	+				+0.7
2,528,334	-				+0.4
2,528,450	-				+1.7
2,528,454	-				-0.1
2,528,454	-				-2.2
2,528,454	-				-0.6
2,528,456	-				-0.2
2,528,456	-				+1.7
2,528,458	-				-1.1
2,528,458	-				+1.5
2,528,458	-				+0.2
2,528,460	-				+1.9
2,528,460	-				-0.2
2,528,475	+				-2.8
2,528,475	+				-2.7
2,528,475	+				-0.2
2,528,477	+				-0.3
2,528,552	-				+0.4
2,528,709	+		Echvi_2140	0.22	+1.5
2,528,710	-				-0.1
2,528,741	-		Echvi_2140	0.25	-1.4
2,528,779	+		Echvi_2140	0.29	-0.4
2,528,779	+		Echvi_2140	0.29	-0.8
2,528,788	-		Echvi_2140	0.30	-0.4
2,528,812	+		Echvi_2140	0.32	+0.7
2,528,813	-		Echvi_2140	0.32	-0.4
2,528,842	+		Echvi_2140	0.35	-1.3
2,528,846	-		Echvi_2140	0.35	-0.4
2,528,846	-		Echvi_2140	0.35	+0.1
2,528,872	-		Echvi_2140	0.38	-1.3
2,528,954	+		Echvi_2140	0.45	+0.3
2,528,977	-		Echvi_2140	0.48	+1.0
2,528,977	-		Echvi_2140	0.48	-0.2
2,528,977	-		Echvi_2140	0.48	+0.1
2,528,996	-		Echvi_2140	0.49	+0.9
2,528,996	-		Echvi_2140	0.49	-1.0
2,529,033	-		Echvi_2140	0.53	-0.2
2,529,043	-		Echvi_2140	0.54	-1.1
2,529,096	+		Echvi_2140	0.59	-0.3
2,529,096	+		Echvi_2140	0.59	-1.1
2,529,097	-		Echvi_2140	0.59	-0.7
2,529,177	+		Echvi_2140	0.67	+0.4
2,529,177	+		Echvi_2140	0.67	+0.1
2,529,177	+		Echvi_2140	0.67	-1.0
2,529,177	+		Echvi_2140	0.67	-0.1
2,529,178	-		Echvi_2140	0.67	-0.6
2,529,178	-		Echvi_2140	0.67	-0.4
2,529,178	-		Echvi_2140	0.67	-1.9
2,529,264	-				+1.7
2,529,265	+		Echvi_2140	0.75	-0.6
2,529,265	+		Echvi_2140	0.75	-0.6
2,529,266	-		Echvi_2140	0.75	-0.7
2,529,266	-		Echvi_2140	0.75	-0.4
2,529,277	-		Echvi_2140	0.76	+0.1
2,529,363	-		Echvi_2140	0.85	-0.6
2,529,363	-		Echvi_2140	0.85	-0.1
2,529,363	-		Echvi_2140	0.85	+0.4
2,529,483	-				-0.0
2,529,483	-				-0.6
2,529,485	-				-0.2
2,529,530	+				+0.1
2,529,534	+				+0.1
2,529,612	-				+0.6
2,529,660	-				-0.5
2,529,672	-				-2.3
2,529,681	+				-0.3
2,529,692	+				+0.6
2,529,693	-				+0.5
2,529,694	+				+1.1
2,529,711	+				+0.4
2,529,711	+				+2.0
2,529,711	+				+0.7
2,529,718	+				-0.6
2,529,720	+				-0.3
2,529,720	+				-0.4
2,529,720	+				+0.6
2,529,722	+				+0.9
2,529,722	+				+1.1
2,529,764	+				-0.5
2,529,764	+				+1.0
2,529,793	+				-1.1
2,529,856	+				-0.4
2,529,857	-				+1.4
2,529,887	+				-0.7
2,529,894	-				-0.2
2,529,941	+				-0.7
2,529,941	+				+0.1
2,529,942	-				+0.1
2,529,942	-				-0.0
2,529,966	-				-0.4
2,529,966	-				-0.5
2,529,987	-				+0.5
2,530,018	+				+0.7
2,530,033	-		Echvi_2141	0.10	-0.2
2,530,092	-		Echvi_2141	0.12	-0.5
2,530,149	-		Echvi_2141	0.14	-1.0
2,530,149	-		Echvi_2141	0.14	+0.2
2,530,158	-		Echvi_2141	0.14	-1.6
2,530,171	+		Echvi_2141	0.14	-0.3
2,530,171	+		Echvi_2141	0.14	-2.4
2,530,171	+		Echvi_2141	0.14	-0.8
2,530,172	-		Echvi_2141	0.14	-0.6
2,530,172	-		Echvi_2141	0.14	+1.5
2,530,172	-		Echvi_2141	0.14	+0.0
2,530,172	-		Echvi_2141	0.14	-1.9
2,530,213	+		Echvi_2141	0.16	-1.6
2,530,214	-		Echvi_2141	0.16	+0.6
2,530,236	+		Echvi_2141	0.16	-0.4
2,530,236	+		Echvi_2141	0.16	-1.6
2,530,236	+		Echvi_2141	0.16	-0.4
2,530,236	+		Echvi_2141	0.16	-0.7
2,530,236	+		Echvi_2141	0.16	+0.7
2,530,237	-		Echvi_2141	0.16	-0.9
2,530,237	-		Echvi_2141	0.16	-0.4
2,530,237	-		Echvi_2141	0.16	+1.2
2,530,237	-		Echvi_2141	0.16	-0.1
2,530,276	+		Echvi_2141	0.17	-0.6
2,530,277	-		Echvi_2141	0.17	-0.5
2,530,310	-		Echvi_2141	0.18	-0.7
2,530,357	+		Echvi_2141	0.20	-0.3
2,530,388	+		Echvi_2141	0.21	-0.4
2,530,460	+		Echvi_2141	0.23	-0.9
2,530,465	-		Echvi_2141	0.23	-1.9
2,530,465	-		Echvi_2141	0.23	+0.6
2,530,498	+		Echvi_2141	0.24	+0.1
2,530,520	+		Echvi_2141	0.24	-0.4
2,530,520	+		Echvi_2141	0.24	+0.1