Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1815

Experiment: m.b. D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.032 mg/ml
2,132,440	-				+0.5
2,132,440	-				+0.2
2,132,492	+				-0.0
2,132,512	+				-0.0
2,132,513	-				-0.0
2,132,513	-				-0.2
2,132,596	+		Echvi_1814	0.16	-0.0
2,132,620	+		Echvi_1814	0.19	+0.4
2,132,621	-		Echvi_1814	0.20	-0.1
2,132,665	+		Echvi_1814	0.26	-0.8
2,132,670	+		Echvi_1814	0.26	-0.2
2,132,670	+		Echvi_1814	0.26	-0.6
2,132,670	+		Echvi_1814	0.26	-0.6
2,132,754	+		Echvi_1814	0.38	+0.3
2,132,755	-		Echvi_1814	0.38	-1.4
2,132,828	+		Echvi_1814	0.48	+0.6
2,132,846	-		Echvi_1814	0.51	+0.1
2,132,846	-		Echvi_1814	0.51	+0.3
2,132,961	+		Echvi_1814	0.67	-0.2
2,132,961	+		Echvi_1814	0.67	+0.3
2,132,961	+		Echvi_1814	0.67	-0.6
2,132,961	+		Echvi_1814	0.67	+0.8
2,133,015	+		Echvi_1814	0.74	-1.1
2,133,016	-		Echvi_1814	0.74	-0.4
2,133,016	-		Echvi_1814	0.74	-1.7
2,133,032	+		Echvi_1814	0.77	+0.0
2,133,032	+		Echvi_1814	0.77	+0.0
2,133,033	-		Echvi_1814	0.77	+0.1
2,133,119	-		Echvi_1814	0.89	+0.3
2,133,145	+				-0.5
2,133,146	-				-0.1
2,133,146	-				+0.1
2,133,146	-				-0.4
2,133,151	+				-1.2
2,133,152	-				-0.8
2,133,162	-				-1.9
2,133,243	-				-0.4
2,133,258	-				+0.7
2,133,370	+		Echvi_1815	0.14	-0.7
2,133,370	+		Echvi_1815	0.14	-2.0
2,133,370	+		Echvi_1815	0.14	+0.8
2,133,373	-		Echvi_1815	0.14	-1.2
2,133,373	-		Echvi_1815	0.14	-1.1
2,133,518	+		Echvi_1815	0.25	-0.3
2,133,542	-		Echvi_1815	0.27	-1.3
2,133,560	-		Echvi_1815	0.28	+0.4
2,133,617	+		Echvi_1815	0.32	-0.7
2,133,618	-		Echvi_1815	0.32	+0.5
2,133,806	-		Echvi_1815	0.46	+1.0
2,133,825	+		Echvi_1815	0.48	-1.3
2,133,939	+		Echvi_1815	0.56	-1.0
2,133,940	-		Echvi_1815	0.56	-0.2
2,133,968	-		Echvi_1815	0.58	+0.4
2,134,006	+		Echvi_1815	0.61	-1.6
2,134,191	-		Echvi_1815	0.75	-0.2
2,134,313	+		Echvi_1815	0.84	+0.1
2,134,330	+		Echvi_1815	0.85	-0.6
2,134,330	+		Echvi_1815	0.85	-1.5
2,134,331	-		Echvi_1815	0.85	-0.8
2,134,331	-		Echvi_1815	0.85	-2.9
2,134,366	+		Echvi_1815	0.88	+1.1
2,134,366	+		Echvi_1815	0.88	-0.4
2,134,366	+		Echvi_1815	0.88	+0.5
2,134,366	+		Echvi_1815	0.88	+0.1
2,134,436	+				-0.2
2,134,552	+				+0.2
2,134,553	-				+0.5
2,134,553	-				-0.1
2,134,553	-				+0.9
2,134,571	-				+0.6
2,134,656	+				+0.8
2,134,657	-				+0.1
2,134,661	+				-0.5
2,134,697	+				+0.4
2,134,698	-				-0.5
2,134,744	-				+0.1
2,134,744	-				-0.1
2,134,744	-				-0.9
2,134,769	+				+0.8
2,134,770	-				-0.4
2,134,770	-				+0.1
2,134,772	+				-0.9
2,134,772	+				+0.2
2,134,773	-				-0.7
2,134,781	+				+1.0
2,134,800	+		Echvi_1816	0.12	-0.5
2,134,855	+		Echvi_1816	0.23	+0.6
2,134,855	+		Echvi_1816	0.23	+0.0
2,134,959	-		Echvi_1816	0.45	+1.3
2,135,107	+		Echvi_1816	0.75	-0.5
2,135,116	-		Echvi_1816	0.77	+0.6
2,135,142	-		Echvi_1816	0.82	-0.0
2,135,195	+				-1.5
2,135,202	+				-0.7
2,135,216	+				-0.7
2,135,216	+				+1.6
2,135,217	-				+0.3
2,135,217	-				-1.1
2,135,217	-				-0.2
2,135,224	+				+1.2
2,135,225	-				-1.0
2,135,236	+				-0.6
2,135,236	+				+0.8
2,135,236	+				-1.2
2,135,237	-				-0.2
2,135,251	+				+1.8
2,135,251	+				+0.4
2,135,251	+				-0.5
2,135,259	+				-0.1
2,135,269	+				+0.8
2,135,269	+				+0.1
2,135,292	-				-0.9
2,135,315	+		Echvi_1817	0.13	-1.2
2,135,316	-		Echvi_1817	0.13	-1.1
2,135,339	+		Echvi_1817	0.16	+0.6
2,135,339	+		Echvi_1817	0.16	-0.2
2,135,340	-		Echvi_1817	0.16	-0.1
2,135,340	-		Echvi_1817	0.16	+0.8
2,135,348	-		Echvi_1817	0.18	-1.0
2,135,428	-		Echvi_1817	0.30	+0.9
2,135,494	-		Echvi_1817	0.40	-1.2