Strain Fitness in Escherichia coli BW25113 around b3754

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
3,936,338	-				-0.3
3,936,338	-				+0.1
3,936,395	+	rbsR	b3753	0.15	-0.6
3,936,407	+	rbsR	b3753	0.16	+0.3
3,936,415	-	rbsR	b3753	0.17	+0.1
3,936,444	-	rbsR	b3753	0.20	-0.2
3,936,447	-	rbsR	b3753	0.20	-1.8
3,936,456	+	rbsR	b3753	0.21	+0.2
3,936,456	+	rbsR	b3753	0.21	+0.6
3,936,463	-	rbsR	b3753	0.21	-1.2
3,936,470	+	rbsR	b3753	0.22	-0.2
3,936,470	+	rbsR	b3753	0.22	+0.6
3,936,473	-	rbsR	b3753	0.22	-0.8
3,936,473	-	rbsR	b3753	0.22	+0.1
3,936,496	-	rbsR	b3753	0.25	-0.8
3,936,496	-	rbsR	b3753	0.25	+0.1
3,936,545	+	rbsR	b3753	0.30	-0.8
3,936,659	+	rbsR	b3753	0.41	-0.4
3,936,667	+	rbsR	b3753	0.42	-0.4
3,936,667	+	rbsR	b3753	0.42	-1.4
3,936,667	+	rbsR	b3753	0.42	-0.2
3,936,684	-	rbsR	b3753	0.44	-0.4
3,936,684	-	rbsR	b3753	0.44	+0.1
3,936,686	+	rbsR	b3753	0.44	-1.2
3,936,723	-	rbsR	b3753	0.48	-1.2
3,936,726	-	rbsR	b3753	0.48	-1.3
3,936,763	-	rbsR	b3753	0.52	-0.3
3,936,769	+	rbsR	b3753	0.52	+0.5
3,936,794	+	rbsR	b3753	0.55	-0.4
3,936,842	-	rbsR	b3753	0.60	-1.6
3,936,868	+	rbsR	b3753	0.62	+0.2
3,936,868	+	rbsR	b3753	0.62	-0.4
3,936,868	+	rbsR	b3753	0.62	+0.5
3,936,875	+	rbsR	b3753	0.63	-1.9
3,936,876	-	rbsR	b3753	0.63	-0.7
3,936,876	-	rbsR	b3753	0.63	-0.4
3,936,878	+	rbsR	b3753	0.63	-1.5
3,936,878	+	rbsR	b3753	0.63	+0.1
3,936,943	+	rbsR	b3753	0.70	+0.5
3,936,953	-	rbsR	b3753	0.71	-0.3
3,936,953	-	rbsR	b3753	0.71	+1.1
3,936,989	+	rbsR	b3753	0.74	-1.1
3,936,989	+	rbsR	b3753	0.74	-1.5
3,936,990	+	rbsR	b3753	0.75	+0.9
3,936,992	+	rbsR	b3753	0.75	+0.1
3,937,039	+	rbsR	b3753	0.79	-0.4
3,937,055	-	rbsR	b3753	0.81	-1.1
3,937,101	+	rbsR	b3753	0.86	-0.7
3,937,124	-	rbsR	b3753	0.88	-0.4
3,937,124	-	rbsR	b3753	0.88	+0.3
3,937,130	-	rbsR	b3753	0.89	+0.8
3,937,137	+	rbsR	b3753	0.89	+0.2
3,937,174	+				+0.1
3,937,174	+				-1.7
3,937,177	-				-2.4
3,937,184	-				+0.3
3,937,186	+				-0.9
3,937,186	+				-0.3
3,937,201	+				-0.3
3,937,205	+				-0.4
3,937,244	-				+0.1
3,937,244	-				-0.4
3,937,312	-				+0.4
3,937,318	-				+0.1
3,937,318	-				+1.1
3,937,342	-				+0.1
3,937,365	+	hsrA	b3754	0.11	+0.9
3,937,373	+	hsrA	b3754	0.12	+0.6
3,937,406	+	hsrA	b3754	0.14	+0.1
3,937,418	+	hsrA	b3754	0.15	+0.3
3,937,458	+	hsrA	b3754	0.18	+0.1
3,937,458	-	hsrA	b3754	0.18	-0.0
3,937,467	+	hsrA	b3754	0.18	+0.4
3,937,470	-	hsrA	b3754	0.18	+0.4
3,937,470	-	hsrA	b3754	0.18	+1.1
3,937,498	+	hsrA	b3754	0.20	+0.7
3,937,506	+	hsrA	b3754	0.21	+0.7
3,937,506	-	hsrA	b3754	0.21	+1.7
3,937,506	-	hsrA	b3754	0.21	-0.1
3,937,511	-	hsrA	b3754	0.21	-0.8
3,937,523	-	hsrA	b3754	0.22	+0.5
3,937,533	-	hsrA	b3754	0.23	+0.5
3,937,533	-	hsrA	b3754	0.23	+0.2
3,937,541	+	hsrA	b3754	0.23	-0.7
