Strain Fitness in Escherichia coli BW25113 around b4072

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
4,286,846	+	nrfA	b4070	0.74	-1.5
4,286,954	+	nrfA	b4070	0.81	+0.5
4,286,962	-	nrfA	b4070	0.82	-0.5
4,286,965	-	nrfA	b4070	0.82	-0.3
4,286,965	-	nrfA	b4070	0.82	-0.1
4,287,004	+	nrfA	b4070	0.85	-1.2
4,287,058	-	nrfA	b4070	0.88	+0.7
4,287,119	+				-0.6
4,287,149	+				+0.0
4,287,223	+				+0.5
4,287,250	+				+0.5
4,287,250	+				+0.5
4,287,250	+				-0.3
4,287,258	-				-1.2
4,287,262	+				-0.1
4,287,301	+				+0.1
4,287,301	+				-0.4
4,287,308	+				-0.9
4,287,313	+				-1.2
4,287,313	+				+0.1
4,287,328	-	nrfB	b4071	0.11	-0.2
4,287,534	-	nrfB	b4071	0.47	-0.3
4,287,560	+	nrfB	b4071	0.51	+0.1
4,287,560	+	nrfB	b4071	0.51	-0.2
4,287,582	-	nrfB	b4071	0.55	-0.0
4,287,591	+	nrfB	b4071	0.57	-0.5
4,287,619	-	nrfB	b4071	0.62	+0.4
4,287,718	+	nrfB	b4071	0.79	+2.1
4,287,823	-				+0.1
4,287,823	-				+0.1
4,287,836	-				+1.8
4,287,836	-				+0.2
4,287,905	-	nrfC	b4072	0.11	-0.6
4,287,970	-	nrfC	b4072	0.21	+2.1
4,287,981	-	nrfC	b4072	0.22	+0.8
4,287,985	+	nrfC	b4072	0.23	-0.0
4,288,125	-	nrfC	b4072	0.44	-0.3
4,288,153	-	nrfC	b4072	0.48	+0.4
4,288,182	+	nrfC	b4072	0.52	-0.0
4,288,182	+	nrfC	b4072	0.52	+0.2
4,288,212	+	nrfC	b4072	0.57	+0.1
4,288,212	+	nrfC	b4072	0.57	-0.4
4,288,220	-	nrfC	b4072	0.58	-0.9
4,288,322	+	nrfC	b4072	0.73	-0.2
4,288,458	+				-1.2
4,288,465	+				-0.2
4,288,465	+				-0.8
4,288,465	+				-0.0
4,288,465	+				-0.0
4,288,543	-				-0.6
4,288,617	-	nrfD	b4073	0.12	-0.7
4,288,617	-	nrfD	b4073	0.12	-0.4
4,288,650	-	nrfD	b4073	0.16	-0.1
4,288,650	-	nrfD	b4073	0.16	+0.7
4,288,655	-	nrfD	b4073	0.16	+1.2
4,288,732	+	nrfD	b4073	0.24	+0.5
4,288,740	+	nrfD	b4073	0.25	+0.2
4,288,804	+	nrfD	b4073	0.32	+0.7
4,288,804	+	nrfD	b4073	0.32	+0.7
4,288,807	+	nrfD	b4073	0.32	-0.1
4,288,825	-	nrfD	b4073	0.34	+0.1
4,288,825	-	nrfD	b4073	0.34	+0.2
4,288,888	+	nrfD	b4073	0.41	-0.5
4,288,972	+	nrfD	b4073	0.49	+0.1
4,288,972	+	nrfD	b4073	0.49	+0.3
4,288,978	+	nrfD	b4073	0.50	-0.3
4,288,978	+	nrfD	b4073	0.50	+0.4
4,289,100	-	nrfD	b4073	0.63	+0.1
4,289,154	+	nrfD	b4073	0.68	-0.5
4,289,154	+				+1.1
4,289,163	+	nrfD	b4073	0.69	-1.2
4,289,170	+	nrfD	b4073	0.70	-1.1
4,289,170	+	nrfD	b4073	0.70	-0.9
4,289,324	+	nrfD	b4073	0.86	-0.3
4,289,324	+	nrfD	b4073	0.86	-0.5
4,289,324	+	nrfD	b4073	0.86	-1.7
4,289,361	+				+0.7
4,289,380	+				+0.6