3,937,549	-	hsrA	b3754	0.24	-0.7
3,937,570	-	hsrA	b3754	0.25	+0.8
3,937,570	-	hsrA	b3754	0.25	+0.4
3,937,579	-	hsrA	b3754	0.26	+0.4
3,937,579	-	hsrA	b3754	0.26	+1.3
3,937,592	-	hsrA	b3754	0.27	-0.5
3,937,592	-	hsrA	b3754	0.27	-1.1
3,937,596	+	hsrA	b3754	0.27	+1.1
3,937,630	+	hsrA	b3754	0.30	-1.9
3,937,647	-	hsrA	b3754	0.31	+0.4
3,937,647	-	hsrA	b3754	0.31	+0.9
3,937,651	+	hsrA	b3754	0.31	+0.8
3,937,654	-	hsrA	b3754	0.31	+0.1
3,937,665	-	hsrA	b3754	0.32	+0.8
3,937,667	+	hsrA	b3754	0.32	+1.1
3,937,725	+	hsrA	b3754	0.36	+0.4
3,937,759	+	hsrA	b3754	0.39	+0.6
3,937,789	+	hsrA	b3754	0.41	+0.3
3,937,789	+	hsrA	b3754	0.41	+1.5
3,937,792	+	hsrA	b3754	0.41	+0.8
3,937,792	+	hsrA	b3754	0.41	+0.5
3,937,792	+	hsrA	b3754	0.41	-0.5
3,937,797	-	hsrA	b3754	0.41	+0.6
3,937,797	-	hsrA	b3754	0.41	+0.1
3,937,800	-	hsrA	b3754	0.41	-0.7
3,937,800	-	hsrA	b3754	0.41	+1.3
3,937,800	-	hsrA	b3754	0.41	+0.3
3,937,832	-	hsrA	b3754	0.44	-0.3
3,937,995	-	hsrA	b3754	0.55	+0.2
3,937,995	-	hsrA	b3754	0.55	-0.3
3,938,052	-	hsrA	b3754	0.59	+1.6
3,938,059	+	hsrA	b3754	0.60	+0.3
3,938,059	+	hsrA	b3754	0.60	-0.8
3,938,106	+	hsrA	b3754	0.63	+0.1
3,938,106	+	hsrA	b3754	0.63	-0.7
3,938,149	-	hsrA	b3754	0.66	+0.6
3,938,154	+	hsrA	b3754	0.66	+1.3
3,938,207	-	hsrA	b3754	0.70	+0.7
3,938,259	-	hsrA	b3754	0.74	+1.0
3,938,269	-	hsrA	b3754	0.74	+1.1
3,938,285	+	hsrA	b3754	0.75	-0.7
3,938,285	+	hsrA	b3754	0.75	+1.1
3,938,306	+	hsrA	b3754	0.77	+1.5
3,938,306	+	hsrA	b3754	0.77	-0.2
3,938,368	-	hsrA	b3754	0.81	+0.6
3,938,370	-	hsrA	b3754	0.81	+0.1
3,938,373	+	hsrA	b3754	0.82	-0.1
3,938,377	-	hsrA	b3754	0.82	-0.3
3,938,475	-	hsrA	b3754	0.89	-0.5
3,938,495	+				+0.3
3,938,505	-				-0.3
3,938,505	-				+0.6
3,938,509	+				-0.7
3,938,509	+				+0.5
3,938,563	-				+0.1
3,938,586	+				-0.6
3,938,597	+				+0.2
3,938,610	+				+0.7
3,938,610	+				-0.3
3,938,610	+				+0.2
3,938,628	-				+0.5
3,938,646	+				+1.2
3,938,646	+				-0.9
3,938,654	-				-0.1
3,938,657	+				+0.4
3,938,657	+				+0.4
3,938,666	-				+1.4
3,938,666	-				-0.0
3,938,668	+				+0.1
3,938,668	+				+0.9
3,938,673	+				+0.7
3,938,715	+				+1.1
3,938,753	-	yieP	b3755	0.14	+1.3
3,938,758	-	yieP	b3755	0.14	+0.2
3,938,765	-	yieP	b3755	0.15	+0.1
3,938,773	+	yieP	b3755	0.17	+0.3
3,938,819	-	yieP	b3755	0.23	-0.3
3,938,944	+	yieP	b3755	0.41	+0.3
3,938,944	+	yieP	b3755	0.41	-0.7
3,938,954	-	yieP	b3755	0.43	+0.6
3,938,979	-	yieP	b3755	0.46	+0.2
3,938,979	-	yieP	b3755	0.46	+0.7
3,939,037	-	yieP	b3755	0.55	+0.1
3,939,068	+	yieP	b3755	0.59	+0.6
3,939,072	-	yieP	b3755	0.60	-1.5
3,939,072	-	yieP	b3755	0.60	+1.1
3,939,190	-	yieP	b3755	0.77	-1.6
3,939,194	+	yieP	b3755	0.77	+0.0
3,939,390	+				+1.1
3,939,398	-				-0.8
3,939,400	+				+0.5
3,939,410	-				-1.8
3,939,410	-				+0.5